Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP13_F_I18
(650 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 33 0.027
SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyc... 33 0.036
SPAC2F7.11 |nrd1|msa2|RNA-binding protein Nrd1|Schizosaccharomyc... 31 0.19
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 30 0.25
SPBC317.01 |mbx2|pvg4|MADS-box transcription factor Pvg4|Schizos... 29 0.44
SPAC1805.11c |rps2602|rps26-2|40S ribosomal protein S26|Schizosa... 29 0.44
SPAC806.03c |rps2601|rps26-1, rps26|40S ribosomal protein S26|Sc... 29 0.58
SPBC3B8.02 |php5||CCAAT-binding factor complex subunit Php5|Schi... 28 1.0
SPBC21D10.06c |map4||cell agglutination protein Map4|Schizosacch... 28 1.3
SPAC25B8.19c ||SPAC683.01c|transcription factor, zf-fungal binuc... 27 1.8
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 27 1.8
SPAC1783.04c |hst4||Sir2 family histone deacetylase Hst4|Schizos... 27 1.8
SPAC30D11.14c |||RNA-binding protein |Schizosaccharomyces pombe|... 27 1.8
SPBC146.13c |myo1||myosin type I|Schizosaccharomyces pombe|chr 2... 27 3.1
SPAC20G4.07c |sts1|erg4|C-24|Schizosaccharomyces pombe|chr 1|||M... 26 4.1
SPCC162.07 |ent1||epsin|Schizosaccharomyces pombe|chr 3|||Manual 26 4.1
SPBP23A10.06 |||manganese ion transporter |Schizosaccharomyces p... 26 5.4
SPAC30D11.02c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 26 5.4
SPAC17C9.12 |||MSP domain|Schizosaccharomyces pombe|chr 1|||Manual 26 5.4
SPAC824.06 |tim14||TIM23 translocase complex subunit Tim14|Schiz... 25 7.2
SPAC821.09 |eng1||endo-1,3-beta-glucanase Eng1|Schizosaccharomyc... 25 7.2
SPBC1778.08c |arc3|arc21|ARP2/3 actin-organizing complex subunit... 25 9.5
SPBC119.08 |pmk1|spm1|MAP kinase Pmk1 |Schizosaccharomyces pombe... 25 9.5
SPAC19A8.03 |||phosphatidylinositol-3-phosphatase |Schizosacchar... 25 9.5
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 33.5 bits (73), Expect = 0.027
Identities = 21/67 (31%), Positives = 26/67 (38%), Gaps = 6/67 (8%)
Frame = +2
Query: 404 VNAPYPTQGVPYPATQGAPYPTTQGA---PYPTTQGAPYPTTQG---LPYPVAQSVPYPV 565
V AP VP P+ P P GA P P+ P P G +P P + P P
Sbjct: 1114 VPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPA 1173
Query: 566 AQSALYP 586
S + P
Sbjct: 1174 PSSGIPP 1180
Score = 27.9 bits (59), Expect = 1.3
Identities = 21/64 (32%), Positives = 26/64 (40%), Gaps = 5/64 (7%)
Frame = +2
Query: 404 VNAPYPTQGVPYPATQGAPYPTTQGA--PYPTTQGA---PYPTTQGLPYPVAQSVPYPVA 568
V AP VP P+ P P A P P GA P P+ P PV P PV
Sbjct: 1085 VPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAP-PVP 1143
Query: 569 QSAL 580
+ ++
Sbjct: 1144 KPSV 1147
Score = 25.0 bits (52), Expect = 9.5
Identities = 18/67 (26%), Positives = 28/67 (41%), Gaps = 2/67 (2%)
Frame = +2
Query: 386 PPTNVVVNAPYPTQGVPYP-ATQGAPYPTTQGAPYPTTQGAPYPTTQGL-PYPVAQSVPY 559
P + P PT P P ++ GAP P P+++ P G P P +P
Sbjct: 1035 PVPSTAPPVPIPTSTPPVPKSSSGAP-SAPPPVPAPSSEIPSIPAPSGAPPVPAPSGIP- 1092
Query: 560 PVAQSAL 580
PV + ++
Sbjct: 1093 PVPKPSV 1099
>SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 587
Score = 33.1 bits (72), Expect = 0.036
Identities = 25/82 (30%), Positives = 31/82 (37%), Gaps = 7/82 (8%)
Frame = +2
Query: 419 PTQGVPYPATQGAPYPTT----QGAPYPTTQGAPYPTTQGLPYP--VAQSVPYPVAQSAL 580
P+Q P+ AP P T G P P GAP + P V + P A
Sbjct: 479 PSQNAPFIPGTSAPLPPTTFAPPGVPLPPIPGAPGMPNLNMSQPPMVPPGMALPPGMPAP 538
Query: 581 YPGCSEC-AIPNNAGCTIPDNA 643
+PG A+P G T P A
Sbjct: 539 FPGYPAVPAMPGIPGATAPPGA 560
>SPAC2F7.11 |nrd1|msa2|RNA-binding protein Nrd1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 529
Score = 30.7 bits (66), Expect = 0.19
Identities = 17/68 (25%), Positives = 29/68 (42%), Gaps = 2/68 (2%)
Frame = +2
Query: 389 PTNVVVNAPYPTQGVPYPATQGAPYPTTQGAPYPTTQGAPYPTTQGLPYPVAQSVP--YP 562
PT +++ +P+ Y + G P+ TTQ A P Y ++ VA P +P
Sbjct: 46 PTGLLMGSPFVQSPTSYTSMHGLPFSTTQMAAAPAHPTTGYNVSRVTSPNVANFAPGYFP 105
Query: 563 VAQSALYP 586
+ + P
Sbjct: 106 LPNNTTQP 113
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 30.3 bits (65), Expect = 0.25
Identities = 23/65 (35%), Positives = 24/65 (36%)
Frame = +2
Query: 386 PPTNVVVNAPYPTQGVPYPATQGAPYPTTQGAPYPTTQGAPYPTTQGLPYPVAQSVPYPV 565
PP AP P P P P AP P G P LP A SVP P
Sbjct: 1690 PPVRPQSAAP-PQMSAPTPPPPPMSVPPPPSAP-PMPAGPPSAPPPPLPASSAPSVPNPG 1747
Query: 566 AQSAL 580
+SAL
Sbjct: 1748 DRSAL 1752
>SPBC317.01 |mbx2|pvg4|MADS-box transcription factor
Pvg4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 372
Score = 29.5 bits (63), Expect = 0.44
Identities = 21/74 (28%), Positives = 28/74 (37%), Gaps = 3/74 (4%)
Frame = +2
Query: 386 PPTNVVVNAPYPT-QGVPYPATQGAPYPTTQGAPYPTTQGAPYPTTQGLPYPVAQS--VP 556
P T + P+P YP P + GA P +PYP+ G P Q+ P
Sbjct: 171 PHTRPPHHPPHPHFHNNNYPPPYCFQSPVSPGATVPLQHHSPYPSDNGFPGHRRQTHFAP 230
Query: 557 YPVAQSALYPGCSE 598
Y Q A P +
Sbjct: 231 YYYPQRATSPSLKQ 244
>SPAC1805.11c |rps2602|rps26-2|40S ribosomal protein
S26|Schizosaccharomyces pombe|chr 1|||Manual
Length = 119
Score = 29.5 bits (63), Expect = 0.44
Identities = 14/27 (51%), Positives = 20/27 (74%)
Frame = +3
Query: 435 HTRQLRVRHTRQLRALHTPPLRVRHTR 515
H+R +RVR +R+ R + TPP RVR+ R
Sbjct: 80 HSRVVRVR-SREGRRIRTPPPRVRYNR 105
>SPAC806.03c |rps2601|rps26-1, rps26|40S ribosomal protein
S26|Schizosaccharomyces pombe|chr 1|||Manual
Length = 120
Score = 29.1 bits (62), Expect = 0.58
Identities = 14/27 (51%), Positives = 19/27 (70%)
Frame = +3
Query: 435 HTRQLRVRHTRQLRALHTPPLRVRHTR 515
H R +RVR +R+ R + TPP RVR+ R
Sbjct: 80 HARVVRVR-SREGRRIRTPPPRVRYNR 105
>SPBC3B8.02 |php5||CCAAT-binding factor complex subunit
Php5|Schizosaccharomyces pombe|chr 2|||Manual
Length = 415
Score = 28.3 bits (60), Expect = 1.0
Identities = 17/43 (39%), Positives = 21/43 (48%)
Frame = +2
Query: 458 PYPTTQGAPYPTTQGAPYPTTQGLPYPVAQSVPYPVAQSALYP 586
P+PT G P QG P PT LP+ QS P Q + +P
Sbjct: 218 PFPTQAGLP---NQGFPMPTGSQLPFSNQQS-SQPSMQYSSHP 256
>SPBC21D10.06c |map4||cell agglutination protein
Map4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 948
Score = 27.9 bits (59), Expect = 1.3
Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
Frame = +2
Query: 467 TTQGAPYPTTQGAPYPTTQGLPYPVAQSVPYPVAQSALYPGC-SECAIPNN 616
T+ + TT P TT G V VP P A S+ +P C ++C N+
Sbjct: 768 TSGSVGFTTTIATPVGTTAGT---VLIDVPTPTASSSPFPSCNTQCTNENS 815
>SPAC25B8.19c ||SPAC683.01c|transcription factor, zf-fungal
binuclear cluster type |Schizosaccharomyces pombe|chr
1|||Manual
Length = 522
Score = 27.5 bits (58), Expect = 1.8
Identities = 16/41 (39%), Positives = 18/41 (43%)
Frame = +2
Query: 464 PTTQGAPYPTTQGAPYPTTQGLPYPVAQSVPYPVAQSALYP 586
PTT G Y PYP Q + + VP VAQ A P
Sbjct: 23 PTTSGIVYNMFPACPYPHVQNPAFHGSVDVP-QVAQKAFDP 62
Score = 26.2 bits (55), Expect = 4.1
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = +2
Query: 512 PTTQGLPYPVAQSVPYPVAQSALYPG 589
PTT G+ Y + + PYP Q+ + G
Sbjct: 23 PTTSGIVYNMFPACPYPHVQNPAFHG 48
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 27.5 bits (58), Expect = 1.8
Identities = 18/68 (26%), Positives = 25/68 (36%), Gaps = 1/68 (1%)
Frame = +2
Query: 386 PPTNVV-VNAPYPTQGVPYPATQGAPYPTTQGAPYPTTQGAPYPTTQGLPYPVAQSVPYP 562
PPT+ + P P T P PTT + +T P + L P+ +VP
Sbjct: 139 PPTSTSSTSIPIPPTSTSSTDTNSNPLPTTSTSCTTSTSIPPTGGSSSLSTPITPTVPPT 198
Query: 563 VAQSALYP 586
S P
Sbjct: 199 STSSTSIP 206
>SPAC1783.04c |hst4||Sir2 family histone deacetylase
Hst4|Schizosaccharomyces pombe|chr 1|||Manual
Length = 415
Score = 27.5 bits (58), Expect = 1.8
Identities = 16/39 (41%), Positives = 26/39 (66%), Gaps = 1/39 (2%)
Frame = +3
Query: 504 RHTRQLRVYHTQLLRVCHTRLLRVRY-IPVAQNAPYPTT 617
+ ++ LR+Y TQ + TRL ++ IP+ Q+AP+PTT
Sbjct: 143 QESKLLRLY-TQNIDFLETRLEGLQTCIPLPQSAPWPTT 180
>SPAC30D11.14c |||RNA-binding protein |Schizosaccharomyces pombe|chr
1|||Manual
Length = 534
Score = 27.5 bits (58), Expect = 1.8
Identities = 15/48 (31%), Positives = 18/48 (37%)
Frame = +2
Query: 389 PTNVVVNAPYPTQGVPYPATQGAPYPTTQGAPYPTTQGAPYPTTQGLP 532
PTN AP T +P P+ P P T PTT +P
Sbjct: 420 PTNASP-APLVTPSLPVPSIPAVPGMEAMAMPPGVTSSIAVPTTSSMP 466
Score = 25.0 bits (52), Expect = 9.5
Identities = 13/47 (27%), Positives = 16/47 (34%), Gaps = 1/47 (2%)
Frame = +2
Query: 419 PTQGVPYP-ATQGAPYPTTQGAPYPTTQGAPYPTTQGLPYPVAQSVP 556
PT P P T P P+ P P T + P S+P
Sbjct: 420 PTNASPAPLVTPSLPVPSIPAVPGMEAMAMPPGVTSSIAVPTTSSMP 466
>SPBC146.13c |myo1||myosin type I|Schizosaccharomyces pombe|chr
2|||Manual
Length = 1217
Score = 26.6 bits (56), Expect = 3.1
Identities = 17/58 (29%), Positives = 20/58 (34%), Gaps = 2/58 (3%)
Frame = +2
Query: 389 PTNVVVNAPYPTQGVPYPATQGAPYPTTQ--GAPYPTTQGAPYPTTQGLPYPVAQSVP 556
P VV N P T+ V PA + P P T P P Q P + P
Sbjct: 986 PRPVVQNKPAATKPVSMPAAKSKPAPMANPVSTAQQTQNRPPAPAMQARPNTTQAAAP 1043
>SPAC20G4.07c |sts1|erg4|C-24|Schizosaccharomyces pombe|chr
1|||Manual
Length = 453
Score = 26.2 bits (55), Expect = 4.1
Identities = 8/18 (44%), Positives = 13/18 (72%)
Frame = +1
Query: 4 DLNDLCR*CRYLYLPTVF 57
D ++ CR C YL++P +F
Sbjct: 436 DFDEYCRICPYLFIPYIF 453
>SPCC162.07 |ent1||epsin|Schizosaccharomyces pombe|chr 3|||Manual
Length = 706
Score = 26.2 bits (55), Expect = 4.1
Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 2/37 (5%)
Frame = -2
Query: 424 SRVRRIDDDVCGR--YQHACLSPAPSTAAEYYTKDYD 320
+R R DDD R Y+ + LS APS A+ Y D D
Sbjct: 159 TRSSRFDDDDDDRAPYEESRLSRAPSRASRYDDDDRD 195
