SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP13_F_G19
         (455 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_08_0310 - 16669565-16669822,16670558-16670794                      143   7e-35
03_01_0290 + 2246791-2247027,2248089-2248346                          143   7e-35
04_04_0823 + 28383798-28383864,28384475-28384877,28387388-283879...    31   0.33 
09_06_0235 - 21763470-21764511,21767865-21768261,21768625-217686...    30   1.0  
02_04_0007 - 18858587-18859529,18860434-18860830,18861674-18861812     30   1.0  
01_06_0304 + 28340976-28342512,28342774-28342799,28343268-28343999     29   1.3  
08_01_0283 - 2304024-2304111,2304224-2304343,2304594-2304715,230...    29   1.8  
09_04_0688 + 19475847-19477034,19477133-19477384,19477778-194778...    29   2.3  
01_01_0167 + 1422344-1424260,1424338-1424472,1424568-1424990,142...    29   2.3  
05_03_0549 - 15349259-15349346,15349466-15349585,15349899-153500...    28   3.1  
03_05_0435 - 24259864-24260206,24260302-24260467,24261175-242612...    28   3.1  
03_02_0263 - 6948618-6948818,6948909-6948971,6949078-6949146,694...    28   3.1  
02_01_0391 + 2838471-2838794,2838892-2839028,2841155-2841631,284...    28   3.1  
01_01_0990 + 7847066-7847478,7847713-7848679                           28   3.1  
06_03_0588 + 22567820-22570802,22570917-22571269                       28   4.1  
02_05_0026 + 25168944-25168991,25169114-25169179,25169414-25169599     28   4.1  
01_01_0667 + 5099026-5099188,5099262-5099661,5099748-5100648           28   4.1  
07_01_0174 - 1227871-1228043,1228303-1228423,1228519-1228588,122...    27   5.4  
03_06_0140 + 31951569-31951710,31951943-31952037,31952141-319539...    27   5.4  
01_06_1794 - 39919363-39920025                                         27   5.4  
10_05_0007 + 7759814-7760063,7760367-7760507,7760580-7761007           27   7.2  
09_01_0142 - 2103224-2103864,2104264-2104399                           27   7.2  
06_03_0846 - 25328224-25330613,25330716-25330794                       27   7.2  
06_01_0056 - 478424-478491,478587-478821,478916-478978,479102-47...    27   7.2  
04_01_0589 + 7704262-7704429,7704718-7705540,7705844-7706484           27   7.2  
03_02_0027 + 5100865-5100878,5102241-5102708,5102795-5103021,510...    27   7.2  
11_06_0195 - 21138029-21138389,21139796-21140052                       27   9.5  
09_06_0204 - 21559024-21559287,21559445-21559567,21559665-215597...    27   9.5  
08_02_0830 - 21617485-21618198                                         27   9.5  
06_01_0085 - 678144-678335,678466-678639,678721-678912,679756-67...    27   9.5  
02_05_0157 - 26353971-26354336,26354645-26354726,26354838-263549...    27   9.5  

>10_08_0310 - 16669565-16669822,16670558-16670794
          Length = 164

 Score =  143 bits (346), Expect = 7e-35
 Identities = 63/114 (55%), Positives = 88/114 (77%)
 Frame = +3

Query: 102 GTIPLSTYMKVYKVGDIVDIRGNGAVQKGMPHKVYHGKTGRVYNVTAHALGVIVNKRVRG 281
           G IPL+TY++ YK+G+ VD++ NGAV KGMPHK YHG+TGRV+NVT  A+GV +NK+V  
Sbjct: 23  GYIPLTTYLRTYKIGEHVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKRAIGVEINKQVGN 82

Query: 282 RIIPKRINIRVEHVKHSKCRQDFLKRVKENERLLKEAXAAGKTVNLKRQPAPPK 443
           RII KRI++RVEHV+ S+C ++F  R  +N++L  +A A G+ ++ KRQP  PK
Sbjct: 83  RIIRKRIHVRVEHVQPSRCTEEFRLRKIKNDQLKADAKARGEVISTKRQPQGPK 136


>03_01_0290 + 2246791-2247027,2248089-2248346
          Length = 164

 Score =  143 bits (346), Expect = 7e-35
 Identities = 63/114 (55%), Positives = 87/114 (76%)
 Frame = +3

