Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP13_F_H21
         (496 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Y11119-1|CAA72004.1|  120|Drosophila melanogaster S20 ribosomal ...   198   3e-51
AY071742-1|AAL49364.1|  120|Drosophila melanogaster RH47995p pro...   198   3e-51
AE014297-2870|AAF55809.1|  120|Drosophila melanogaster CG15693-P...   198   3e-51
AY071353-1|AAL48975.1|  120|Drosophila melanogaster RE38972p pro...   194   7e-50
M97192-1|AAA28575.1|  991|Drosophila melanogaster glutamate rece...    30   2.0  
BT003218-1|AAO24973.1|  726|Drosophila melanogaster RE03717p pro...    30   2.0  
AE014296-1137|AAF50652.2|  991|Drosophila melanogaster CG8442-PA...    30   2.0  
BT003797-1|AAO41480.1|  606|Drosophila melanogaster AT31792p pro...    28   6.0  
AE014296-2437|ABI31253.1|  587|Drosophila melanogaster CG17839-P...    28   6.0  
AE014296-2436|AAS65009.2| 1656|Drosophila melanogaster CG17839-P...    28   6.0  

>Y11119-1|CAA72004.1|  120|Drosophila melanogaster S20 ribosomal
           protein protein.
          Length = 120

 Score =  198 bits (484), Expect = 3e-51
 Identities = 94/105 (89%), Positives = 98/105 (93%)
 Frame = +3

Query: 156 SPLIHRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEG 335
           S  +HRIRITLTSRNVRSLE VC DLINGAK Q LRVKGPVRMPTK LRITTRKTPCGEG
Sbjct: 16  SASVHRIRITLTSRNVRSLENVCRDLINGAKNQNLRVKGPVRMPTKTLRITTRKTPCGEG 75

Query: 336 SKTWDRFQMRIHKRVIDLHSPSEIVKQITSINIEPGVEVEVTIAD 470
           SKTWDRFQMRIHKR+IDLHSPSEIVK+ITSINIEPGVEVEVTIA+
Sbjct: 76  SKTWDRFQMRIHKRIIDLHSPSEIVKKITSINIEPGVEVEVTIAN 120


>AY071742-1|AAL49364.1|  120|Drosophila melanogaster RH47995p
           protein.
          Length = 120

 Score =  198 bits (484), Expect = 3e-51
 Identities = 94/105 (89%), Positives = 98/105 (93%)
 Frame = +3

Query: 156 SPLIHRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEG 335
           S  +HRIRITLTSRNVRSLE VC DLINGAK Q LRVKGPVRMPTK LRITTRKTPCGEG
Sbjct: 16  SASVHRIRITLTSRNVRSLENVCRDLINGAKNQNLRVKGPVRMPTKTLRITTRKTPCGEG 75

Query: 336 SKTWDRFQMRIHKRVIDLHSPSEIVKQITSINIEPGVEVEVTIAD 470
           SKTWDRFQMRIHKR+IDLHSPSEIVK+ITSINIEPGVEVEVTIA+
Sbjct: 76  SKTWDRFQMRIHKRIIDLHSPSEIVKKITSINIEPGVEVEVTIAN 120


>AE014297-2870|AAF55809.1|  120|Drosophila melanogaster CG15693-PA
           protein.
          Length = 120

 Score =  198 bits (484), Expect = 3e-51
 Identities = 94/105 (89%), Positives = 98/105 (93%)
 Frame = +3

Query: 156 SPLIHRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEG 335
           S  +HRIRITLTSRNVRSLE VC DLINGAK Q LRVKGPVRMPTK LRITTRKTPCGEG
Sbjct: 16  SASVHRIRITLTSRNVRSLENVCRDLINGAKNQNLRVKGPVRMPTKTLRITTRKTPCGEG 75

Query: 336 SKTWDRFQMRIHKRVIDLHSPSEIVKQITSINIEPGVEVEVTIAD 470
           SKTWDRFQMRIHKR+IDLHSPSEIVK+ITSINIEPGVEVEVTIA+
Sbjct: 76  SKTWDRFQMRIHKRIIDLHSPSEIVKKITSINIEPGVEVEVTIAN 120


