Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP13_F_G21
(565 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC1753.03c |rec7||meiotic recombination protein Rec7 |Schizosa... 33 0.038
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 32 0.051
SPBC19C2.09 |sre1||sterol regulatory element binding protein Sre... 31 0.15
SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31 |Schizo... 30 0.27
SPAC23C4.12 |hhp2||serine/threonine protein kinase Hhp2 |Schizos... 29 0.62
SPBP4H10.11c |||long-chain-fatty-acid-CoA ligase |Schizosaccharo... 28 1.1
SPAC1D4.08 |pis1||CDP-diacylglycerol--inositol 3-phosphatidyltra... 27 1.4
SPBP23A10.14c |ell1||RNA polymerase II transcription elongation ... 27 1.4
SPBC21.05c |ral2||Ras guanyl-nucleotide exchange factor Ral2 |Sc... 27 1.4
SPBC146.13c |myo1||myosin type I|Schizosaccharomyces pombe|chr 2... 27 1.4
SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr 2|||... 27 1.9
SPAC144.10c |gwt1|mug59|pig-W|Schizosaccharomyces pombe|chr 1|||... 27 2.5
SPAC824.09c |||GTPase activating protein |Schizosaccharomyces po... 27 2.5
SPBC244.01c |sid4||SIN component scaffold protein Sid4 |Schizosa... 27 2.5
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 23 2.7
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 26 3.3
SPAC1805.05 |cki3||serine/threonine protein kinase Cki3|Schizosa... 26 3.3
SPAC1B3.07c |vps28||ESCRT I complex subunit Vps28|Schizosaccharo... 26 3.3
SPAC212.11 |tlh1||RecQ type DNA helicase|Schizosaccharomyces pom... 26 3.3
SPBCPT2R1.08c |tlh2||RecQ type DNA helicase Tlh1|Schizosaccharom... 26 3.3
SPBC646.14c |orc5||origin recognition complex subunit Orc5|Schiz... 26 4.4
SPBC36B7.03 |sec63||ER protein translocation subcomplex subunit ... 26 4.4
SPAC3G6.09c |tps2||trehalose-phosphate synthase Tps2 |Schizosacc... 26 4.4
SPAC30.01c |sec72|sec7b|Sec7 domain|Schizosaccharomyces pombe|ch... 26 4.4
SPAC17H9.02 |||ATP-dependent RNA helicase Mtr4-like |Schizosacch... 25 5.8
SPAC30D11.14c |||RNA-binding protein |Schizosaccharomyces pombe|... 25 5.8
SPBC29A3.16 |||ribosome biogenesis protein Rrs1 |Schizosaccharom... 25 7.7
SPBC1289.15 ||SPBC8E4.07c|glycoprotein |Schizosaccharomyces pomb... 25 7.7
>SPCC1753.03c |rec7||meiotic recombination protein Rec7
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 339
Score = 32.7 bits (71), Expect = 0.038
Identities = 20/77 (25%), Positives = 36/77 (46%), Gaps = 1/77 (1%)
Frame = +2
Query: 71 RSGSRTLQRDHVNYLSNNSKNL*TDTAVYSTMSGTEQNIVNSMQQLSVTQTSIGSTEKPT 250
+S S Q ++ SNNS+ L Y+ S + N++ + +TQT+ + T
Sbjct: 122 KSSSEKKQFNNSQSQSNNSQELSLMNNAYNKSSAQQPNLLLQPSYIPMTQTATTAVNNST 181
Query: 251 QVVTPA-VNRSQPSAKV 298