Query: 102 GTIPLSTYMKVYKVGDIVDIRGNGAVQKGMPHKVYHGKTGRVYNVTAHALGVIVNKRVRG 281
           G IPL+TY++ YK+GD VD++ NGAV KGMPHK YHG+TGRV+NVT  A+GV +NK+V  
Sbjct: 23  GYIPLTTYLRTYKIGDYVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKRAIGVEINKQVGN 82

Query: 282 RIIPKRINIRVEHVKHSKCRQDFLKRVKENERLLKEAXAAGKTVNLKRQPAPPK 443
           RII KRI++RVEHV+ S+C ++   R  +N++L  +A A G+ ++ KRQP  PK
Sbjct: 83  RIIRKRIHVRVEHVQPSRCTEELRLRKIKNDQLKADAKARGEVISTKRQPEGPK 136


>04_04_0823 +
           28383798-28383864,28384475-28384877,28387388-28387932,
           28387978-28388594
          Length = 543

 Score = 31.5 bits (68), Expect = 0.33
 Identities = 26/69 (37%), Positives = 34/69 (49%), Gaps = 5/69 (7%)
 Frame = +2

Query: 161 QRQW-CS--SKGYATQSIPWKDRSRVQRDCSCS--RCDCQQACSRKDYTEAHQYPC*ACQ 325
           +++W C   SK YA QS  WK  S++   C     RCDC    SR+D    H+  C A  
Sbjct: 117 EKKWKCDKCSKRYAVQS-DWKAHSKI---CGTREYRCDCGTLFSRRDSFITHRAFCDA-- 170

Query: 326 ALQVQTRLP 352
             Q  +RLP
Sbjct: 171 LAQESSRLP 179


>09_06_0235 -
           21763470-21764511,21767865-21768261,21768625-21768632,
           21769489-21769565
          Length = 507

 Score = 29.9 bits (64), Expect = 1.0
 Identities = 27/75 (36%), Positives = 35/75 (46%), Gaps = 7/75 (9%)
 Frame = +2

Query: 149 HCRH--QRQW-CS--SKGYATQSIPWKDRSRVQRDCSCS--RCDCQQACSRKDYTEAHQY 307
           +CR   +++W C   SK YA QS  WK  S+    C     RCDC    SR+D    H+ 
Sbjct: 115 YCRKHGEKKWRCDKCSKRYAVQS-DWKAHSKT---CGTREYRCDCGTLFSRRDSFITHRA 170

Query: 308 PC*ACQALQVQTRLP 352
            C A    Q   R+P
Sbjct: 171 FCDA--LAQENARMP 183


>02_04_0007 - 18858587-18859529,18860434-18860830,18861674-18861812
          Length = 492

 Score = 29.9 bits (64), Expect = 1.0
 Identities = 21/56 (37%), Positives = 28/56 (50%), Gaps = 5/56 (8%)
 Frame = +2

Query: 161 QRQW-CS--SKGYATQSIPWKDRSRVQRDCSCS--RCDCQQACSRKDYTEAHQYPC 313
           +++W C   SK YA QS  WK  +++   C     RCDC    SRKD    H+  C
Sbjct: 139 EKKWKCDRCSKKYAVQS-DWKAHTKI---CGTKEYRCDCGTIFSRKDSFITHRAFC 190


>01_06_0304 + 28340976-28342512,28342774-28342799,28343268-28343999
          Length = 764

 Score = 29.5 bits (63), Expect = 1.3
 Identities = 19/70 (27%), Positives = 25/70 (35%), Gaps = 6/70 (8%)
 Frame = +2

Query: 116 LHVHESVQSWRHCRHQRQWCSSKGYAT------QSIPWKDRSRVQRDCSCSRCDCQQACS 277
           LH H+     R C+  R   S     T           K    ++  CSCS+ D   +CS
Sbjct: 232 LHTHQVTDENRQCKSARGMLSHLDNYTGLNSDHAGKKLKGHLSIEEPCSCSKDDTDSSCS 291

Query: 278 RKDYTEAHQY 307
             D   A  Y
Sbjct: 292 LADEHHARHY 301


>08_01_0283 -
           2304024-2304111,2304224-2304343,2304594-2304715,
           2304824-2305096,2305454-2305558,2305635-2305851,
           2306012-2306262,2306518-2306724,2307087-2307351,
           2308655-2308749
          Length = 580

 Score = 29.1 bits (62), Expect = 1.8
 Identities = 13/34 (38%), Positives = 16/34 (47%)
 Frame = +2

Query: 143 WRHCRHQRQWCSSKGYATQSIPWKDRSRVQRDCS 244
           W    H  QW     YAT+ I W+ R+ V  D S
Sbjct: 535 WISIGHSTQWLWYSVYATKQISWRTRALVISDWS 568


>09_04_0688 +
           19475847-19477034,19477133-19477384,19477778-19477858,
           19477907-19478072,19479009-19479445,19479781-19479837
          Length = 726

 Score = 28.7 bits (61), Expect = 2.3
 Identities = 14/81 (17%), Positives = 38/81 (46%), Gaps = 1/81 (1%)
 Frame = -1

Query: 320 MLNTDIDALRYNPSANTLVDNHTESMSSHVVHATCLSMVYFVWHTLLN-CTIASDVYNVS 144
           ++  ++ AL ++      +  + ++ +SH++HA  + ++Y +   L++ C       N +
Sbjct: 512 VVTANVSALSWSSYDGIFIIAYMDNAASHLIHAGHIDVLYTIHELLISGCKGCRPGQNCN 571

Query: 143 NFVHFHVRGERNSSMCAGTCE 81
                   G +N + C+  C+
Sbjct: 572 LIDDSEKGGRKNMTCCSMECD 592


>01_01_0167 +
           1422344-1424260,1424338-1424472,1424568-1424990,
           1425183-1425252,1425356-1425495,1425620-1425679,
           1425776-1425931,1426272-1426541
          Length = 1056

 Score = 28.7 bits (61), Expect = 2.3
 Identities = 11/24 (45%), Positives = 18/24 (75%)
 Frame = +3

Query: 135 YKVGDIVDIRGNGAVQKGMPHKVY 206
           ++ GDI+ I G+G+V K  PH++Y
Sbjct: 623 FEDGDIIVIWGDGSVSKVGPHEIY 646


>05_03_0549 -
           15349259-15349346,15349466-15349585,15349899-15350020,
           15350511-15350783,15351398-15351502,15351588-15351804,
           15352031-15352281,15352582-15352776,15352881-15353139,
           15354617-15354714
          Length = 575

 Score = 28.3 bits (60), Expect = 3.1
 Identities = 11/32 (34%), Positives = 14/32 (43%)
 Frame = +2

Query: 143 WRHCRHQRQWCSSKGYATQSIPWKDRSRVQRD 238
           W H  H  QW     YA++   W+ R  V  D
Sbjct: 530 WIHVGHSTQWLWYSVYASKQFSWRTRMLVVSD 561


>03_05_0435 -
           24259864-24260206,24260302-24260467,24261175-24261241,
           24261553-24261648,24261718-24261898,24262252-24262323,
           24262393-24262505,24262596-24262817,24263262-24263910,
           24264118-24264206,24265932-24266015,24266219-24266358,
           24266522-24266573
          Length = 757

 Score = 28.3 bits (60), Expect = 3.1
 Identities = 15/42 (35%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
 Frame = +2

Query: 176 SSKGYATQSIPWKDRSRVQRDC--SCSRCDCQQACSRKDYTE 295
           +S G + Q  P + R + Q D   SC RC C+++   K Y E
Sbjct: 436 TSAGNSGQENPKRKRQKCQNDNVDSCKRCSCKKSKCLKLYCE 477


>03_02_0263 -
           6948618-6948818,6948909-6948971,6949078-6949146,
           6949232-6949297,6949380-6949526,6949608-6949702,
           6949845-6950016,6952187-6952318,6953581-6953674,
           6954067-6954184,6955884-6957057
          Length = 776

 Score = 28.3 bits (60), Expect = 3.1
 Identities = 11/28 (39%), Positives = 13/28 (46%)
 Frame = +2

