Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP13_F_J07
         (478 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X59589-1|CAA42159.1|  395|Caenorhabditis elegans calreticulin pr...    86   1e-17
AF125963-7|AAD14746.1|  395|Caenorhabditis elegans Calreticulin ...    86   1e-17
Z22181-5|CAA80183.1|  619|Caenorhabditis elegans Hypothetical pr...    51   4e-07
Z81526-1|CAB04264.1|  816|Caenorhabditis elegans Hypothetical pr...    27   7.0  
Z29094-14|CAJ43434.1|  893|Caenorhabditis elegans Hypothetical p...    27   7.0  
Z29094-10|CAD45580.2|  965|Caenorhabditis elegans Hypothetical p...    27   7.0  
Z29094-9|CAA82347.3|  960|Caenorhabditis elegans Hypothetical pr...    27   7.0  
AY450852-1|AAR18092.1|  960|Caenorhabditis elegans Tousled-like ...    27   7.0  
Z81553-1|CAB04490.2|  327|Caenorhabditis elegans Hypothetical pr...    27   9.2  
U80451-1|AAB37835.1|  591|Caenorhabditis elegans Dnaj domain (pr...    27   9.2  

>X59589-1|CAA42159.1|  395|Caenorhabditis elegans calreticulin
           protein.
          Length = 395

 Score = 86.2 bits (204), Expect = 1e-17
 Identities = 39/76 (51%), Positives = 56/76 (73%), Gaps = 1/76 (1%)
 Frame = +2

Query: 101 INCDVFFEEKFPDDSWESNWVYSEHPGKEFGKFKLTAGKFFSDPEDDKGLKTSEDARFYA 280
           ++ +V+F+E+F D SWE  WV S+H   +FG FKL+AGKFF     D+G++TS+DA+FY+
Sbjct: 13  VSAEVYFKEEFNDASWEKRWVQSKHKD-DFGAFKLSAGKFFDVESRDQGIQTSQDAKFYS 71

Query: 281 LSRKF-KPFSNEGKPL 325
            + KF K FSN+GK L
Sbjct: 72  RAAKFDKDFSNKGKTL 87



 Score = 82.2 bits (194), Expect = 2e-16
 Identities = 33/48 (68%), Positives = 37/48 (77%)
 Frame = +3

Query: 327 VVQFTVKHEQDIDCGGGYLKVFDCKLXXKDMHGETPYXIMFGPDICGP 470
           V+Q+TVKHEQ IDCGGGY+KV        D HGETPY +MFGPDICGP
Sbjct: 88  VIQYTVKHEQGIDCGGGYVKVMRADADLGDFHGETPYNVMFGPDICGP 135


>AF125963-7|AAD14746.1|  395|Caenorhabditis elegans Calreticulin
           protein 1 protein.
          Length = 395

 Score = 86.2 bits (204), Expect = 1e-17
 Identities = 39/76 (51%), Positives = 56/76 (73%), Gaps = 1/76 (1%)
 Frame = +2

Query: 101 INCDVFFEEKFPDDSWESNWVYSEHPGKEFGKFKLTAGKFFSDPEDDKGLKTSEDARFYA 280
           ++ +V+F+E+F D SWE  WV S+H   +FG FKL+AGKFF     D+G++TS+DA+FY+
Sbjct: 13  VSAEVYFKEEFNDASWEKRWVQSKHKD-DFGAFKLSAGKFFDVESRDQGIQTSQDAKFYS 71

Query: 281 LSRKF-KPFSNEGKPL 325
            + KF K FSN+GK L
Sbjct: 72  RAAKFDKDFSNKGKTL 87



 Score = 82.2 bits (194), Expect = 2e-16
 Identities = 33/48 (68%), Positives = 37/48 (77%)
 Frame = +3

Query: 327 VVQFTVKHEQDIDCGGGYLKVFDCKLXXKDMHGETPYXIMFGPDICGP 470
           V+Q+TVKHEQ IDCGGGY+KV        D HGETPY +MFGPDICGP
Sbjct: 88  VIQYTVKHEQGIDCGGGYVKVMRADADLGDFHGETPYNVMFGPDICGP 135


>Z22181-5|CAA80183.1|  619|Caenorhabditis elegans Hypothetical
           protein ZK632.6 protein.
          Length = 619

 Score = 51.2 bits (117), Expect = 4e-07
 Identities = 23/52 (44%), Positives = 32/52 (61%), Gaps = 2/52 (3%)
 Frame = +3

Query: 318 NPWVVQFTVKHEQDIDCGGGYLKVFD--CKLXXKDMHGETPYXIMFGPDICG 467
           N +VVQ+ +K E+  +CGGGYLK+     +    +   +T Y IMFGPD CG
Sbjct: 136 NTFVVQYDIKFEEGQECGGGYLKLLSEGAEKDLANFQDKTAYTIMFGPDKCG 187


>Z81526-1|CAB04264.1|  816|Caenorhabditis elegans Hypothetical
           protein F33H2.2 protein.
          Length = 816

 Score = 27.1 bits (57), Expect = 7.0
 Identities = 14/35 (40%), Positives = 19/35 (54%)
 Frame = -2