V PA + P+A++
Sbjct: 182 NYVNPAPLQHVMPNAEI 198
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 32.3 bits (70), Expect = 0.051
Identities = 29/105 (27%), Positives = 43/105 (40%), Gaps = 3/105 (2%)
Frame = +2
Query: 158 STMSGTEQNIVNSMQQLSVTQTSIGSTEKPTQVVTPAVNRSQPSAKVTPVKASTVSPAIA 337
++ +GT + + S T TSI T T VTP V + S+ TP ++ S
Sbjct: 322 TSSTGTSSSPLPSTSTSCTTSTSIPPTGNSTTPVTPTVPPTSTSSTSTPPPPASTSSTGT 381
Query: 338 TIDRLLSLGANIPPP---PPVITRTSDMDPHTVEQLRAVKELLTT 463
+ LLS + PP T+ + P TV + L TT
Sbjct: 382 SSSPLLSTSTSCTTSTSIPPTGNSTTPVTP-TVPPTSSSTPLTTT 425
Score = 27.1 bits (57), Expect = 1.9
Identities = 16/54 (29%), Positives = 24/54 (44%)
Frame = +2
Query: 158 STMSGTEQNIVNSMQQLSVTQTSIGSTEKPTQVVTPAVNRSQPSAKVTPVKAST 319
++ +GT + + S T TSI T T VTP V + S +T +T
Sbjct: 376 TSSTGTSSSPLLSTSTSCTTSTSIPPTGNSTTPVTPTVPPTSSSTPLTTTNCTT 429
Score = 26.6 bits (56), Expect = 2.5
Identities = 15/70 (21%), Positives = 30/70 (42%)
Frame = +2
Query: 194 SMQQLSVTQTSIGSTEKPTQVVTPAVNRSQPSAKVTPVKASTVSPAIATIDRLLSLGANI 373
S + + TS ST+ + + P + S ++ P ++ +P T+ + +
Sbjct: 257 SSTSIPIPPTSTSSTDTNSSPL-PTTSTSCTTSTSIPPTGNSTTPVTPTVPPTSTSSTST 315
Query: 374 PPPPPVITRT 403
PPPP + T
Sbjct: 316 PPPPASTSST 325
>SPBC19C2.09 |sre1||sterol regulatory element binding protein
Sre1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 900
Score = 30.7 bits (66), Expect = 0.15
Identities = 20/54 (37%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Frame = +2
Query: 266 AVNRSQPSAKVTPVKASTVSPAIATIDRLL-SLGANIPPPPPVITRTSDMDPHT 424
A+ S P A T KAST +P + LL L + + PP +T TS + PH+
Sbjct: 35 AIPSSSPLASST--KASTSTPFVENCSNLLCDLASIVEDSPPTLTNTS-LSPHS 85
>SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1224
Score = 29.9 bits (64), Expect = 0.27
Identities = 16/53 (30%), Positives = 22/53 (41%)
Frame = +2
Query: 245 PTQVVTPAVNRSQPSAKVTPVKASTVSPAIATIDRLLSLGANIPPPPPVITRT 403
P + P + +QP+A ST+ P T S A PPPP + T
Sbjct: 882 PVRSPFPGASSAQPAAMSRTSSVSTLPPPPPTASMTASAPAIASPPPPKVGET 934
Score = 25.8 bits (54), Expect = 4.4
Identities = 22/69 (31%), Positives = 35/69 (50%), Gaps = 5/69 (7%)
Frame = +2
Query: 215 TQTSIGSTEKPTQVVTPAVNRSQPSAKVTPVK-----ASTVSPAIATIDRLLSLGANIPP 379
T T+ G + P P + R+ PS + PV+ AS+ PA + R S+ + +PP
Sbjct: 856 TSTTAGWNDAPMLGQLP-MRRAAPS--MAPVRSPFPGASSAQPA--AMSRTSSV-STLPP 909
Query: 380 PPPVITRTS 406
PPP + T+
Sbjct: 910 PPPTASMTA 918
Score = 25.8 bits (54), Expect = 4.4
Identities = 14/55 (25%), Positives = 27/55 (49%)
Frame = +2
Query: 233 STEKPTQVVTPAVNRSQPSAKVTPVKASTVSPAIATIDRLLSLGANIPPPPPVIT 397
++++ + P V+ PSA ++P + P + + + + IP PPPV T
Sbjct: 1026 ASQRASAYEPPTVSVPSPSA-LSPSVTPQLPPVSSRLPPVSATRPQIPQPPPVST 1079
>SPAC23C4.12 |hhp2||serine/threonine protein kinase Hhp2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 400
Score = 28.7 bits (61), Expect = 0.62
Identities = 21/72 (29%), Positives = 30/72 (41%), Gaps = 5/72 (6%)
Frame = +2
Query: 203 QLSVTQTSIGSTEKPTQVVTPAVNRSQPSAKVTPVKASTVSPAIATIDRLLSLGANI--- 373
Q + S P QV +P V+++QP +TP +S PA S NI
Sbjct: 297 QKRAAAAAAASATAPPQVTSPMVSQTQPVNPITPNYSSIPLPAERNPKTPQSFSTNIVQC 356
Query: 374 --PPPPPVITRT 403
P P P+ R+
Sbjct: 357 ASPSPLPLSFRS 368
>SPBP4H10.11c |||long-chain-fatty-acid-CoA ligase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 689
Score = 27.9 bits (59), Expect = 1.1
Identities = 17/53 (32%), Positives = 24/53 (45%)
Frame = +2
Query: 227 IGSTEKPTQVVTPAVNRSQPSAKVTPVKASTVSPAIATIDRLLSLGANIPPPP 385
+G ++ T V + + V VK++ I T D LLSLG P PP
Sbjct: 187 LGPLKQSTWVKLIVCSSTPSEDLVELVKSTAPDVEIITYDNLLSLGKEKPQPP 239
>SPAC1D4.08 |pis1||CDP-diacylglycerol--inositol
3-phosphatidyltransferase Pis1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 251
Score = 27.5 bits (58), Expect = 1.4
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = -3
Query: 227 C*SVLRIIVALSLLYFALYLTWYCTQLYLFTS 132
C R+ + L LYF + YCT +YL++S
Sbjct: 32 CLGFTRVFLVLISLYFMSWHPNYCTIVYLYSS 63
>SPBP23A10.14c |ell1||RNA polymerase II transcription elongation
factor SpELL|Schizosaccharomyces pombe|chr 2|||Manual
Length = 533
Score = 27.5 bits (58), Expect = 1.4
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +2
Query: 191 NSMQQLSVTQTSIGSTEKPTQVVTPAVNRSQPSA 292
N ++ L+ + + IG + PT +P + SQPSA
Sbjct: 149 NGLRPLNTSASRIGLSSSPTNTPSPNLPVSQPSA 182
>SPBC21.05c |ral2||Ras guanyl-nucleotide exchange factor Ral2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 611
Score = 27.5 bits (58), Expect = 1.4
Identities = 11/31 (35%), Positives = 16/31 (51%)
Frame = -1
Query: 334 YSR*NCTSFYWCYFCGGLTSVNCRSNHLCRL 242
YS C++F +CG L C + +LC L
Sbjct: 507 YSFETCSAFLHYIYCGTLNGSYCTAKNLCNL 537
>SPBC146.13c |myo1||myosin type I|Schizosaccharomyces pombe|chr
2|||Manual
Length = 1217
Score = 27.5 bits (58), Expect = 1.4
Identities = 18/63 (28%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
Frame = +2
Query: 203 QLSVTQTSIGSTEKPTQVVTPAVNRSQPSAKVTPVKA-STVSPAIATIDRLLSLGANIPP 379
Q + TS +T K Q T + ++ PS + + S +S A + +S + +PP
Sbjct: 1039 QAAAPVTSTTTTIK--QATTVSASKPAPSTVTSAASSPSNISKPSAPVANNVSKPSAVPP 1096
Query: 380 PPP 388
PPP
Sbjct: 1097 PPP 1099
>SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 3971
Score = 27.1 bits (57), Expect = 1.9
Identities = 23/96 (23%), Positives = 46/96 (47%)
Frame = +2
Query: 119 NNSKNL*TDTAVYSTMSGTEQNIVNSMQQLSVTQTSIGSTEKPTQVVTPAVNRSQPSAKV 298
N+S + + TA+ ++ S T +++NS +T +++ +T P + + +V S
Sbjct: 523 NSSTPITSSTALNTSTSITSSSVLNS--STPITSSTVVNTSTP--ITSSSVLNSS----- 573
Query: 299 TPVKASTVSPAIATIDRLLSLGANIPPPPPVITRTS 406
TP+ +STV I R L ++ P + +S
Sbjct: 574 TPITSSTVVNTSTPITRYSVLNSSTPITSSTVLNSS 609
Score = 26.6 bits (56), Expect = 2.5
Identities = 28/102 (27%), Positives = 44/102 (43%), Gaps = 6/102 (5%)
Frame = +2
Query: 119 NNSKNL*TDTAVYSTMSGTEQNIVNSMQQLSVTQTSIGSTEKPTQVVTPAVNRSQP--SA 292
N S + + T V S+ T ++NS +T +S+ ++ P T VN S P S+
Sbjct: 1375 NTSTPITSSTVVNSSTPITSSTVLNS--STPITSSSVLNSSTPITSST-VVNTSTPITSS 1431
Query: 293 KV----TPVKASTVSPAIATIDRLLSLGANIPPPPPVITRTS 406
V TP+ +STV I L ++ P + TS
Sbjct: 1432 TVVNSSTPITSSTVVNTSTPITSSSVLNSSTPITSSTVVNTS 1473
Score = 26.6 bits (56), Expect = 2.5
Identities = 27/102 (26%), Positives = 45/102 (44%), Gaps = 6/102 (5%)
Frame = +2
Query: 119 NNSKNL*TDTAVYSTMSGTEQNIVNSMQQLSVTQTSIGSTEKPTQVVTPAVNRSQP--SA 292
N S + + T V S+ T +VN+ +T +++ ++ P T A+N S P S+
Sbjct: 2263 NTSTPITSSTVVNSSTPITSSTVVNT--STPITSSTVVNSSTPITSST-ALNTSTPITSS 2319
Query: 293 KV----TPVKASTVSPAIATIDRLLSLGANIPPPPPVITRTS 406
V TP+ +STV I L ++ P + TS
Sbjct: 2320 SVLNSSTPITSSTVVNTSTPITSSSVLNSSTPITSSTVVNTS 2361
Score = 26.6 bits (56), Expect = 2.5
Identities = 22/99 (22%), Positives = 40/99 (40%), Gaps = 3/99 (3%)
Frame = +2
Query: 119 NNSKNL*TDTAVYSTMSGTEQNIVNSMQQLS---VTQTSIGSTEKPTQVVTPAVNRSQPS 289
N+S + + T V ++ T +++NS ++ V TS T + ++ S
Sbjct: 2323 NSSTPITSSTVVNTSTPITSSSVLNSSTPITSSTVVNTSTPITSSTALNTSTSITSSSVL 2382
Query: 290 AKVTPVKASTVSPAIATIDRLLSLGANIPPPPPVITRTS 406
TP+ +STV I L ++ P + TS
Sbjct: 2383 NSSTPITSSTVVNTSTPITSSSVLNSSTPITSSTVVNTS 2421
Score = 26.2 bits (55), Expect = 3.3
Identities = 25/96 (26%), Positives = 42/96 (43%)
Frame = +2
Query: 119 NNSKNL*TDTAVYSTMSGTEQNIVNSMQQLSVTQTSIGSTEKPTQVVTPAVNRSQPSAKV 298
N+S + + T V S+ T +VN+ +T +++ +T P T VN S
Sbjct: 1339 NSSTPITSSTVVNSSTPITSSTVVNT--STPITSSTVVNTSTPITSST-VVNSS------ 1389
Query: 299 TPVKASTVSPAIATIDRLLSLGANIPPPPPVITRTS 406
TP+ +STV + I L ++ P + TS
Sbjct: 1390 TPITSSTVLNSSTPITSSSVLNSSTPITSSTVVNTS 1425
Score = 26.2 bits (55), Expect = 3.3
Identities = 25/96 (26%), Positives = 42/96 (43%)
Frame = +2
Query: 119 NNSKNL*TDTAVYSTMSGTEQNIVNSMQQLSVTQTSIGSTEKPTQVVTPAVNRSQPSAKV 298
N+S + + T V S+ T +VN+ +T +++ +T P T VN S
Sbjct: 2179 NSSTPITSSTVVNSSTPITSSTVVNT--STPITSSTVVNTSTPITSST-VVNSS------ 2229
Query: 299 TPVKASTVSPAIATIDRLLSLGANIPPPPPVITRTS 406
TP+ +STV + I L ++ P + TS
Sbjct: 2230 TPITSSTVLNSSTPITSSSVLNSSTPITSSTVVNTS 2265
Score = 25.8 bits (54), Expect = 4.4
Identities = 24/96 (25%), Positives = 44/96 (45%)
Frame = +2
Query: 119 NNSKNL*TDTAVYSTMSGTEQNIVNSMQQLSVTQTSIGSTEKPTQVVTPAVNRSQPSAKV 298
N+S + + TA+ ++ T +++NS +T +++ +T P T VN S
