Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP13_F_H16
         (357 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY118652-1|AAM50021.1| 1331|Drosophila melanogaster SD06851p pro...    28   4.0  
AE013599-2130|AAO41388.1| 1331|Drosophila melanogaster CG8291-PC...    28   4.0  
AE013599-2129|AAM70967.2| 1331|Drosophila melanogaster CG8291-PB...    28   4.0  
AE013599-2128|AAF58096.2| 1331|Drosophila melanogaster CG8291-PA...    28   4.0  
AY113436-1|AAM29441.1|  475|Drosophila melanogaster RE27026p pro...    27   7.0  
AY061012-1|AAL28560.1|  475|Drosophila melanogaster HL02815p pro...    27   7.0  
AE014296-3590|AAF51756.2|  475|Drosophila melanogaster CG11306-P...    27   7.0  
AL009195-1|CAA15708.1| 3345|Drosophila melanogaster EG:30B8.4,FB...    27   9.3  

>AY118652-1|AAM50021.1| 1331|Drosophila melanogaster SD06851p
           protein.
          Length = 1331

 Score = 27.9 bits (59), Expect = 4.0
 Identities = 17/60 (28%), Positives = 30/60 (50%), Gaps = 3/60 (5%)
 Frame = +3

Query: 129 DN*MSESGSDLDATEHTALMDGHIAXARPDRELAERIARKRKT---KSDNQRXYGVRFNR 299
           DN + E  + L+  +   ++DGH +  R  R     ++RK+K+   KS++Q      F R
Sbjct: 193 DNYLEEMDNALNREDSLIIIDGHTSLKREPRTRTLPLSRKKKSSKKKSEDQEAAQGDFQR 252


>AE013599-2130|AAO41388.1| 1331|Drosophila melanogaster CG8291-PC,
           isoform C protein.
          Length = 1331

 Score = 27.9 bits (59), Expect = 4.0
 Identities = 17/60 (28%), Positives = 30/60 (50%), Gaps = 3/60 (5%)
 Frame = +3

Query: 129 DN*MSESGSDLDATEHTALMDGHIAXARPDRELAERIARKRKT---KSDNQRXYGVRFNR 299
           DN + E  + L+  +   ++DGH +  R  R     ++RK+K+   KS++Q      F R
Sbjct: 193 DNYLEEMDNALNREDSLIIIDGHTSLKREPRTRTLPLSRKKKSSKKKSEDQEAAQGDFQR 252


>AE013599-2129|AAM70967.2| 1331|Drosophila melanogaster CG8291-PB,
           isoform B protein.
          Length = 1331

 Score = 27.9 bits (59), Expect = 4.0
 Identities = 17/60 (28%), Positives = 30/60 (50%), Gaps = 3/60 (5%)
 Frame = +3

Query: 129 DN*MSESGSDLDATEHTALMDGHIAXARPDRELAERIARKRKT---KSDNQRXYGVRFNR 299
           DN + E  + L+  +   ++DGH +  R  R     ++RK+K+   KS++Q      F R
Sbjct: 193 DNYLEEMDNALNREDSLIIIDGHTSLKREPRTRTLPLSRKKKSSKKKSEDQEAAQGDFQR 252


>AE013599-2128|AAF58096.2| 1331|Drosophila melanogaster CG8291-PA,
           isoform A protein.
          Length = 1331

 Score = 27.9 bits (59), Expect = 4.0
 Identities = 17/60 (28%), Positives = 30/60 (50%), Gaps = 3/60 (5%)
 Frame = +3

Query: 129 DN*MSESGSDLDATEHTALMDGHIAXARPDRELAERIARKRKT---KSDNQRXYGVRFNR 299
           DN + E  + L+  +   ++DGH +  R  R     ++RK+K+   KS++Q      F R
Sbjct: 193 DNYLEEMDNALNREDSLIIIDGHTSLKREPRTRTLPLSRKKKSSKKKSEDQEAAQGDFQR 252


>AY113436-1|AAM29441.1|  475|Drosophila melanogaster RE27026p
           protein.
          Length = 475

 Score = 27.1 bits (57), Expect = 7.0
 Identities = 11/32 (34%), Positives = 19/32 (59%)
 Frame = -2

Query: 356 KQVFLEFSXWVGKKTNP*LTVKPNAIGALIIG 261
           K VFL+   W+  K  P  T+   +IG++++G
Sbjct: 111 KFVFLKQRHWIEAKNYPHFTLLGQSIGSMVVG 142


>AY061012-1|AAL28560.1|  475|Drosophila melanogaster HL02815p
           protein.
          Length = 475

 Score = 27.1 bits (57), Expect = 7.0
 Identities = 11/32 (34%), Positives = 19/32 (59%)
 Frame = -2

Query: 356 KQVFLEFSXWVGKKTNP*LTVKPNAIGALIIG 261
           K VFL+   W+  K  P  T+   +IG++++G
Sbjct: 111 KFVFLKQRHWIEAKNYPHFTLLGQSIGSMVVG 142


>AE014296-3590|AAF51756.2|  475|Drosophila melanogaster CG11306-PA
           protein.
          Length = 475

 Score = 27.1 bits (57), Expect = 7.0
 Identities = 11/32 (34%), Positives = 19/32 (59%)
 Frame = -2

Query: 356 KQVFLEFSXWVGKKTNP*LTVKPNAIGALIIG 261
           K VFL+   W+  K  P  T+   +IG++++G
Sbjct: 111 KFVFLKQRHWIEAKNYPHFTLLGQSIGSMVVG 142


>AL009195-1|CAA15708.1| 3345|Drosophila melanogaster
           EG:30B8.4,FBgn0003048;pcx protein.
          Length = 3345

 Score = 26.6 bits (56), Expect = 9.3
 Identities = 13/26 (50%), Positives = 17/26 (65%), Gaps = 2/26 (7%)
 Frame = +1

Query: 16  LWFYLLCREF--YLCVFLRYYAYAYI 87
           LW YLLC  F  YL VFL+Y+   ++
Sbjct: 38  LWLYLLCSPFVAYL-VFLQYFPSTWL 62


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,113,923
Number of Sequences: 53049
Number of extensions: 169198
Number of successful extensions: 261
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 259
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 261
length of database: 24,988,368
effective HSP length: 76
effective length of database: 20,956,644
effective search space used: 880179048
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)