Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP13_F_K08
(490 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X13916-1|CAA32112.1| 4544|Homo sapiens LDL-receptor related prec... 30 3.7
DQ314873-1|ABC40732.1| 4544|Homo sapiens low density lipoprotein... 30 3.7
AF058427-1|AAC64265.1| 4544|Homo sapiens lipoprotein receptor-re... 30 3.7
Y13613-1|CAA73934.1| 436|Homo sapiens Prep-1 protein. 30 4.9
U68727-1|AAC51243.1| 435|Homo sapiens homeobox-containing prote... 30 4.9
BC063829-1|AAH63829.1| 1664|Homo sapiens peroxisome proliferator... 30 4.9
BC007746-1|AAH07746.1| 436|Homo sapiens PBX/knotted 1 homeobox ... 30 4.9
BC002561-1|AAH02561.2| 659|Homo sapiens PPRC1 protein protein. 30 4.9
BC000735-1|AAH00735.1| 336|Homo sapiens PKNOX1 protein protein. 30 4.9
AY566249-1|AAT70235.1| 218|Homo sapiens pkonx1c protein. 30 4.9
AY196965-1|AAO45825.1| 436|Homo sapiens homeobox-containing pro... 30 4.9
AY142115-1|AAN34940.1| 405|Homo sapiens PKNOX1B protein. 30 4.9
AP001748-1|BAA95533.1| 435|Homo sapiens homeobox-containing pro... 30 4.9
AL500527-6|CAH72219.1| 631|Homo sapiens peroxisome proliferator... 30 4.9
AL500527-5|CAH72218.1| 1664|Homo sapiens peroxisome proliferator... 30 4.9
AK222892-1|BAD96612.1| 436|Homo sapiens PBX/knotted 1 homeobox ... 30 4.9
AF325193-1|AAK11573.1| 1664|Homo sapiens PGC-1 related co-activa... 30 4.9
AB011167-1|BAA25521.2| 1666|Homo sapiens KIAA0595 protein protein. 30 4.9
>X13916-1|CAA32112.1| 4544|Homo sapiens LDL-receptor related precursor
(AA -19 to 4525) protein.
Length = 4544
Score = 30.3 bits (65), Expect = 3.7
Identities = 21/67 (31%), Positives = 32/67 (47%), Gaps = 5/67 (7%)
Frame = -1
Query: 355 VGVDIQASTDNSSALHDDLVTVSRSSRNAV--QDFDRQNVAQVERVEVNRILGVAFYW-- 188
VG+D A D + L T+SR+ R+ +D + +VE + V+ I G YW
Sbjct: 1925 VGIDFHAENDTIYWVDMGLSTISRAKRDQTWREDVVTNGIGRVEGIAVDWIAG-NIYWTD 1983
Query: 187 -GFGALE 170
GF +E
Sbjct: 1984 QGFDVIE 1990
>DQ314873-1|ABC40732.1| 4544|Homo sapiens low density
lipoprotein-related protein 1 (alpha-2-macroglobulin
receptor) protein.
Length = 4544
Score = 30.3 bits (65), Expect = 3.7
Identities = 21/67 (31%), Positives = 32/67 (47%), Gaps = 5/67 (7%)
Frame = -1
Query: 355 VGVDIQASTDNSSALHDDLVTVSRSSRNAV--QDFDRQNVAQVERVEVNRILGVAFYW-- 188
VG+D A D + L T+SR+ R+ +D + +VE + V+ I G YW
Sbjct: 1925 VGIDFHAENDTIYWVDMGLSTISRAKRDQTWREDVVTNGIGRVEGIAVDWIAG-NIYWTD 1983
Query: 187 -GFGALE 170
GF +E
Sbjct: 1984 QGFDVIE 1990
>AF058427-1|AAC64265.1| 4544|Homo sapiens lipoprotein receptor-related
protein protein.
Length = 4544
Score = 30.3 bits (65), Expect = 3.7
Identities = 21/67 (31%), Positives = 32/67 (47%), Gaps = 5/67 (7%)
Frame = -1
Query: 355 VGVDIQASTDNSSALHDDLVTVSRSSRNAV--QDFDRQNVAQVERVEVNRILGVAFYW-- 188
VG+D A D + L T+SR+ R+ +D + +VE + V+ I G YW
Sbjct: 1925 VGIDFHAENDTIYWVDMGLSTISRAKRDQTWREDVVTNGIGRVEGIAVDWIAG-NIYWTD 1983
Query: 187 -GFGALE 170
GF +E
Sbjct: 1984 QGFDVIE 1990
>Y13613-1|CAA73934.1| 436|Homo sapiens Prep-1 protein.
Length = 436
Score = 29.9 bits (64), Expect = 4.9
Identities = 14/47 (29%), Positives = 23/47 (48%), Gaps = 2/47 (4%)
Frame = +2
Query: 131 QCNSEQDKNCGDPFKS--AKPPVECNTQDSINFNTLYLRNILPVEVL 265
+ +EQD NC +P + PPVE T ++ +Y + P+ L
Sbjct: 23 ELKTEQDPNCSEPDAEGVSPPPVESQTPMDVDKQAIYRHPLFPLLAL 69
>U68727-1|AAC51243.1| 435|Homo sapiens homeobox-containing protein
protein.
Length = 435
Score = 29.9 bits (64), Expect = 4.9
Identities = 14/47 (29%), Positives = 23/47 (48%), Gaps = 2/47 (4%)
Frame = +2
Query: 131 QCNSEQDKNCGDPFKS--AKPPVECNTQDSINFNTLYLRNILPVEVL 265
+ +EQD NC +P + PPVE T ++ +Y + P+ L
Sbjct: 22 ELKTEQDPNCSEPDAEGVSPPPVESQTPMDVDKQAIYRHPLFPLLAL 68
>BC063829-1|AAH63829.1| 1664|Homo sapiens peroxisome
proliferator-activated receptor gamma,
coactivator-related 1 protein.
Length = 1664
Score = 29.9 bits (64), Expect = 4.9
Identities = 15/46 (32%), Positives = 29/46 (63%)
Frame = +3
Query: 96 RCSKQVIASSATNVTVNRIRTAGTRSRAPNPQ*NATPRIRLTSTRS 233
RCS +SS+++ + + ++ +RSR+P+P+ + R R +S RS
Sbjct: 1478 RCSSSSSSSSSSSSSSSSSSSSRSRSRSPSPRRRSDRRRRYSSYRS 1523
>BC007746-1|AAH07746.1| 436|Homo sapiens PBX/knotted 1 homeobox 1
protein.
Length = 436
Score = 29.9 bits (64), Expect = 4.9
Identities = 14/47 (29%), Positives = 23/47 (48%), Gaps = 2/47 (4%)
Frame = +2
Query: 131 QCNSEQDKNCGDPFKS--AKPPVECNTQDSINFNTLYLRNILPVEVL 265
+ +EQD NC +P + PPVE T ++ +Y + P+ L
Sbjct: 23 ELKTEQDPNCSEPDAEGVSPPPVESQTPMDVDKQAIYRHPLFPLLAL 69
>BC002561-1|AAH02561.2| 659|Homo sapiens PPRC1 protein protein.
Length = 659
Score = 29.9 bits (64), Expect = 4.9
Identities = 15/46 (32%), Positives = 29/46 (63%)
Frame = +3
Query: 96 RCSKQVIASSATNVTVNRIRTAGTRSRAPNPQ*NATPRIRLTSTRS 233
RCS +SS+++ + + ++ +RSR+P+P+ + R R +S RS
Sbjct: 483 RCSSSSSSSSSSSSSSSSSSSSRSRSRSPSPRRRSDRRRRYSSYRS 528
>BC000735-1|AAH00735.1| 336|Homo sapiens PKNOX1 protein protein.
Length = 336
Score = 29.9 bits (64), Expect = 4.9
Identities = 14/47 (29%), Positives = 23/47 (48%), Gaps = 2/47 (4%)
Frame = +2
Query: 131 QCNSEQDKNCGDPFKS--AKPPVECNTQDSINFNTLYLRNILPVEVL 265
+ +EQD NC +P + PPVE T ++ +Y + P+ L
Sbjct: 23 ELKTEQDPNCSEPDAEGVSPPPVESQTPMDVDKQAIYRHPLFPLLAL 69
>AY566249-1|AAT70235.1| 218|Homo sapiens pkonx1c protein.
Length = 218
Score = 29.9 bits (64), Expect = 4.9
Identities = 14/47 (29%), Positives = 23/47 (48%), Gaps = 2/47 (4%)
Frame = +2
Query: 131 QCNSEQDKNCGDPFKS--AKPPVECNTQDSINFNTLYLRNILPVEVL 265
+ +EQD NC +P + PPVE T ++ +Y + P+ L
Sbjct: 23 ELKTEQDPNCSEPDAEGVSPPPVESQTPMDVDKQAIYRHPLFPLLAL 69
>AY196965-1|AAO45825.1| 436|Homo sapiens homeobox-containing
protein PKNOX1 protein.
Length = 436
Score = 29.9 bits (64), Expect = 4.9
Identities = 14/47 (29%), Positives = 23/47 (48%), Gaps = 2/47 (4%)
Frame = +2
Query: 131 QCNSEQDKNCGDPFKS--AKPPVECNTQDSINFNTLYLRNILPVEVL 265
+ +EQD NC +P + PPVE T ++ +Y + P+ L
Sbjct: 23 ELKTEQDPNCSEPDAEGVSPPPVESQTPMDVDKQAIYRHPLFPLLAL 69
>AY142115-1|AAN34940.1| 405|Homo sapiens PKNOX1B protein.