Sbjct: 2467 NSSTPITSSTALNTSTPITSSSVLNS--STPITSSTVVNTSTPITSST-VVNSS------ 2517
Query: 299 TPVKASTVSPAIATIDRLLSLGANIPPPPPVITRTS 406
TP+ +STV + I L ++ P + TS
Sbjct: 2518 TPITSSTVLNSSTPITSSSVLNSSTPITSSTVVNTS 2553
Score = 25.4 bits (53), Expect = 5.8
Identities = 22/96 (22%), Positives = 45/96 (46%)
Frame = +2
Query: 119 NNSKNL*TDTAVYSTMSGTEQNIVNSMQQLSVTQTSIGSTEKPTQVVTPAVNRSQPSAKV 298
N+S + + TA+ ++ S T +++NS +T +++ +T P + + +V S
Sbjct: 1291 NSSTPITSSTALNTSTSITSSSVLNS--STPITSSTVVNTSTP--ITSSSVLNSS----- 1341
Query: 299 TPVKASTVSPAIATIDRLLSLGANIPPPPPVITRTS 406
TP+ +STV + I + + P + TS
Sbjct: 1342 TPITSSTVVNSSTPITSSTVVNTSTPITSSTVVNTS 1377
>SPAC144.10c |gwt1|mug59|pig-W|Schizosaccharomyces pombe|chr
1|||Manual
Length = 459
Score = 26.6 bits (56), Expect = 2.5
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = -2
Query: 198 IEFTIFCSVPDMVLYTAVSVHKFLL 124
+EF IFC +P V+Y + V F L
Sbjct: 54 VEFFIFCLIPLFVIYVSSKVGVFTL 78
>SPAC824.09c |||GTPase activating protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 320
Score = 26.6 bits (56), Expect = 2.5
Identities = 14/64 (21%), Positives = 32/64 (50%)
Frame = +2
Query: 167 SGTEQNIVNSMQQLSVTQTSIGSTEKPTQVVTPAVNRSQPSAKVTPVKASTVSPAIATID 346
S T + Q + T +S + + + T V +QPSA+ +PV++++ P +
Sbjct: 251 STTSSQPYGAFHQPATTGSSFVADKWKMPMFTSNVTSAQPSARASPVQSNSSRPRSSLDS 310
Query: 347 RLLS 358
++++
Sbjct: 311 KIIN 314
>SPBC244.01c |sid4||SIN component scaffold protein Sid4
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 660
Score = 26.6 bits (56), Expect = 2.5
Identities = 18/59 (30%), Positives = 25/59 (42%)
Frame = +2
Query: 263 PAVNRSQPSAKVTPVKASTVSPAIATIDRLLSLGANIPPPPPVITRTSDMDPHTVEQLR 439
P+ N + S TP K V+P + + +N P PP + TS D QLR
Sbjct: 124 PSFNSEKASYTSTPYK--NVAPKVIDSPSARHMHSNSPSFPPSQSHTSSYDQSPKGQLR 180
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 23.0 bits (47), Expect(2) = 2.7
Identities = 12/41 (29%), Positives = 19/41 (46%)
Frame = +2
Query: 266 AVNRSQPSAKVTPVKASTVSPAIATIDRLLSLGANIPPPPP 388
A N+ +P P + + P I S +++PPPPP
Sbjct: 305 AANKKRPPPPPPPSRRNRGKPPIGNG----SSNSSLPPPPP 341
Score = 21.8 bits (44), Expect(2) = 2.7
Identities = 9/24 (37%), Positives = 12/24 (50%)
Frame = +2
Query: 374 PPPPPVITRTSDMDPHTVEQLRAV 445
PPPPP ++ P + RAV
Sbjct: 362 PPPPPRSAPSTGRQPPPLSSSRAV 385
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 26.2 bits (55), Expect = 3.3
Identities = 26/80 (32%), Positives = 34/80 (42%), Gaps = 6/80 (7%)
Frame = +2
Query: 242 KPTQVVTPAVNRSQPSAKVTPVKAST---VSP---AIATIDRLLSLGANIPPPPPVITRT 403
KP Q TP+ SA TPV A T + P A A + ++ A+I PP V+
Sbjct: 1251 KPRQKGTPSPAPVN-SATSTPVAAPTAQQIQPGKQASAVSSNVPAVSASISTPPAVVPTV 1309
Query: 404 SDMDPHTVEQLRAVKELLTT 463
P AVK+ TT
Sbjct: 1310 QHPQPTKQIPTAAVKDPSTT 1329
>SPAC1805.05 |cki3||serine/threonine protein kinase
Cki3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 439
Score = 26.2 bits (55), Expect = 3.3
Identities = 22/82 (26%), Positives = 39/82 (47%), Gaps = 3/82 (3%)
Frame = +2
Query: 95 RDHVNYLSNNSKNL*TDTAVYSTMSGTEQNIVN---SMQQLSVTQTSIGSTEKPTQVVTP 265
R N LS+ SK + V ++++ + I S Q QTS ++P +V P
Sbjct: 338 RTRQNLLSSPSKQTPVNNVVDASVATQKDGIPGKAASPQVQQQQQTSSAQQQQPQRVEQP 397
Query: 266 AVNRSQPSAKVTPVKASTVSPA 331
A +QP+ +V +A+ +P+
Sbjct: 398 APQTTQPT-QVDTQQAAKPAPS 418
>SPAC1B3.07c |vps28||ESCRT I complex subunit
Vps28|Schizosaccharomyces pombe|chr 1|||Manual
Length = 248
Score = 26.2 bits (55), Expect = 3.3
Identities = 14/48 (29%), Positives = 20/48 (41%)
Frame = +2
Query: 209 SVTQTSIGSTEKPTQVVTPAVNRSQPSAKVTPVKASTVSPAIATIDRL 352
+ + SI + Q V P S PSA + A V I T+D +
Sbjct: 124 TTAEPSIAMNDTTPQTVNPTKAPSNPSASIAKSIAGLVQNFITTLDAI 171
>SPAC212.11 |tlh1||RecQ type DNA helicase|Schizosaccharomyces
pombe|chr 1||Partial|Manual
Length = 1887
Score = 26.2 bits (55), Expect = 3.3
Identities = 13/31 (41%), Positives = 16/31 (51%)
Frame = +2
Query: 296 VTPVKASTVSPAIATIDRLLSLGANIPPPPP 388
V P T PAIAT R + ++ PPP P
Sbjct: 1595 VKPTLPETPKPAIATHSRYNASFSSSPPPQP 1625
>SPBCPT2R1.08c |tlh2||RecQ type DNA helicase Tlh1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1919
Score = 26.2 bits (55), Expect = 3.3
Identities = 13/31 (41%), Positives = 16/31 (51%)
Frame = +2
Query: 296 VTPVKASTVSPAIATIDRLLSLGANIPPPPP 388
V P T PAIAT R + ++ PPP P
Sbjct: 1595 VKPTLPETPKPAIATHSRYNASFSSSPPPQP 1625
>SPBC646.14c |orc5||origin recognition complex subunit
Orc5|Schizosaccharomyces pombe|chr 2|||Manual
Length = 455
Score = 25.8 bits (54), Expect = 4.4
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = -2
Query: 201 CIEFTIFCSVPDMVLYTAVSVHKFLLL 121
C+ F C VP +VLY S K LL
Sbjct: 26 CLLFNKDCRVPSIVLYGVASTAKTFLL 52
>SPBC36B7.03 |sec63||ER protein translocation subcomplex subunit
Sec63 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 611
Score = 25.8 bits (54), Expect = 4.4
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = +2
Query: 32 IFVVVNSYCVSSVRSGSRTLQRDHVN 109
+F +V Y V GSRT RDHV+
Sbjct: 202 VFGIVLPYAVGKWWYGSRTYTRDHVH 227
>SPAC3G6.09c |tps2||trehalose-phosphate synthase Tps2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 849
Score = 25.8 bits (54), Expect = 4.4
Identities = 16/52 (30%), Positives = 26/52 (50%)
Frame = +2
Query: 41 VVNSYCVSSVRSGSRTLQRDHVNYLSNNSKNL*TDTAVYSTMSGTEQNIVNS 196
V N CVSSVR T+ ++V N +L + S SGT + ++++
Sbjct: 446 VANIACVSSVRDSMNTMALEYVACQQKNKGSL-----ILSEFSGTAELLLSA 492
