BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP13_F_K10
(648 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY051457-1|AAK92881.1| 236|Drosophila melanogaster GH12681p pro... 104 1e-22
AE013599-980|AAF58867.1| 236|Drosophila melanogaster CG12131-PA... 104 1e-22
AY051941-1|AAK93365.1| 565|Drosophila melanogaster LD41932p pro... 32 0.77
AE014298-1695|AAF48098.2| 1168|Drosophila melanogaster CG32662-P... 32 0.77
M59076-1|AAA28679.1| 1302|Drosophila melanogaster P glycoprotein... 28 9.5
AY058791-1|AAL14020.1| 1302|Drosophila melanogaster SD10012p pro... 28 9.5
AE013599-1620|AAF58437.2| 1302|Drosophila melanogaster CG3879-PA... 28 9.5
>AY051457-1|AAK92881.1| 236|Drosophila melanogaster GH12681p
protein.
Length = 236
Score = 104 bits (249), Expect = 1e-22
Identities = 59/167 (35%), Positives = 85/167 (50%)
Frame = +3
Query: 147 PTTLAASNKWEGEDEDDNVXXXXXXXXXXXXXXXXXXAAXXXXXXXXXXIHDKIXXXXXX 326
PT A+ NKWEGEDED+++ + K+
Sbjct: 17 PTAAASVNKWEGEDEDEDIKDSWEDEEEKKDEEKPTKTEAPAKPKPNKALKAKLEQQALL 76
Query: 327 XXXXXXXLVTEKTAEEMTPEQKLAEKLRQQKLQEESDLRLAMETFGVTEGNIGKLDNFHP 506
K ++P +KLAEKLR QK+QE SDL+ A E FGVT G LD F+P
Sbjct: 77 EEE-----AEAKRLANLSPAEKLAEKLRLQKIQEASDLKHAQEAFGVTS-TCGGLDAFNP 130
Query: 507 TTKEEYTEFADLLTKKITFYKAKDEFPGFIDDLVKNILVXMSSADIR 647
TKEE+ EF L+ K+ ++ + FP F++DLV+++ V +S+ADI+
Sbjct: 131 ETKEEFKEFGATLSWKVGQFRESEHFPQFVEDLVRSLCVNLSAADIK 177
>AE013599-980|AAF58867.1| 236|Drosophila melanogaster CG12131-PA
protein.
Length = 236
Score = 104 bits (249), Expect = 1e-22
Identities = 59/167 (35%), Positives = 85/167 (50%)
Frame = +3
Query: 147 PTTLAASNKWEGEDEDDNVXXXXXXXXXXXXXXXXXXAAXXXXXXXXXXIHDKIXXXXXX 326
PT A+ NKWEGEDED+++ + K+
Sbjct: 17 PTAAASVNKWEGEDEDEDIKDSWEDEEEKKDEEKPTKTEAPAKPKPNKALKAKLEQQALL 76
Query: 327 XXXXXXXLVTEKTAEEMTPEQKLAEKLRQQKLQEESDLRLAMETFGVTEGNIGKLDNFHP 506
K ++P +KLAEKLR QK+QE SDL+ A E FGVT G LD F+P
Sbjct: 77 EEE-----AEAKRLANLSPAEKLAEKLRLQKIQEASDLKHAQEAFGVTS-TCGGLDAFNP 130
Query: 507 TTKEEYTEFADLLTKKITFYKAKDEFPGFIDDLVKNILVXMSSADIR 647
TKEE+ EF L+ K+ ++ + FP F++DLV+++ V +S+ADI+
Sbjct: 131 ETKEEFKEFGATLSWKVGQFRESEHFPQFVEDLVRSLCVNLSAADIK 177
>AY051941-1|AAK93365.1| 565|Drosophila melanogaster LD41932p
protein.
Length = 565
Score = 31.9 bits (69), Expect = 0.77
Identities = 18/38 (47%), Positives = 25/38 (65%), Gaps = 1/38 (2%)
Frame = +3
Query: 348 LVTEKTAEEMTPEQKLAEKLRQQKLQE-ESDLRLAMET 458
L+ +K EE E+KL EK RQ+KL+E E + +L ET
Sbjct: 42 LLKKKEKEEKEREEKLKEKERQEKLKEKEREEKLKRET 79
>AE014298-1695|AAF48098.2| 1168|Drosophila melanogaster CG32662-PA
protein.
Length = 1168
Score = 31.9 bits (69), Expect = 0.77
Identities = 18/38 (47%), Positives = 25/38 (65%), Gaps = 1/38 (2%)
Frame = +3
Query: 348 LVTEKTAEEMTPEQKLAEKLRQQKLQE-ESDLRLAMET 458
L+ +K EE E+KL EK RQ+KL+E E + +L ET
Sbjct: 645 LLKKKEKEEKEREEKLKEKERQEKLKEKEREEKLKRET 682
>M59076-1|AAA28679.1| 1302|Drosophila melanogaster P glycoprotein
protein.
Length = 1302
Score = 28.3 bits (60), Expect = 9.5
Identities = 20/67 (29%), Positives = 31/67 (46%), Gaps = 4/67 (5%)
Frame = -3
Query: 559 VIFFVRRSANSVYSSFVVGWKLS--SLPMLPSVTPKVSMASRKSDSSCSFCWRSFS--AN 392
V+F + + S+FV GWKL+ L +P + S+ +R S +S+S AN
Sbjct: 197 VVFLIMTFVIGIVSAFVYGWKLTLVVLSCVPFIIAATSVVARLQGSLAEKELKSYSDAAN 256
Query: 391 FCSGVIS 371
V S
Sbjct: 257 VVEEVFS 263
>AY058791-1|AAL14020.1| 1302|Drosophila melanogaster SD10012p
protein.
Length = 1302
Score = 28.3 bits (60), Expect = 9.5
Identities = 20/67 (29%), Positives = 31/67 (46%), Gaps = 4/67 (5%)
Frame = -3
Query: 559 VIFFVRRSANSVYSSFVVGWKLS--SLPMLPSVTPKVSMASRKSDSSCSFCWRSFS--AN 392
V+F + + S+FV GWKL+ L +P + S+ +R S +S+S AN
Sbjct: 197 VVFLIMTFVIGIVSAFVYGWKLTLVVLSCVPFIIAATSVVARLQGSLAEKELKSYSDAAN 256
Query: 391 FCSGVIS 371
V S
Sbjct: 257 VVEEVFS 263
>AE013599-1620|AAF58437.2| 1302|Drosophila melanogaster CG3879-PA
protein.
Length = 1302
Score = 28.3 bits (60), Expect = 9.5
Identities = 20/67 (29%), Positives = 31/67 (46%), Gaps = 4/67 (5%)
Frame = -3
Query: 559 VIFFVRRSANSVYSSFVVGWKLS--SLPMLPSVTPKVSMASRKSDSSCSFCWRSFS--AN 392
V+F + + S+FV GWKL+ L +P + S+ +R S +S+S AN
Sbjct: 197 VVFLIMTFVIGIVSAFVYGWKLTLVVLSCVPFIIAATSVVARLQGSLAEKELKSYSDAAN 256
Query: 391 FCSGVIS 371
V S
Sbjct: 257 VVEEVFS 263
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,278,055
Number of Sequences: 53049
Number of extensions: 379543
Number of successful extensions: 1427
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1363
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1425
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2744900550
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -