Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP13_F_I08
         (457 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC024843-9|AAF60836.1|  263|Caenorhabditis elegans Hypothetical ...    31   0.30 
AF016663-3|AAC70878.1| 1170|Caenorhabditis elegans Hypothetical ...    29   2.1  
U00040-4|AAM22034.1| 1139|Caenorhabditis elegans Hypothetical pr...    28   2.8  
AF016427-10|AAB65348.1|  301|Caenorhabditis elegans Hypothetical...    28   2.8  
U00036-9|AAK29852.1|  377|Caenorhabditis elegans Hypothetical pr...    28   3.7  
AC024785-5|AAF60596.1|  577|Caenorhabditis elegans C-type lectin...    27   4.9  
Z68134-3|CAA92225.1|   97|Caenorhabditis elegans Hypothetical pr...    27   6.5  
Z29560-5|CAA82664.1| 1385|Caenorhabditis elegans Hypothetical pr...    27   6.5  
AF047655-5|AAC04399.1|  820|Caenorhabditis elegans Hypothetical ...    27   6.5  
AL034488-3|CAA22456.1|  504|Caenorhabditis elegans Hypothetical ...    27   8.6  
AF003139-10|AAB54160.3|  294|Caenorhabditis elegans Hypothetical...    27   8.6  
AC006731-1|AAF60483.1| 4900|Caenorhabditis elegans Temporarily a...    27   8.6  

>AC024843-9|AAF60836.1|  263|Caenorhabditis elegans Hypothetical
           protein Y61A9LA.9 protein.
          Length = 263

 Score = 31.5 bits (68), Expect = 0.30
 Identities = 17/53 (32%), Positives = 25/53 (47%)
 Frame = -2

Query: 402 ASPSRPAEIMPLSQRTQKPRYSPPLRIPGLSISTLSGLVLFFLMTLLAFPQPP 244
           A+PS P  I     +T+KP  S P +I   S +  +  +  F  TL + P  P
Sbjct: 186 ANPSLPVHIQTFRVKTRKPVLSRPTKIRFSSEADRNSFIFSFSKTLRSLPDRP 238


>AF016663-3|AAC70878.1| 1170|Caenorhabditis elegans Hypothetical
           protein F21E9.1 protein.
          Length = 1170

 Score = 28.7 bits (61), Expect = 2.1
 Identities = 18/63 (28%), Positives = 35/63 (55%)
 Frame = -1

Query: 406 NSFTLASSGDNAAIPTNPKTTIFPSVKNSGAFNFNLIGLGSIFPDDALSVSPASNHHLIH 227
           +S  L+S   N +  + P+T+    +  S +F+F+L       P  +L +SP  ++H+IH
Sbjct: 261 SSLLLSSINSNLSHNSIPQTSP-KRISQSSSFSFSL-------PPSSLPLSPKIDNHVIH 312

Query: 226 RIR 218
           +I+
Sbjct: 313 KIK 315


>U00040-4|AAM22034.1| 1139|Caenorhabditis elegans Hypothetical protein
            C18H2.5 protein.
          Length = 1139

 Score = 28.3 bits (60), Expect = 2.8
 Identities = 14/27 (51%), Positives = 17/27 (62%)
 Frame = +1

Query: 97   DVATDDNLQYQFFPXFKWISSVQSQSS 177
            D +TDD L  QF   FK I+S + QSS
Sbjct: 921  DKSTDDKLTNQFMEVFKSIASNEPQSS 947


>AF016427-10|AAB65348.1|  301|Caenorhabditis elegans Hypothetical
           protein F32D1.7 protein.
          Length = 301

 Score = 28.3 bits (60), Expect = 2.8
 Identities = 13/36 (36%), Positives = 19/36 (52%)
 Frame = -2

Query: 441 GKGSGSDQDMNGIASPSRPAEIMPLSQRTQKPRYSP 334
           G GSGS  D +G + P+R +  +P +     PR  P
Sbjct: 159 GSGSGSGNDSSGSSGPTRMSGQVPSTSGPPPPRPPP 194


>U00036-9|AAK29852.1|  377|Caenorhabditis elegans Hypothetical
           protein R151.1 protein.
          Length = 377

 Score = 27.9 bits (59), Expect = 3.7
 Identities = 16/55 (29%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
 Frame = +2

Query: 293 PDKVEIESPGILNGGEYRGFWVRWDSGIISAGREGEAIPF--ISWSDPEPFPXYY 451
           P  VEIE+  I++GG+     + W +      REG  I +  ++ +  + FP Y+
Sbjct: 3   PTNVEIETKVIMDGGKILETTINWKADEKDTRREGFYIRYTAVNSTCQKHFPGYF 57