Query: 230 QRDCSCSRCDCQQACSRKDYTEAHQYPC 313
           Q  C C  C C  +  RKD   A +Y C
Sbjct: 391 QDTCGCMMCKCIYSDQRKDIVLADKYTC 418


>02_01_0391 +
           2838471-2838794,2838892-2839028,2841155-2841631,
           2841719-2841999,2843009-2843051,2844094-2844148,
           2845771-2845824,2846282-2846314,2846574-2846621,
           2846885-2846950,2847286-2847426
          Length = 552

 Score = 28.3 bits (60), Expect = 3.1
 Identities = 17/65 (26%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
 Frame = -1

Query: 332 GVLDMLNTDIDAL-RYNPSANTLVDNHTESMSSHVVHATCLSMVYFVWHTLLNCTIASDV 156
           GV+++  ++ +A  RYN +A+ L +  TES+ S  +   C++    +   + + T     
Sbjct: 239 GVIEIPYSEEEACCRYNETASILKELITESVGSEAIGVDCIADFRRLLRQMESMTSVCQE 298

Query: 155 YNVSN 141
           Y +SN
Sbjct: 299 YIISN 303


>01_01_0990 + 7847066-7847478,7847713-7848679
          Length = 459

 Score = 28.3 bits (60), Expect = 3.1
 Identities = 21/56 (37%), Positives = 27/56 (48%), Gaps = 5/56 (8%)
 Frame = +2

Query: 161 QRQW-CS--SKGYATQSIPWKDRSRVQRDCSCS--RCDCQQACSRKDYTEAHQYPC 313
           +++W C   SK YA QS  WK  S+    C     RCDC    SR+D    H+  C
Sbjct: 98  EKKWKCDKCSKRYAVQS-DWKAHSKT---CGTREYRCDCGTLFSRRDSFITHRAFC 149


>06_03_0588 + 22567820-22570802,22570917-22571269
          Length = 1111

 Score = 27.9 bits (59), Expect = 4.1
 Identities = 14/44 (31%), Positives = 27/44 (61%)
 Frame = +3

Query: 72  TCSLAGSXTHGTIPLSTYMKVYKVGDIVDIRGNGAVQKGMPHKV 203
           T +LA +  HGTIP+  + K++ + + +D+  N  +  G+P +V
Sbjct: 565 TLNLAHNSLHGTIPVHIF-KIFSLSEHLDLSHN-YLSGGIPQEV 606


>02_05_0026 + 25168944-25168991,25169114-25169179,25169414-25169599
          Length = 99

 Score = 27.9 bits (59), Expect = 4.1
 Identities = 13/36 (36%), Positives = 24/36 (66%)
 Frame = +3

Query: 321 VKHSKCRQDFLKRVKENERLLKEAXAAGKTVNLKRQ 428
           ++ +KCRQD++  VK++ +L+++  A  K    KRQ
Sbjct: 1   MRQAKCRQDYMAIVKQSRQLIEKLDA--KNEPKKRQ 34


>01_01_0667 + 5099026-5099188,5099262-5099661,5099748-5100648
          Length = 487

 Score = 27.9 bits (59), Expect = 4.1
 Identities = 21/56 (37%), Positives = 27/56 (48%), Gaps = 5/56 (8%)
 Frame = +2

Query: 161 QRQW-CS--SKGYATQSIPWKDRSRVQRDCSCS--RCDCQQACSRKDYTEAHQYPC 313
           +++W C   SK YA  S  WK  S+V   C     RCDC    SR+D    H+  C
Sbjct: 148 EKKWKCDKCSKRYAVHS-DWKAHSKV---CGTREYRCDCGTLFSRRDSFITHRAFC 199


>07_01_0174 -
           1227871-1228043,1228303-1228423,1228519-1228588,
           1228877-1228953,1229215-1229393,1229558-1229684,
           1229849-1229861,1230351-1230378,1230426-1230516,
           1230870-1230956,1231239-1231276,1231426-1231464,
           1231553-1231699,1231899-1231958,1232033-1232111,
           1232429-1232517,1232906-1232967,1233238-1233427,
           1233929-1234068,1235813-1236147,1237086-1237133
          Length = 730

