Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP13_F_G23
         (561 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_06_0217 - 21353558-21353660,21354680-21355510,21356340-213564...    32   0.27 
05_04_0393 - 20895485-20895645,20895750-20896358,20896541-208966...    31   0.83 
04_04_0811 - 28246801-28247049,28247161-28247384,28248236-282484...    30   1.5  
08_02_1198 + 25204896-25206755                                         29   2.5  
12_01_0785 - 7171224-7171485,7172867-7173310,7175134-7175597           28   4.4  
12_01_0613 + 5060150-5060320,5062255-5062359,5064057-5064143,506...    28   4.4  
01_07_0031 - 40603243-40603491,40603617-40603799,40603896-406040...    27   7.7  

>11_06_0217 -
           21353558-21353660,21354680-21355510,21356340-21356464,
           21356546-21357076,21357207-21357650,21358469-21358612
          Length = 725

 Score = 32.3 bits (70), Expect = 0.27
 Identities = 14/40 (35%), Positives = 18/40 (45%)
 Frame = -2

Query: 188 GCNVLCVXPCPAVSIAPTGLWPGPR*GAGCERQEFLVRFN 69
           GC   C   C      P G+WPGP  G GC  ++    +N
Sbjct: 17  GCGYSCEASCHG---RPRGIWPGPPLGLGCGSRDMKQYYN 53


>05_04_0393 -
           20895485-20895645,20895750-20896358,20896541-20896616,
           20896729-20896920,20897118-20897438,20897880-20898119,
           20898205-20898522,20898621-20898678,20898778-20898936,
           20900090-20900308,20900400-20900614
          Length = 855

 Score = 30.7 bits (66), Expect = 0.83
 Identities = 16/44 (36%), Positives = 23/44 (52%)
 Frame = -3

Query: 244 DLRRIVPIERRYNMWDGGMDVMCSASXPVPPFQ*PRLGSGPVRG 113
           D R I P++ RY  WD  M V+ + S  V PF+   + + P  G
Sbjct: 60  DRRVISPLDSRYRCWDTFMVVLVAYSAWVYPFEVAFMNASPKGG 103


>04_04_0811 -
           28246801-28247049,28247161-28247384,28248236-28248435,
           28248612-28248888,28249035-28249104
          Length = 339

 Score = 29.9 bits (64), Expect = 1.5
 Identities = 16/36 (44%), Positives = 17/36 (47%), Gaps = 3/36 (8%)
 Frame = +1

Query: 25  KIAGSHPRGRWGMW---ELNLTKNSCRSQPAPYLGP 123
           K+ G   R RW  W   E  LT  SCR  PAP   P
Sbjct: 33  KVYGRGGRRRWERWVEREFVLTPASCREVPAPVAPP 68


>08_02_1198 + 25204896-25206755
          Length = 619

 Score = 29.1 bits (62), Expect = 2.5
 Identities = 14/48 (29%), Positives = 25/48 (52%)
 Frame = -1

Query: 354 PKRNPTERETSEQGRDHSLRQQHGANRPQHRRGRRDQTFAALCPLNEG 211
           P+ + ++     +     +R++H ++R  H RGR DQ    + P NEG
Sbjct: 328 PRSSSSKDNVGRRQPTAQIREEHTSSR--HNRGRHDQQPNQVLPSNEG 373


>12_01_0785 - 7171224-7171485,7172867-7173310,7175134-7175597
          Length = 389

 Score = 28.3 bits (60), Expect = 4.4
 Identities = 15/37 (40%), Positives = 18/37 (48%)
 Frame = +3

Query: 90  LPLTTGALPRTGPEPSRGY*NGGTGXDAEHITSIPPS 200
           +PL+  AL   GPE  RG  NG        +T I PS
Sbjct: 287 IPLSGSALSHDGPEAPRGMQNGVETCGKPVLTGITPS 323


>12_01_0613 +
           5060150-5060320,5062255-5062359,5064057-5064143,
           5064265-5064318,5064402-5064547,5064651-5064804,
           5064891-5065028,5065454-5065527,5065615-5065756,
           5066396-5066474,5067326-5067423
          Length = 415

 Score = 28.3 bits (60), Expect = 4.4
 Identities = 17/59 (28%), Positives = 24/59 (40%)
 Frame = +2

Query: 32  PDPTRAAGGVCGS*TSLKTPAAHNRRPTSDRARAQSGLLKXXXXXXXXAHYIHPTVPHV 208
           PDP      V  S  S+  P    +  + DR  A +GLL+          +I PT P +
Sbjct: 175 PDPDVPQSCVNSSEPSISLPGTKPKSASDDRDFALAGLLQEKSWGRLGPQWIRPTPPRL 233


>01_07_0031 -
           40603243-40603491,40603617-40603799,40603896-40604084,
           40604244-40604916,40605583-40605737
          Length = 482

 Score = 27.5 bits (58), Expect = 7.7
 Identities = 15/41 (36%), Positives = 19/41 (46%)
 Frame = +1

Query: 157 GQGLTQSTLHPSHRPTCYTFVQWAQCGEGLVTAAPTVLWAV 279
           G G+   T +PS R T Y F   A C E  +  A  V  A+
Sbjct: 118 GSGVRGVTSNPSVRYTTYFFCSLAPCSESAILIADCVPMAM 158


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,494,845
Number of Sequences: 37544
Number of extensions: 404346
Number of successful extensions: 1128
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1093
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1127
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1281410928
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)