>AY071353-1|AAL48975.1|  120|Drosophila melanogaster RE38972p
           protein.
          Length = 120

 Score =  194 bits (472), Expect = 7e-50
 Identities = 92/105 (87%), Positives = 97/105 (92%)
 Frame = +3

Query: 156 SPLIHRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEG 335
           S  +H IRITLTSRNVRSLE VC DLINGAK Q LRV+GPVRMPTK LRITTRKTPCGEG
Sbjct: 16  SASVHCIRITLTSRNVRSLENVCRDLINGAKNQNLRVEGPVRMPTKTLRITTRKTPCGEG 75

Query: 336 SKTWDRFQMRIHKRVIDLHSPSEIVKQITSINIEPGVEVEVTIAD 470
           SKTWDRFQMRIHKR+IDLHSPSEIVK+ITSINIEPGVEVEVTIA+
Sbjct: 76  SKTWDRFQMRIHKRIIDLHSPSEIVKKITSINIEPGVEVEVTIAN 120


>M97192-1|AAA28575.1|  991|Drosophila melanogaster glutamate
           receptor subunit kainatesubtype protein.
          Length = 991

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 10/30 (33%), Positives = 18/30 (60%)
 Frame = +2

Query: 89  NSTSNMAAAVVSGKDIEKPQAEVSPYPPHQ 178
           +ST+     ++ G  + +PQA V P PP++
Sbjct: 648 DSTAQQPPGIIGGATLSEPQAHVPPVPPNE 677


>BT003218-1|AAO24973.1|  726|Drosophila melanogaster RE03717p
           protein.
          Length = 726

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 10/30 (33%), Positives = 18/30 (60%)
 Frame = +2

Query: 89  NSTSNMAAAVVSGKDIEKPQAEVSPYPPHQ 178
           +ST+     ++ G  + +PQA V P PP++
Sbjct: 383 DSTAQQPPGIIGGATLSEPQAHVPPVPPNE 412


>AE014296-1137|AAF50652.2|  991|Drosophila melanogaster CG8442-PA
           protein.
          Length = 991

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 10/30 (33%), Positives = 18/30 (60%)
 Frame = +2

Query: 89  NSTSNMAAAVVSGKDIEKPQAEVSPYPPHQ 178
           +ST+     ++ G  + +PQA V P PP++
Sbjct: 648 DSTAQQPPGIIGGATLSEPQAHVPPVPPNE 677


>BT003797-1|AAO41480.1|  606|Drosophila melanogaster AT31792p
           protein.
          Length = 606

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 11/29 (37%), Positives = 17/29 (58%)
 Frame = -3

Query: 182 DPDAVDKGRPLPGVSRCLCLTLQRLPCCL 96
           DP+A +  R  PG+ RC+      +PCC+
Sbjct: 212 DPEACE--RDFPGIVRCMADGRNHVPCCV 238


>AE014296-2437|ABI31253.1|  587|Drosophila melanogaster CG17839-PC,
           isoform C protein.
          Length = 587

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 11/29 (37%), Positives = 17/29 (58%)
 Frame = -3

Query: 182 DPDAVDKGRPLPGVSRCLCLTLQRLPCCL 96
           DP+A +  R  PG+ RC+      +PCC+
Sbjct: 212 DPEACE--RDFPGIVRCMADGRNHVPCCV 238


>AE014296-2436|AAS65009.2| 1656|Drosophila melanogaster CG17839-PB,
           isoform B protein.
          Length = 1656

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 11/29 (37%), Positives = 17/29 (58%)
 Frame = -3

Query: 182 DPDAVDKGRPLPGVSRCLCLTLQRLPCCL 96
           DP+A +  R  PG+ RC+      +PCC+
Sbjct: 212 DPEACE--RDFPGIVRCMADGRNHVPCCV 238


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,339,526
Number of Sequences: 53049
Number of extensions: 493173
Number of successful extensions: 1344
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1244
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1339
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1742533632
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)