 Score = 27.5 bits (58), Expect = 5.4
 Identities = 17/51 (33%), Positives = 24/51 (47%)
 Frame = +3

Query: 186 GMPHKVYHGKTGRVYNVTAHALGVIVNKRVRGRIIPKRINIRVEHVKHSKC 338
           G P     G T  VY+V AH+ GVIV+          +  I V+ ++H  C
Sbjct: 137 GQPLLEMIGHTSLVYSVDAHSSGVIVSGSEDRSAKIWKDGICVQSIEHPGC 187


>03_06_0140 +
           31951569-31951710,31951943-31952037,31952141-31953982,
           31954065-31954179,31954260-31954897
          Length = 943

 Score = 27.5 bits (58), Expect = 5.4
 Identities = 11/29 (37%), Positives = 21/29 (72%)
 Frame = +1

Query: 286 LYRSASISVLSMSSTPSADKTSLRESKRM 372
           +Y+SA++ V + SS P+ADK + +  ++M
Sbjct: 410 VYKSANLQVSNSSSIPAADKQTRQTMRQM 438


>01_06_1794 - 39919363-39920025
          Length = 220

 Score = 27.5 bits (58), Expect = 5.4
 Identities = 12/28 (42%), Positives = 17/28 (60%)
 Frame = +3

Query: 357 RVKENERLLKEAXAAGKTVNLKRQPAPP 440
           R ++ ++   EA AAG   + KRQP PP
Sbjct: 27  RQQQQQQQQYEAAAAGDKTSAKRQPPPP 54


>10_05_0007 + 7759814-7760063,7760367-7760507,7760580-7761007
          Length = 272

 Score = 27.1 bits (57), Expect = 7.2
 Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
 Frame = +3

Query: 216 TGRVYNVTAHALGVIVNKRVRGRIIPKRINIRVEHVKH--SKCRQD 347
           T R  NV      +IV   VRGRI+P  I   ++H +    +C+++
Sbjct: 138 TNRHLNVQPPPQRIIVKGTVRGRIVPPAIVSSLQHQRQQGKQCQEN 183


>09_01_0142 - 2103224-2103864,2104264-2104399
          Length = 258

 Score = 27.1 bits (57), Expect = 7.2
 Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
 Frame = +3

Query: 216 TGRVYNVTAHALGVIVNKRVRGRIIPKRINIRVEHVKH--SKCRQD 347
           T R  NV      +IV   VRGRI+P  I   ++H +    +C+++
Sbjct: 124 TNRHLNVQPPPQRIIVKGTVRGRIVPPAIVSSLQHQRQQGKQCQEN 169


>06_03_0846 - 25328224-25330613,25330716-25330794
          Length = 822

 Score = 27.1 bits (57), Expect = 7.2
 Identities = 11/34 (32%), Positives = 22/34 (64%)
 Frame = +3

Query: 213 KTGRVYNVTAHALGVIVNKRVRGRIIPKRINIRV 314
           +TG  ++V A+   V+  +R  GR++  R+N+R+
Sbjct: 158 RTGE-FDVRANVYAVVAKRRDGGRLVLPRLNLRI 190


>06_01_0056 -
           478424-478491,478587-478821,478916-478978,479102-479179,
           479263-479354,479788-479866,479971-480104,480184-480523
          Length = 362

 Score = 27.1 bits (57), Expect = 7.2
 Identities = 22/87 (25%), Positives = 36/87 (41%), Gaps = 8/87 (9%)
 Frame = +3

Query: 18  HNGSKMTNSKGYXPRHQGTCSLAGSXTHGTIPLSTYMKV--------YKVGDIVDIRGNG 173
           H+   +TN       + G C L    T    P  T+  V        Y+ G  + +  +G
Sbjct: 71  HDEGVVTNKYRPKEPYVGKCLLNTKITADDAPGETWHMVFSTEGEIPYREGQSIGVIADG 130

Query: 174 AVQKGMPHKVYHGKTGRVYNVTAHALG 254
             + G PHK+      R+Y++ + ALG
Sbjct: 131 VDKNGKPHKL------RLYSIASSALG 151


>04_01_0589 + 7704262-7704429,7704718-7705540,7705844-7706484
          Length = 543

 Score = 27.1 bits (57), Expect = 7.2
 Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
 Frame = +3

