Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP13_F_H07
         (433 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF039051-8|AAB94268.3|  309|Caenorhabditis elegans Serpentine re...    28   3.3  
Z99280-1|CAB16499.1|  225|Caenorhabditis elegans Hypothetical pr...    27   4.4  
Z82086-3|CAB04997.1|  325|Caenorhabditis elegans Hypothetical pr...    27   7.7  

>AF039051-8|AAB94268.3|  309|Caenorhabditis elegans Serpentine
           receptor, class x protein7 protein.
          Length = 309

 Score = 27.9 bits (59), Expect = 3.3
 Identities = 15/43 (34%), Positives = 21/43 (48%)
 Frame = +3

Query: 6   VTLRRTKQTIKMFKYLIFVALLAFASAKPLLVSYTSPXSCCIY 134
           +TL RT         L+F+ ++A ASA      Y  P  CCI+
Sbjct: 111 ITLNRTNVFTFCRTLLLFIPIIAVASAAATFSQYIFP--CCIF 151


>Z99280-1|CAB16499.1|  225|Caenorhabditis elegans Hypothetical
          protein Y57G11B.5 protein.
          Length = 225

 Score = 27.5 bits (58), Expect = 4.4
 Identities = 12/19 (63%), Positives = 15/19 (78%)
 Frame = +3

Query: 39 MFKYLIFVALLAFASAKPL 95
          MFK L+F ALLA+A A P+
Sbjct: 1  MFKSLVFSALLAYAVAAPM 19


>Z82086-3|CAB04997.1|  325|Caenorhabditis elegans Hypothetical
           protein ZK228.6 protein.
          Length = 325

 Score = 26.6 bits (56), Expect = 7.7
 Identities = 14/38 (36%), Positives = 21/38 (55%)
 Frame = -1

Query: 427 IIYFYFRKKXQLYHSSSGFQAPGRKKNQSRIILFCIGI 314
           +I+F F+    LYH+ S  QA  R + Q  + L CI +
Sbjct: 209 VIFFVFQISWYLYHTVSQSQATNRLQKQFFVAL-CIQV 245


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,619,567
Number of Sequences: 27780
Number of extensions: 120672
Number of successful extensions: 374
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 369
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 374
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 724655464
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)