Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP13_F_H21
         (496 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_02_0040 + 4482853-4482988,4483111-4483224,4485372-4485514          169   8e-43
03_02_0370 + 7853646-7853772,7854508-7854621,7855152-7855294          169   8e-43
06_01_0239 - 1819316-1819458,1820578-1820691,1820794-1820923          169   1e-42
03_02_0020 - 5045900-5046211,5046233-5046290,5046604-5047242,504...    50   8e-07
03_06_0314 - 33077621-33077869,33078218-33078280,33079392-330794...    34   0.055
06_02_0345 + 14833838-14833997,14834095-14834552,14834633-148348...    29   2.7  
05_05_0026 + 21645845-21647404                                         27   8.3  

>10_02_0040 + 4482853-4482988,4483111-4483224,4485372-4485514
          Length = 130

 Score =  169 bits (412), Expect = 8e-43
 Identities = 77/102 (75%), Positives = 93/102 (91%)
 Frame = +3

Query: 165 IHRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSKT 344
           ++RIRITL+S+NV++LEKVCADL+ GAK ++LRVKGPVR+PTK+L ITTRK+PCGEG+ T
Sbjct: 28  LNRIRITLSSKNVKNLEKVCADLVKGAKDKQLRVKGPVRIPTKVLHITTRKSPCGEGTNT 87

Query: 345 WDRFQMRIHKRVIDLHSPSEIVKQITSINIEPGVEVEVTIAD 470
           WDRF+ RIHKRVIDL S  ++VKQITSI IEPGVEVEVTIAD
Sbjct: 88  WDRFEFRIHKRVIDLISSPDVVKQITSITIEPGVEVEVTIAD 129


>03_02_0370 + 7853646-7853772,7854508-7854621,7855152-7855294
          Length = 127

 Score =  169 bits (412), Expect = 8e-43
 Identities = 77/102 (75%), Positives = 93/102 (91%)
 Frame = +3

Query: 165 IHRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSKT 344
           ++RIRITL+S+NV++LEKVCADL+ GAK ++LRVKGPVR+PTK+L ITTRK+PCGEG+ T
Sbjct: 25  LNRIRITLSSKNVKNLEKVCADLVKGAKDKQLRVKGPVRIPTKVLHITTRKSPCGEGTNT 84

Query: 345 WDRFQMRIHKRVIDLHSPSEIVKQITSINIEPGVEVEVTIAD 470
           WDRF+ RIHKRVIDL S  ++VKQITSI IEPGVEVEVTIAD
Sbjct: 85  WDRFEFRIHKRVIDLISSPDVVKQITSITIEPGVEVEVTIAD 126


>06_01_0239 - 1819316-1819458,1820578-1820691,1820794-1820923
          Length = 128

 Score =  169 bits (411), Expect = 1e-42
 Identities = 75/101 (74%), Positives = 92/101 (91%)
 Frame = +3

Query: 168 HRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSKTW 347
           HRIRITL+S++V++LEKVC DL+ GAK + L+VKGPVRMPTK+L ITTRK+PCGEG+ TW
Sbjct: 27  HRIRITLSSKSVKNLEKVCGDLVKGAKDKSLKVKGPVRMPTKVLHITTRKSPCGEGTNTW 86

Query: 348 DRFQMRIHKRVIDLHSPSEIVKQITSINIEPGVEVEVTIAD 470
           DRF+MR+HKRVIDL S +++VKQITSI IEPGVEVEVTI+D
Sbjct: 87  DRFEMRVHKRVIDLVSSADVVKQITSITIEPGVEVEVTISD 127


>03_02_0020 -
           5045900-5046211,5046233-5046290,5046604-5047242,
           5048475-5048515,5048672-5048728,5048952-5049140
          Length = 431

 Score = 50.4 bits (115), Expect = 8e-07
 Identities = 30/99 (30%), Positives = 50/99 (50%), Gaps = 1/99 (1%)
 Frame = +3

Query: 171 RIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSKTWD 350
           +IRI L S  V  +E  C  +I  AK    +  GPV +PTK        +P       + 
Sbjct: 334 KIRIKLRSYWVPLIEDSCKKIIEAAKTTNAKTMGPVPLPTKRRVYCVLNSPHVHKDSRF- 392

Query: 351 RFQMRIHKRVIDLHSP-SEIVKQITSINIEPGVEVEVTI 464
            F++R H+R+ID+  P ++ +  +  + +  GV+VEV +
Sbjct: 393 HFEIRTHQRLIDIMYPTAQTIDSLMQLQLPAGVDVEVKL 431


>03_06_0314 -
           33077621-33077869,33078218-33078280,33079392-33079449,
           33079534-33079688,33079797-33080106,33080634-33080890,
           33081280-33081359,33083888-33083948
          Length = 410

 Score = 34.3 bits (75), Expect = 0.055
 Identities = 21/77 (27%), Positives = 40/77 (51%), Gaps = 4/77 (5%)
 Frame = +2

Query: 62  D*KVVYLGRNSTSNMAAAVVSGKD---IEKPQAEVSPYPPHQDHSYFSQ-CALAREGLC* 229
           D +V       TS +A  V +G++   ++K + + +     +  S +++ C LA EGL  
Sbjct: 105 DWEVALASTTMTSLVAVLVATGEEGSNLKKAKCQHNAADHERQRSLWARVCRLAAEGLVT 164

Query: 230 PNQWSQETEAACKGPSP 280
            ++W++   A  +GPSP
Sbjct: 165 ASKWARPGRAGTRGPSP 181


>06_02_0345 +
           14833838-14833997,14834095-14834552,14834633-14834870,
           14834974-14835431,14836554-14836955
          Length = 571

 Score = 28.7 bits (61), Expect = 2.7
 Identities = 18/48 (37%), Positives = 23/48 (47%), Gaps = 5/48 (10%)
 Frame = +2

Query: 173 HQDHSYFSQCALAREGLC*PNQWSQETEAACKG--PSPH---ANQDPA 301
           H   S   +CAL R+G     +W  ET   C G  P+P     +QDPA
Sbjct: 11  HHLQSTLFECALLRDGRAESFEWLFETFKNCMGNCPTPRCILTDQDPA 58


>05_05_0026 + 21645845-21647404
          Length = 519

 Score = 27.1 bits (57), Expect = 8.3
 Identities = 13/35 (37%), Positives = 22/35 (62%)
 Frame = -1

Query: 253 CFLAPLIRSAQTFSSERTLREVRVILMRWIRGDLC 149
           C L PL+RSA ++ SER L +++ +  R+    +C
Sbjct: 171 CRLIPLLRSASSYGSERLL-DLQDVFRRFAFDCIC 204


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,610,538
Number of Sequences: 37544
Number of extensions: 296320
Number of successful extensions: 783
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 766
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 782
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1035514020
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)