>SPAC30.01c |sec72|sec7b|Sec7 domain|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1822
Score = 25.8 bits (54), Expect = 4.4
Identities = 16/71 (22%), Positives = 35/71 (49%), Gaps = 4/71 (5%)
Frame = +2
Query: 146 TAVYSTM--SGTEQNIVNSM--QQLSVTQTSIGSTEKPTQVVTPAVNRSQPSAKVTPVKA 313
T VY + S T+ N +++ + SVT+ + ++P + +T S ++ + VK
Sbjct: 312 TVVYERLRASHTQSNSTSALPEEDASVTENWVHDEDEPDKKITLHSMASAGTSSLDHVKV 371
Query: 314 STVSPAIATID 346
PA+ +++
Sbjct: 372 DADDPAVTSVE 382
>SPAC17H9.02 |||ATP-dependent RNA helicase Mtr4-like
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1030
Score = 25.4 bits (53), Expect = 5.8
Identities = 22/127 (17%), Positives = 54/127 (42%), Gaps = 1/127 (0%)
Frame = +2
Query: 77 GSRTLQRDHVNYLSNNSKNL*TDTAVYSTMSGTEQNIVNSMQQLSVTQTSIGSTEKPTQV 256
GSR D + L +++ + + +S + E++I+ ++ SV + ++ K +
Sbjct: 16 GSRESSNDELKVLLRDTETKEDEKSSFS--NSEEESIIENLSDSSVNKEYAKNSLKLSDA 73
Query: 257 VTPAVNRSQPSAKVTPVKASTVSPAIATIDR-LLSLGANIPPPPPVITRTSDMDPHTVEQ 433
V+ + + ++ + + D + L +IP PP T ++DP
Sbjct: 74 VSESKYLNPLLKDKRHDRSFALHKVVVPDDYDYIPLNKHIPSDPPAKTYPFELDPFQSTA 133
Query: 434 LRAVKEL 454
++ V+ +
Sbjct: 134 IKCVERM 140
>SPAC30D11.14c |||RNA-binding protein |Schizosaccharomyces pombe|chr
1|||Manual
Length = 534
Score = 25.4 bits (53), Expect = 5.8
Identities = 15/52 (28%), Positives = 26/52 (50%)
Frame = +2
Query: 179 QNIVNSMQQLSVTQTSIGSTEKPTQVVTPAVNRSQPSAKVTPVKASTVSPAI 334
+ I S+Q S TS ++ ++ +T + S PSA P+ S+ PA+
Sbjct: 97 RRIAESLQ--STKATSSRTSYDHSEGITSTTSASPPSAPAPPLPPSSEGPAV 146
>SPBC29A3.16 |||ribosome biogenesis protein Rrs1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 166
Score = 25.0 bits (52), Expect = 7.7
Identities = 16/54 (29%), Positives = 27/54 (50%)
Frame = +2
Query: 143 DTAVYSTMSGTEQNIVNSMQQLSVTQTSIGSTEKPTQVVTPAVNRSQPSAKVTP 304
++ ++S Q +VN M L +TS G + + VTP + R++P K P
Sbjct: 37 ESFLFSLSRDNVQQLVNKMISLPKERTSDGVLLQLPETVTP-LPRAKPLPKPKP 89
>SPBC1289.15 ||SPBC8E4.07c|glycoprotein |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1283
Score = 25.0 bits (52), Expect = 7.7
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +2
Query: 140 TDTAVYSTMSGTEQNIVNSMQQLSVTQTSIGSTE 241
T+T S +GT N ++ L +T T G+TE
Sbjct: 114 TNTTQVSLTNGTTTNSYSNTNSLPITDTINGTTE 147
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,893,508
Number of Sequences: 5004
Number of extensions: 34043
Number of successful extensions: 199
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 159
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 193
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 238029836
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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