Length = 405
Score = 29.9 bits (64), Expect = 4.9
Identities = 14/47 (29%), Positives = 23/47 (48%), Gaps = 2/47 (4%)
Frame = +2
Query: 131 QCNSEQDKNCGDPFKS--AKPPVECNTQDSINFNTLYLRNILPVEVL 265
+ +EQD NC +P + PPVE T ++ +Y + P+ L
Sbjct: 23 ELKTEQDPNCSEPDAEGVSPPPVESQTPMDVDKQAIYRHPLFPLLAL 69
>AP001748-1|BAA95533.1| 435|Homo sapiens homeobox-containing
protein protein.
Length = 435
Score = 29.9 bits (64), Expect = 4.9
Identities = 14/47 (29%), Positives = 23/47 (48%), Gaps = 2/47 (4%)
Frame = +2
Query: 131 QCNSEQDKNCGDPFKS--AKPPVECNTQDSINFNTLYLRNILPVEVL 265
+ +EQD NC +P + PPVE T ++ +Y + P+ L
Sbjct: 22 ELKTEQDPNCSEPDAEGVSPPPVESQTPMDVDKQAIYRHPLFPLLAL 68
>AL500527-6|CAH72219.1| 631|Homo sapiens peroxisome
proliferator-activated receptor gamma,pus laevis)
protein.
Length = 631
Score = 29.9 bits (64), Expect = 4.9
Identities = 15/46 (32%), Positives = 29/46 (63%)
Frame = +3
Query: 96 RCSKQVIASSATNVTVNRIRTAGTRSRAPNPQ*NATPRIRLTSTRS 233
RCS +SS+++ + + ++ +RSR+P+P+ + R R +S RS
Sbjct: 445 RCSSSSSSSSSSSSSSSSSSSSRSRSRSPSPRRRSDRRRRYSSYRS 490
>AL500527-5|CAH72218.1| 1664|Homo sapiens peroxisome
proliferator-activated receptor gamma,pus laevis)
protein.
Length = 1664
Score = 29.9 bits (64), Expect = 4.9
Identities = 15/46 (32%), Positives = 29/46 (63%)
Frame = +3
Query: 96 RCSKQVIASSATNVTVNRIRTAGTRSRAPNPQ*NATPRIRLTSTRS 233
RCS +SS+++ + + ++ +RSR+P+P+ + R R +S RS
Sbjct: 1478 RCSSSSSSSSSSSSSSSSSSSSRSRSRSPSPRRRSDRRRRYSSYRS 1523
>AK222892-1|BAD96612.1| 436|Homo sapiens PBX/knotted 1 homeobox 1
isoform 1 variant protein.
Length = 436
Score = 29.9 bits (64), Expect = 4.9
Identities = 14/47 (29%), Positives = 23/47 (48%), Gaps = 2/47 (4%)
Frame = +2
Query: 131 QCNSEQDKNCGDPFKS--AKPPVECNTQDSINFNTLYLRNILPVEVL 265
+ +EQD NC +P + PPVE T ++ +Y + P+ L
Sbjct: 23 ELKTEQDPNCSEPDAEGVSPPPVESQTPMDVDKQAIYRHPLFPLLAL 69
>AF325193-1|AAK11573.1| 1664|Homo sapiens PGC-1 related co-activator
protein.
Length = 1664
Score = 29.9 bits (64), Expect = 4.9
Identities = 15/46 (32%), Positives = 29/46 (63%)
Frame = +3
Query: 96 RCSKQVIASSATNVTVNRIRTAGTRSRAPNPQ*NATPRIRLTSTRS 233
RCS +SS+++ + + ++ +RSR+P+P+ + R R +S RS
Sbjct: 1478 RCSSSSSSSSSSSSSSSSSSSSRSRSRSPSPRRRSDRRRRYSSYRS 1523
>AB011167-1|BAA25521.2| 1666|Homo sapiens KIAA0595 protein protein.
Length = 1666
Score = 29.9 bits (64), Expect = 4.9
Identities = 15/46 (32%), Positives = 29/46 (63%)
Frame = +3
Query: 96 RCSKQVIASSATNVTVNRIRTAGTRSRAPNPQ*NATPRIRLTSTRS 233
RCS +SS+++ + + ++ +RSR+P+P+ + R R +S RS
Sbjct: 1480 RCSSSSSSSSSSSSSSSSSSSSRSRSRSPSPRRRSDRRRRYSSYRS 1525
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 72,387,913
Number of Sequences: 237096
Number of extensions: 1461270
Number of successful extensions: 3057
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 2975
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3057
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4366354454
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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