Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP13_F_J13
         (461 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U42587-1|AAB17433.1|  299|Drosophila melanogaster ribosomal prot...    58   6e-09
BT025837-1|ABF85737.1|  299|Drosophila melanogaster IP11377p pro...    58   6e-09
AY118961-1|AAM50821.1|  299|Drosophila melanogaster LD40873p pro...    58   6e-09
AL132792-4|CAB60023.1|  299|Drosophila melanogaster EG:BACR19J1....    58   6e-09
AF080131-1|AAD19341.1|  312|Drosophila melanogaster ribosomal pr...    58   6e-09
AE014298-104|AAF45546.1|  299|Drosophila melanogaster CG7434-PA ...    58   6e-09
AY089455-1|AAL90193.1|  312|Drosophila melanogaster AT26853p pro...    48   6e-06
AE013599-3561|AAF46972.1|  312|Drosophila melanogaster CG9871-PA...    48   6e-06

>U42587-1|AAB17433.1|  299|Drosophila melanogaster ribosomal protein
           Rpl22 protein.
          Length = 299

 Score = 58.0 bits (134), Expect = 6e-09
 Identities = 25/41 (60%), Positives = 31/41 (75%)
 Frame = +2

Query: 110 DCTHPAEDSILDVGNFEKYLKEHVKVEGKTNNLSNHVVVAR 232
           DCT+ AEDSI+DV +FEKY+K  +KV GK NNL N+V   R
Sbjct: 196 DCTNIAEDSIMDVADFEKYIKARLKVNGKVNNLGNNVTFER 236



 Score = 34.7 bits (76), Expect = 0.061
 Identities = 16/50 (32%), Positives = 25/50 (50%)
 Frame = +3

Query: 237 KTKVAITADIPFSXXXXXXXXXXXXXXXXXXDWLXVVASAHDAXELRYFQ 386
           K K+ +++D+ FS                  DW+ VVA+  D+ ELRYF+
Sbjct: 238 KLKLIVSSDVHFSKAYLKYLTKKYLKKNSLRDWIRVVANEKDSYELRYFR 287


>BT025837-1|ABF85737.1|  299|Drosophila melanogaster IP11377p
           protein.
          Length = 299

 Score = 58.0 bits (134), Expect = 6e-09
 Identities = 25/41 (60%), Positives = 31/41 (75%)
 Frame = +2

Query: 110 DCTHPAEDSILDVGNFEKYLKEHVKVEGKTNNLSNHVVVAR 232
           DCT+ AEDSI+DV +FEKY+K  +KV GK NNL N+V   R
Sbjct: 196 DCTNIAEDSIMDVADFEKYIKARLKVNGKVNNLGNNVTFER 236



 Score = 34.7 bits (76), Expect = 0.061
 Identities = 16/50 (32%), Positives = 25/50 (50%)
 Frame = +3

Query: 237 KTKVAITADIPFSXXXXXXXXXXXXXXXXXXDWLXVVASAHDAXELRYFQ 386
           K K+ +++D+ FS                  DW+ VVA+  D+ ELRYF+
Sbjct: 238 KLKLIVSSDVHFSKAYLKYLTKKYLKKNSLRDWIRVVANEKDSYELRYFR 287


>AY118961-1|AAM50821.1|  299|Drosophila melanogaster LD40873p
           protein.
          Length = 299

 Score = 58.0 bits (134), Expect = 6e-09
 Identities = 25/41 (60%), Positives = 31/41 (75%)
 Frame = +2

Query: 110 DCTHPAEDSILDVGNFEKYLKEHVKVEGKTNNLSNHVVVAR 232
           DCT+ AEDSI+DV +FEKY+K  +KV GK NNL N+V   R
Sbjct: 196 DCTNIAEDSIMDVADFEKYIKARLKVNGKVNNLGNNVTFER 236



 Score = 34.7 bits (76), Expect = 0.061
 Identities = 16/50 (32%), Positives = 25/50 (50%)
 Frame = +3

Query: 237 KTKVAITADIPFSXXXXXXXXXXXXXXXXXXDWLXVVASAHDAXELRYFQ 386
           K K+ +++D+ FS                  DW+ VVA+  D+ ELRYF+
Sbjct: 238 KLKLIVSSDVHFSKAYLKYLTKKYLKKNSLRDWIRVVANEKDSYELRYFR 287


>AL132792-4|CAB60023.1|  299|Drosophila melanogaster
           EG:BACR19J1.4,FBgn0015288;RpL22 protein.
          Length = 299