>SPBP23A10.06 |||manganese ion transporter |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 335
Score = 25.8 bits (54), Expect = 5.4
Identities = 10/27 (37%), Positives = 13/27 (48%)
Frame = -1
Query: 494 WWGMERPELSGMAHPELPGMAHPESGK 414
WW ER L + HP L + +S K
Sbjct: 218 WWSYERIRLFLLGHPSLQAFSSSQSTK 244
>SPAC30D11.02c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 85
Score = 25.8 bits (54), Expect = 5.4
Identities = 9/37 (24%), Positives = 21/37 (56%)
Frame = -3
Query: 258 ISSLINHCPSKILILQVFLSFSQNHFSVMMKLMRPVR 148
+ L+ HC + + V L +++N F + + +RP++
Sbjct: 1 MGKLVKHCHTSLHSELVILFYAKNRFCISIDHLRPLK 37
>SPAC17C9.12 |||MSP domain|Schizosaccharomyces pombe|chr 1|||Manual
Length = 319
Score = 25.8 bits (54), Expect = 5.4
Identities = 13/45 (28%), Positives = 16/45 (35%)
Frame = +2
Query: 422 TQGVPYPATQGAPYPTTQGAPYPTTQGAPYPTTQGLPYPVAQSVP 556
TQ P T + AP + + PYP QSVP
Sbjct: 189 TQHTQLPKTSAVSHQKPHEAPSTAVKAPTATVAENEPYPKPQSVP 233
>SPAC824.06 |tim14||TIM23 translocase complex subunit
Tim14|Schizosaccharomyces pombe|chr 1|||Manual
Length = 140
Score = 25.4 bits (53), Expect = 7.2
Identities = 16/49 (32%), Positives = 25/49 (51%)
Frame = +1
Query: 343 LLLSTAPERGTRVDTAHKRRRQCALPDSGCAIPGNSGCAIPDNSGRSIP 489
L+L+ P+RG A K +L D+ +I S A+P + RS+P
Sbjct: 75 LMLANHPDRGGSPYVASKVNEAKSLLDADRSIRKFSSWALPVSKQRSMP 123
>SPAC821.09 |eng1||endo-1,3-beta-glucanase Eng1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1016
Score = 25.4 bits (53), Expect = 7.2
Identities = 18/55 (32%), Positives = 22/55 (40%), Gaps = 5/55 (9%)
Frame = +2
Query: 428 GVPYPATQGAPYPTTQ-----GAPYPTTQGAPYPTTQGLPYPVAQSVPYPVAQSA 577
GV Y + GA Y +Q G+ P T TT P P + P P SA
Sbjct: 904 GVDYLSCNGACYNPSQYVCSDGSLSPNTVTTTKATTTFTPTPTTTTTPTPTTTSA 958
>SPBC1778.08c |arc3|arc21|ARP2/3 actin-organizing complex subunit
Arc21|Schizosaccharomyces pombe|chr 2|||Manual
Length = 174
Score = 25.0 bits (52), Expect = 9.5
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = +3
Query: 471 LRALHTPPLRVRHTRQLRVYHTQLLRVCHTRLL 569
L AL+ PPL + +R Y TQ + RLL
Sbjct: 114 LNALYAPPLSPQDAEIMRTYLTQFRQELAYRLL 146
>SPBC119.08 |pmk1|spm1|MAP kinase Pmk1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 422
Score = 25.0 bits (52), Expect = 9.5
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = +2
Query: 389 PTNVVVNAPYPTQGVP 436
PTN VN P P Q VP
Sbjct: 364 PTNPTVNIPQPAQTVP 379
>SPAC19A8.03 |||phosphatidylinositol-3-phosphatase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 559
Score = 25.0 bits (52), Expect = 9.5
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = +2
Query: 533 YPVAQSVPYPVAQSALYPGC 592
YP A +VP ++ S +Y GC
Sbjct: 163 YPQALAVPASISDSVIYYGC 182
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,544,931
Number of Sequences: 5004
Number of extensions: 53237
Number of successful extensions: 197
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 140
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 183
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 293780908
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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