>AC024785-5|AAF60596.1|  577|Caenorhabditis elegans C-type lectin
           protein 73 protein.
          Length = 577

 Score = 27.5 bits (58), Expect = 4.9
 Identities = 11/25 (44%), Positives = 17/25 (68%)
 Frame = +2

Query: 218 SDPMYEVMIGGWGNAKSVIRKNRTK 292
           S+P YEV++GG   A  V+ +N+ K
Sbjct: 334 SNPHYEVVLGGKKTANFVVEENKIK 358


>Z68134-3|CAA92225.1|   97|Caenorhabditis elegans Hypothetical
           protein T27A8.4 protein.
          Length = 97

 Score = 27.1 bits (57), Expect = 6.5
 Identities = 13/44 (29%), Positives = 20/44 (45%)
 Frame = -2

Query: 432 SGSDQDMNGIASPSRPAEIMPLSQRTQKPRYSPPLRIPGLSIST 301
           SG +QD+    + S   EI  +  ++    YSPP   P   + T
Sbjct: 32  SGENQDLGREENGSEEDEIQQVETQSDDGNYSPPSGTPETEVET 75


>Z29560-5|CAA82664.1| 1385|Caenorhabditis elegans Hypothetical
           protein K03H1.5 protein.
          Length = 1385

 Score = 27.1 bits (57), Expect = 6.5
 Identities = 11/37 (29%), Positives = 18/37 (48%)
 Frame = +2

Query: 344 RGFWVRWDSGIISAGREGEAIPFISWSDPEPFPXYYV 454
           R  W ++  G +      +A   + WS P PFP Y++
Sbjct: 638 RDAWQKFHFGFVQVAL-ADAEDGVMWSKPTPFPWYHL 673


>AF047655-5|AAC04399.1|  820|Caenorhabditis elegans Hypothetical
           protein C17B7.5 protein.
          Length = 820

 Score = 27.1 bits (57), Expect = 6.5
 Identities = 15/65 (23%), Positives = 32/65 (49%)
 Frame = +1

Query: 88  NVMDVATDDNLQYQFFPXFKWISSVQSQSSE*CPRRAHDRPARIGSYV*GDDWRLGKR*E 267
           N MD+ T+ +LQ++  P  K+   ++  ++         +   +GS+     WRL +R E
Sbjct: 388 NCMDIPTNGSLQFEKPPFDKFFIGIKMLNNMTTNHTNLPKIDNVGSFNVNGHWRLIRRRE 447

Query: 268 RHQEK 282
           + + +
Sbjct: 448 KFERQ 452


>AL034488-3|CAA22456.1|  504|Caenorhabditis elegans Hypothetical
           protein Y54G11A.3 protein.
          Length = 504

 Score = 26.6 bits (56), Expect = 8.6
 Identities = 10/19 (52%), Positives = 14/19 (73%)
 Frame = +2

Query: 383 AGREGEAIPFISWSDPEPF 439
           AGR+GEA+ F+ W+D   F
Sbjct: 432 AGRKGEAMSFLWWNDRSNF 450


>AF003139-10|AAB54160.3|  294|Caenorhabditis elegans Hypothetical
           protein F53G12.4 protein.
          Length = 294

 Score = 26.6 bits (56), Expect = 8.6
 Identities = 12/38 (31%), Positives = 22/38 (57%)
 Frame = +2

Query: 275 RKNRTKPDKVEIESPGILNGGEYRGFWVRWDSGIISAG 388
           +K   KP + E+  P +L+ GE       +D+G++S+G
Sbjct: 251 KKEEAKPKEQELVEPLVLSEGESIDELEDFDTGLLSSG 288


>AC006731-1|AAF60483.1| 4900|Caenorhabditis elegans Temporarily
            assigned gene nameprotein 80 protein.
          Length = 4900

 Score = 26.6 bits (56), Expect = 8.6
 Identities = 13/26 (50%), Positives = 13/26 (50%)
 Frame = -1

Query: 409  WNSFTLASSGDNAAIPTNPKTTIFPS 332
            W  F   SS  NA  PTN  T  FPS
Sbjct: 2996 WAKFEEISSSSNAEWPTNISTYKFPS 3021


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,556,303
Number of Sequences: 27780
Number of extensions: 189469
Number of successful extensions: 560
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 545
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 560
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 809909048
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)