Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP13_F_H18
         (332 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_02_0445 - 8551912-8552047,8552729-8552896,8553785-8554068,855...    28   1.6  
11_06_0085 - 19905784-19906510,19907428-19907557,19907739-19907874     26   6.4  
06_01_0089 + 715820-716085,716178-717015                               26   6.4  
04_04_0514 - 25816808-25817318,25817865-25817994,25818083-25818215     26   6.4  
02_04_0353 + 22287313-22287448,22287573-22287702,22288605-22289367     26   6.4  
07_03_0525 - 19044978-19045508                                         26   8.5  

>03_02_0445 -
           8551912-8552047,8552729-8552896,8553785-8554068,
           8554143-8555386,8556901-8556967,8557059-8557150,
           8557269-8557480,8558541-8558623,8559092-8559122,
           8559770-8559951,8560557-8560616,8561092-8561289,
           8561485-8561539,8562740-8562855,8563012-8563176,
           8563310-8563483,8564134-8564333,8564778-8564882,
           8565063-8565126,8566452-8566718
          Length = 1300

 Score = 28.3 bits (60), Expect = 1.6
 Identities = 12/40 (30%), Positives = 21/40 (52%)
 Frame = +2

Query: 146 NLLTNGFMNVDSCR*QVTADFRKSGLTHASSLLVKQSISC 265
           N++TNG MN  SC+     D+ +    + + LL+   + C
Sbjct: 410 NIVTNGSMNGRSCQDGSDTDYSEDASDYENVLLITGPVGC 449


>11_06_0085 - 19905784-19906510,19907428-19907557,19907739-19907874
          Length = 330

 Score = 26.2 bits (55), Expect = 6.4
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = +2

Query: 263 CETPMGVRXNPWTPQNE 313
           C+  +GV+  PWTP+ +
Sbjct: 7   CDNGVGVKKGPWTPEED 23


>06_01_0089 + 715820-716085,716178-717015
          Length = 367

 Score = 26.2 bits (55), Expect = 6.4
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = +2

Query: 251 QSISCETPMGVRXNPWTPQNEK 316
           +S  CE    V+  PWTP+ +K
Sbjct: 3   RSPCCEQDADVKKGPWTPEEDK 24


>04_04_0514 - 25816808-25817318,25817865-25817994,25818083-25818215
          Length = 257

 Score = 26.2 bits (55), Expect = 6.4
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +2

Query: 263 CETPMGVRXNPWTPQNEK 316
           C   MG++  PWTP+ +K
Sbjct: 6   CCEKMGLKKGPWTPEEDK 23


>02_04_0353 + 22287313-22287448,22287573-22287702,22288605-22289367
          Length = 342

 Score = 26.2 bits (55), Expect = 6.4
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = +2

Query: 251 QSISCETPMGVRXNPWTPQNEK 316
           +S  CE   G++  PWTP+ ++
Sbjct: 3   RSPCCEKEAGLKKGPWTPEEDQ 24


>07_03_0525 - 19044978-19045508
          Length = 176

 Score = 25.8 bits (54), Expect = 8.5
 Identities = 10/17 (58%), Positives = 11/17 (64%)
 Frame = -2

Query: 319 ALFVLWSPWVXANAHRS 269
           AL V WSPW+  N  RS
Sbjct: 81  ALDVKWSPWIENNEERS 97


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,367,971
Number of Sequences: 37544
Number of extensions: 140576
Number of successful extensions: 218
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 216
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 218
length of database: 14,793,348
effective HSP length: 72
effective length of database: 12,090,180
effective search space used: 459426840
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)