Query: 147 HESSGNFSSKNTSQFIEDNASKLTTTSTTAFIFDS 43
           + S  +F S +TSQ   D +    T +  AFIFDS
Sbjct: 376 NNSVESFQSLSTSQTASDLSGSSGTVNRAAFIFDS 410


>Z29094-14|CAJ43434.1|  893|Caenorhabditis elegans Hypothetical
           protein C07A9.3c protein.
          Length = 893

 Score = 27.1 bits (57), Expect = 7.0
 Identities = 18/65 (27%), Positives = 25/65 (38%)
 Frame = -2

Query: 237 SSGSLKNFPAVNLNFPNSFPGCSLYTQLLSHESSGNFSSKNTSQFIEDNASKLTTTSTTA 58
           + GS K  PAV  N  NS+       Q+  HE   ++    T     +N    T T    
Sbjct: 254 NQGSPKRQPAVQQNGSNSYDSQQQQPQMNQHEMQNSYWGVATPSLGVNNRGTPTPTQQQH 313

Query: 57  FIFDS 43
           +  DS
Sbjct: 314 YSSDS 318


>Z29094-10|CAD45580.2|  965|Caenorhabditis elegans Hypothetical
           protein C07A9.3b protein.
          Length = 965

 Score = 27.1 bits (57), Expect = 7.0
 Identities = 18/65 (27%), Positives = 25/65 (38%)
 Frame = -2

Query: 237 SSGSLKNFPAVNLNFPNSFPGCSLYTQLLSHESSGNFSSKNTSQFIEDNASKLTTTSTTA 58
           + GS K  PAV  N  NS+       Q+  HE   ++    T     +N    T T    
Sbjct: 321 NQGSPKRQPAVQQNGSNSYDSQQQQPQMNQHEMQNSYWGVATPSLGVNNRGTPTPTQQQH 380

Query: 57  FIFDS 43
           +  DS
Sbjct: 381 YSSDS 385


>Z29094-9|CAA82347.3|  960|Caenorhabditis elegans Hypothetical
           protein C07A9.3a protein.
          Length = 960

 Score = 27.1 bits (57), Expect = 7.0
 Identities = 18/65 (27%), Positives = 25/65 (38%)
 Frame = -2

Query: 237 SSGSLKNFPAVNLNFPNSFPGCSLYTQLLSHESSGNFSSKNTSQFIEDNASKLTTTSTTA 58
           + GS K  PAV  N  NS+       Q+  HE   ++    T     +N    T T    
Sbjct: 321 NQGSPKRQPAVQQNGSNSYDSQQQQPQMNQHEMQNSYWGVATPSLGVNNRGTPTPTQQQH 380

Query: 57  FIFDS 43
           +  DS
Sbjct: 381 YSSDS 385


>AY450852-1|AAR18092.1|  960|Caenorhabditis elegans Tousled-like
           kinase protein.
          Length = 960

 Score = 27.1 bits (57), Expect = 7.0
 Identities = 18/65 (27%), Positives = 25/65 (38%)
 Frame = -2

Query: 237 SSGSLKNFPAVNLNFPNSFPGCSLYTQLLSHESSGNFSSKNTSQFIEDNASKLTTTSTTA 58
           + GS K  PAV  N  NS+       Q+  HE   ++    T     +N    T T    
Sbjct: 321 NQGSPKRQPAVQQNGSNSYDSQQQQPQMNQHEMQNSYWGVATPSLGVNNRGTPTPTQQQH 380

Query: 57  FIFDS 43
           +  DS
Sbjct: 381 YSSDS 385


>Z81553-1|CAB04490.2|  327|Caenorhabditis elegans Hypothetical
           protein F56H6.1 protein.
          Length = 327

 Score = 26.6 bits (56), Expect = 9.2
 Identities = 16/44 (36%), Positives = 22/44 (50%)
 Frame = +2

Query: 119 FEEKFPDDSWESNWVYSEHPGKEFGKFKLTAGKFFSDPEDDKGL 250
           F EK   D +   + ++E  G   G+    AG F +D  DDKGL
Sbjct: 218 FVEKLYHDEYTCPYDWAEDRG--MGRCMARAGIFPTDTRDDKGL 259


>U80451-1|AAB37835.1|  591|Caenorhabditis elegans Dnaj domain
           (prokaryotic heat shockprotein) protein 9 protein.
          Length = 591

 Score = 26.6 bits (56), Expect = 9.2
 Identities = 13/46 (28%), Positives = 23/46 (50%)
 Frame = -2

Query: 294 NLRERA*NLASSEVFKPLSSSGSLKNFPAVNLNFPNSFPGCSLYTQ 157
           ++ E +  L +  V   +S    L  +  ++ +F  SFP C LYT+
Sbjct: 352 SITEMSVQLTTYGVNPAISMDRRLSRYSRISCSFHFSFPSCLLYTK 397


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,683,913
Number of Sequences: 27780
Number of extensions: 243043
Number of successful extensions: 670
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 622
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 667
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 871571276
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)