Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP13_F_J07
         (478 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    22   2.9  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    22   2.9  
EF493864-1|ABP65286.1|  247|Apis mellifera triosephoshpate isome...    21   6.8  
DQ435333-1|ABD92648.1|  135|Apis mellifera OBP16 protein.              21   6.8  
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    21   6.8  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    21   9.0  

>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 22.2 bits (45), Expect = 2.9
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = +3

Query: 252 KPLKMRGSMLSPVSSNRSVMRV 317
           +P   RG+++SP  + R  M+V
Sbjct: 893 EPYNQRGTVVSPPPTKRRTMKV 914


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 22.2 bits (45), Expect = 2.9
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = +3

Query: 252 KPLKMRGSMLSPVSSNRSVMRV 317
           +P   RG+++SP  + R  M+V
Sbjct: 931 EPYNQRGTVVSPPPTKRRTMKV 952


>EF493864-1|ABP65286.1|  247|Apis mellifera triosephoshpate
           isomerase protein.
          Length = 247

 Score = 21.0 bits (42), Expect = 6.8
 Identities = 10/30 (33%), Positives = 15/30 (50%)
 Frame = -2

Query: 147 HESSGNFSSKNTSQFIEDNASKLTTTSTTA 58
           HE   N+ SKN +Q + +    +   S TA
Sbjct: 184 HEKLRNWFSKNVNQTVAETVRIIYGGSVTA 213


>DQ435333-1|ABD92648.1|  135|Apis mellifera OBP16 protein.
          Length = 135

 Score = 21.0 bits (42), Expect = 6.8
 Identities = 6/16 (37%), Positives = 11/16 (68%)
 Frame = -2

Query: 144 ESSGNFSSKNTSQFIE 97
           + +GNF+ KNT   ++
Sbjct: 74  DENGNFNEKNTRDIVQ 89


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 21.0 bits (42), Expect = 6.8
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = +3

Query: 312 RVNPWVVQFTVKHEQ 356
           R NPW V+F   H Q
Sbjct: 421 RRNPWFVEFWEHHFQ 435


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 20.6 bits (41), Expect = 9.0
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = -1

Query: 373 PPQSMSCSCL 344
           P Q+ SCSCL
Sbjct: 320 PSQASSCSCL 329


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 141,576
Number of Sequences: 438
Number of extensions: 2960
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 12928545
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)