 Score = 58.0 bits (134), Expect = 6e-09
 Identities = 25/41 (60%), Positives = 31/41 (75%)
 Frame = +2

Query: 110 DCTHPAEDSILDVGNFEKYLKEHVKVEGKTNNLSNHVVVAR 232
           DCT+ AEDSI+DV +FEKY+K  +KV GK NNL N+V   R
Sbjct: 196 DCTNIAEDSIMDVADFEKYIKARLKVNGKVNNLGNNVTFER 236



 Score = 34.7 bits (76), Expect = 0.061
 Identities = 16/50 (32%), Positives = 25/50 (50%)
 Frame = +3

Query: 237 KTKVAITADIPFSXXXXXXXXXXXXXXXXXXDWLXVVASAHDAXELRYFQ 386
           K K+ +++D+ FS                  DW+ VVA+  D+ ELRYF+
Sbjct: 238 KLKLIVSSDVHFSKAYLKYLTKKYLKKNSLRDWIRVVANEKDSYELRYFR 287


>AF080131-1|AAD19341.1|  312|Drosophila melanogaster ribosomal
           protein L22 protein.
          Length = 312

 Score = 58.0 bits (134), Expect = 6e-09
 Identities = 25/41 (60%), Positives = 31/41 (75%)
 Frame = +2

Query: 110 DCTHPAEDSILDVGNFEKYLKEHVKVEGKTNNLSNHVVVAR 232
           DCT+ AEDSI+DV +FEKY+K  +KV GK NNL N+V   R
Sbjct: 209 DCTNIAEDSIMDVADFEKYIKARLKVNGKVNNLGNNVTFER 249



 Score = 35.1 bits (77), Expect = 0.046
 Identities = 16/50 (32%), Positives = 25/50 (50%)
 Frame = +3

Query: 237 KTKVAITADIPFSXXXXXXXXXXXXXXXXXXDWLXVVASAHDAXELRYFQ 386
           K K+ +++D+ FS                  DW+ VVA+  D+ ELRYF+
Sbjct: 251 KLKLTVSSDVHFSKAYLKYLTKKYLKKNSLRDWIRVVANEKDSYELRYFR 300


>AE014298-104|AAF45546.1|  299|Drosophila melanogaster CG7434-PA
           protein.
          Length = 299

 Score = 58.0 bits (134), Expect = 6e-09
 Identities = 25/41 (60%), Positives = 31/41 (75%)
 Frame = +2

Query: 110 DCTHPAEDSILDVGNFEKYLKEHVKVEGKTNNLSNHVVVAR 232
           DCT+ AEDSI+DV +FEKY+K  +KV GK NNL N+V   R
Sbjct: 196 DCTNIAEDSIMDVADFEKYIKARLKVNGKVNNLGNNVTFER 236



 Score = 34.7 bits (76), Expect = 0.061
 Identities = 16/50 (32%), Positives = 25/50 (50%)
 Frame = +3

Query: 237 KTKVAITADIPFSXXXXXXXXXXXXXXXXXXDWLXVVASAHDAXELRYFQ 386
           K K+ +++D+ FS                  DW+ VVA+  D+ ELRYF+
Sbjct: 238 KLKLIVSSDVHFSKAYLKYLTKKYLKKNSLRDWIRVVANEKDSYELRYFR 287


>AY089455-1|AAL90193.1|  312|Drosophila melanogaster AT26853p
           protein.
          Length = 312

 Score = 48.0 bits (109), Expect = 6e-06
 Identities = 20/41 (48%), Positives = 27/41 (65%)
 Frame = +2

Query: 110 DCTHPAEDSILDVGNFEKYLKEHVKVEGKTNNLSNHVVVAR 232
           DC   AED ILD+ +FE+YLK H+K++ K N L + V   R
Sbjct: 197 DCACVAEDMILDLADFEQYLKTHIKIKNKLNQLKDQVTFER 237


>AE013599-3561|AAF46972.1|  312|Drosophila melanogaster CG9871-PA
           protein.
          Length = 312

 Score = 48.0 bits (109), Expect = 6e-06
 Identities = 20/41 (48%), Positives = 27/41 (65%)
 Frame = +2

Query: 110 DCTHPAEDSILDVGNFEKYLKEHVKVEGKTNNLSNHVVVAR 232
           DC   AED ILD+ +FE+YLK H+K++ K N L + V   R
Sbjct: 197 DCACVAEDMILDLADFEQYLKTHIKIKNKLNQLKDQVTFER 237


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,883,432
Number of Sequences: 53049
Number of extensions: 242879
Number of successful extensions: 438
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 424
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 438
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1539014778
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)