Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP13_F_I07
         (393 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          23   1.3  
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      23   1.3  
AY736135-1|AAU84701.1|  253|Apis mellifera take-out-like carrier...    21   5.1  
AY375535-1|AAQ82648.1|  147|Apis mellifera doublesex protein.          21   5.1  
AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    21   5.1  
DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    21   6.7  
AY540846-1|AAS48080.1|  541|Apis mellifera neuronal nicotinic ac...    20   8.8  

>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 23.0 bits (47), Expect = 1.3
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -2

Query: 128 LFHLFYICDTYINNLIFIAN 69
           L+  F  CDT INN + + N
Sbjct: 461 LYTYFDKCDTLINNAVAVEN 480


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 23.0 bits (47), Expect = 1.3
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -2

Query: 128 LFHLFYICDTYINNLIFIAN 69
           L+  F  CDT INN + + N
Sbjct: 461 LYTYFDKCDTLINNAVAVEN 480


>AY736135-1|AAU84701.1|  253|Apis mellifera take-out-like carrier
           protein JHBP-1 protein.
          Length = 253

 Score = 21.0 bits (42), Expect = 5.1
 Identities = 10/34 (29%), Positives = 17/34 (50%)
 Frame = +3

Query: 138 NGNLHHETRRHSVRKRFRDCKLRFIKLLTLRRDL 239
           NG  +   ++H+V+      KLRF  L    ++L
Sbjct: 169 NGETYLRIKKHAVKFNPAKVKLRFENLFDGNKEL 202


>AY375535-1|AAQ82648.1|  147|Apis mellifera doublesex protein.
          Length = 147

 Score = 21.0 bits (42), Expect = 5.1
 Identities = 6/10 (60%), Positives = 7/10 (70%)
 Frame = +2

Query: 89  C*CMCHRCKI 118
           C C C +CKI
Sbjct: 2   CYCTCEKCKI 11


>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 21.0 bits (42), Expect = 5.1
 Identities = 5/13 (38%), Positives = 9/13 (69%)
 Frame = +2

Query: 341 NATCGWRSRVRVI 379
           N  CGW++  R++
Sbjct: 150 NCNCGWKNPSRIV 162


>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 20.6 bits (41), Expect = 6.7
 Identities = 12/40 (30%), Positives = 20/40 (50%)
 Frame = +1

Query: 82  IKLLMYVSQM*NK*NRNKITGTYITKQEDIRFEKDFETAN 201
           I +LM + +   K    K+T + I  Q  + F   FET++
Sbjct: 271 INMLMELQKNPQKLENIKLTDSLIAAQAFVFFLAGFETSS 310


>AY540846-1|AAS48080.1|  541|Apis mellifera neuronal nicotinic
           acetylcholine receptorApisa2 subunit protein.
          Length = 541

 Score = 20.2 bits (40), Expect = 8.8
 Identities = 8/16 (50%), Positives = 8/16 (50%)
 Frame = -1

Query: 351 HVAFGALIGKHTTKAH 304
           H   G   G HTT AH
Sbjct: 399 HQRIGGCNGLHTTTAH 414


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 95,086
Number of Sequences: 438
Number of extensions: 1636
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used:  9638226
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)