Query: 216 TGRVYNVTAHALGVIVNKRVRGRIIPKRINIRVEHVKH--SKCRQD 347
           T R  NV      +IV   VRGRI+P  I   ++H +    +C+++
Sbjct: 409 TNRHLNVQPPPQRIIVKGTVRGRIVPPAIVSSLQHQRQQGKQCQEN 454


>03_02_0027 +
           5100865-5100878,5102241-5102708,5102795-5103021,
           5103670-5104577
          Length = 538

 Score = 27.1 bits (57), Expect = 7.2
 Identities = 19/54 (35%), Positives = 26/54 (48%), Gaps = 3/54 (5%)
 Frame = +2

Query: 161 QRQW-CS--SKGYATQSIPWKDRSRVQRDCSCSRCDCQQACSRKDYTEAHQYPC 313
           +++W C   SK YA QS  WK  ++        RCDC    SR+D    H+  C
Sbjct: 121 EKKWKCDKCSKKYAVQS-DWKAHTKTCGSREY-RCDCGTLFSRRDSFITHRAFC 172


>11_06_0195 - 21138029-21138389,21139796-21140052
          Length = 205

 Score = 26.6 bits (56), Expect = 9.5
 Identities = 14/36 (38%), Positives = 18/36 (50%)
 Frame = +2

Query: 146 RHCRHQRQWCSSKGYATQSIPWKDRSRVQRDCSCSR 253
           RH R  R  CS K ++   +PW     +Q DC C R
Sbjct: 161 RHQRVTRLPCSHKYHSECVLPW---LAIQPDCPCCR 193


>09_06_0204 - 21559024-21559287,21559445-21559567,21559665-21559718,
            21559800-21560721,21560803-21561212,21561284-21561408,
            21561524-21561571,21561668-21561789,21562008-21562099,
            21562242-21562429,21562582-21562696,21562780-21562863,
            21562994-21563087,21563393-21563510,21563805-21563930,
            21564002-21564074,21564209-21564296,21564674-21564744,
            21564839-21564918,21565004-21565065,21565169-21565310,
            21565410-21565510,21565600-21565644,21565725-21565789,
            21566088-21566163,21566246-21566300,21566416-21566773
          Length = 1366

 Score = 26.6 bits (56), Expect = 9.5
 Identities = 11/34 (32%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
 Frame = +2

Query: 176  SSKGYATQSIPWKDRSR-VQRDCSCSRCDCQQAC 274
            S++G A  S  W ++   V +  +C  C C+ AC
Sbjct: 1166 SNEGSAHNSSFWSEKDGCVYKPVTCQTCSCKNAC 1199


>08_02_0830 - 21617485-21618198
          Length = 237

 Score = 26.6 bits (56), Expect = 9.5
 Identities = 14/40 (35%), Positives = 23/40 (57%)
 Frame = +3

Query: 330 SKCRQDFLKRVKENERLLKEAXAAGKTVNLKRQPAPPKAA 449
           S CR D ++R   N+R L  A +A +  ++ ++P P K A
Sbjct: 149 SPCRADSVERWDSNKRPLSRASSAERW-DINKKPRPKKDA 187


>06_01_0085 -
           678144-678335,678466-678639,678721-678912,679756-679911,
           680091-680158,680878-681127
          Length = 343

 Score = 26.6 bits (56), Expect = 9.5
 Identities = 11/24 (45%), Positives = 13/24 (54%)
 Frame = -1

Query: 161 DVYNVSNFVHFHVRGERNSSMCAG 90
           DV+ VS  VH+   G  N SM  G
Sbjct: 118 DVFTVSGIVHYGTAGSSNDSMSFG 141


>02_05_0157 -
           26353971-26354336,26354645-26354726,26354838-26354933,
           26355365-26356068
          Length = 415

 Score = 26.6 bits (56), Expect = 9.5
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +2

Query: 137 QSWRHCRHQRQWCSSKG 187
           QSW +C    +WC +KG
Sbjct: 255 QSWGNCVSVEEWCKNKG 271


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,696,686
Number of Sequences: 37544
Number of extensions: 229644
Number of successful extensions: 764
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 757
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 764
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 895500300
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -