Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP13_F_G19
(455 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein. 26 0.55
AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein. 25 0.95
AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcript... 23 3.9
AJ130951-1|CAA10260.1| 189|Anopheles gambiae SG3 protein protein. 23 5.1
AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein. 23 6.7
AJ302655-1|CAC35520.1| 332|Anopheles gambiae gSG5 protein protein. 23 6.7
M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles ... 22 8.9
AY334004-1|AAR01129.1| 194|Anopheles gambiae integrin protein. 22 8.9
AY334003-1|AAR01128.1| 194|Anopheles gambiae integrin protein. 22 8.9
AY334002-1|AAR01127.1| 194|Anopheles gambiae integrin protein. 22 8.9
AY334001-1|AAR01126.1| 194|Anopheles gambiae integrin protein. 22 8.9
AF492464-1|AAM11657.1| 803|Anopheles gambiae beta nu integrin s... 22 8.9
AF469165-1|AAL68692.1| 226|Anopheles gambiae amylase protein. 22 8.9
AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcript... 22 8.9
>M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.
Length = 1212
Score = 26.2 bits (55), Expect = 0.55
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +3
Query: 339 RQDFLKRVKENERLLKEAXAAGKTVNLKRQPAPP 440
R++ +R +E +L EA A + N + QP PP
Sbjct: 1101 REEDERRTEERRQLHNEANRAYRQRNRRSQPTPP 1134
>AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.
Length = 1132
Score = 25.4 bits (53), Expect = 0.95
Identities = 32/132 (24%), Positives = 57/132 (43%), Gaps = 5/132 (3%)
Frame = +3
Query: 45 KGYXPRHQGTCSLAGSXTHGTIPLSTYMKVYKVG--DIVD---IRGNGAVQKGMPHKVYH 209
+GY + CSL P S ++ V K G D++D + GA P +
Sbjct: 233 RGYGGEAKVRCSLYQVDPQRRAPHSHHL-VIKSGELDLIDPHDLDVGGAAGAAEPSEGVG 291
Query: 210 GKTGRVYNVTAHALGVIVNKRVRGRIIPKRINIRVEHVKHSKCRQDFLKRVKENERLLKE 389
G G+ Y T +G+I + + I + + ++ KH C + +E +++ KE
Sbjct: 292 GD-GK-YVATFQGMGIIHTAK---KFIAEELYKKLR--KHRLCELNREPTEREEQQMQKE 344
Query: 390 AXAAGKTVNLKR 425
A +T+NL +
Sbjct: 345 AAVMARTMNLNQ 356
>AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcriptase
protein.
Length = 1022
Score = 23.4 bits (48), Expect = 3.9
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = -2
Query: 178 TAPLPLMSTMSPTLYTFMYVE 116
TA +P S + PTL+ MY E
Sbjct: 607 TAGVPQGSVLGPTLWNLMYNE 627
>AJ130951-1|CAA10260.1| 189|Anopheles gambiae SG3 protein protein.
Length = 189
Score = 23.0 bits (47), Expect = 5.1
Identities = 8/18 (44%), Positives = 13/18 (72%)
Frame = -2
Query: 238 VTLYTRPVFPWYTLCGIP 185
V ++ RP PW+++ GIP
Sbjct: 73 VGIFGRPGRPWWSVPGIP 90
>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
Length = 3398
Score = 22.6 bits (46), Expect = 6.7
Identities = 9/26 (34%), Positives = 15/26 (57%)
Frame = -1
Query: 302 DALRYNPSANTLVDNHTESMSSHVVH 225
DA+R + + +V NH E S+ +H
Sbjct: 3072 DAIRIGSNESIVVPNHMERSSASSLH 3097
>AJ302655-1|CAC35520.1| 332|Anopheles gambiae gSG5 protein protein.
Length = 332
Score = 22.6 bits (46), Expect = 6.7
Identities = 12/52 (23%), Positives = 24/52 (46%)
Frame = +3
Query: 225 VYNVTAHALGVIVNKRVRGRIIPKRINIRVEHVKHSKCRQDFLKRVKENERL 380
++ + H GV+V+ + R + EH++H R K + NE++
Sbjct: 117 LFQIGQHVRGVLVSIKSRMMAYTNDAVAKFEHLRHRTMRAVKRKMDELNEQI 168
>M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles
gambiae RT2 retroposon. ).
Length = 1222
Score = 22.2 bits (45), Expect = 8.9
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = -2
Query: 178 TAPLPLMSTMSPTLYTFMY 122
TA +P S + PTL+ MY
Sbjct: 683 TAGVPQGSILGPTLWNIMY 701
>AY334004-1|AAR01129.1| 194|Anopheles gambiae integrin protein.
Length = 194
Score = 22.2 bits (45), Expect = 8.9
Identities = 5/11 (45%), Positives = 8/11 (72%)
Frame = +2
Query: 239 CSCSRCDCQQA 271
C+C RC C ++
Sbjct: 42 CNCGRCSCDES 52
>AY334003-1|AAR01128.1| 194|Anopheles gambiae integrin protein.
Length = 194
Score = 22.2 bits (45), Expect = 8.9
Identities = 5/11 (45%), Positives = 8/11 (72%)
Frame = +2
Query: 239 CSCSRCDCQQA 271
C+C RC C ++
Sbjct: 42 CNCGRCSCDES 52
>AY334002-1|AAR01127.1| 194|Anopheles gambiae integrin protein.
Length = 194
Score = 22.2 bits (45), Expect = 8.9
Identities = 5/11 (45%), Positives = 8/11 (72%)
Frame = +2
Query: 239 CSCSRCDCQQA 271
C+C RC C ++
Sbjct: 42 CNCGRCSCDES 52
>AY334001-1|AAR01126.1| 194|Anopheles gambiae integrin protein.
Length = 194
Score = 22.2 bits (45), Expect = 8.9
Identities = 5/11 (45%), Positives = 8/11 (72%)
Frame = +2
Query: 239 CSCSRCDCQQA 271
C+C RC C ++
Sbjct: 42 CNCGRCSCDES 52
>AF492464-1|AAM11657.1| 803|Anopheles gambiae beta nu integrin
subunit AgBnu protein.
Length = 803
Score = 22.2 bits (45), Expect = 8.9
Identities = 5/11 (45%), Positives = 8/11 (72%)
Frame = +2
Query: 239 CSCSRCDCQQA 271
C+C RC C ++
Sbjct: 618 CNCGRCSCDES 628
>AF469165-1|AAL68692.1| 226|Anopheles gambiae amylase protein.
Length = 226
Score = 22.2 bits (45), Expect = 8.9
Identities = 7/13 (53%), Positives = 10/13 (76%)
Frame = -1
Query: 125 VRGERNSSMCAGT 87
+ GER+ +MC GT
Sbjct: 185 ISGERDGTMCTGT 197
>AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcriptase
protein.
Length = 1222
Score = 22.2 bits (45), Expect = 8.9
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = -2
Query: 178 TAPLPLMSTMSPTLYTFMY 122
TA +P S + PTL+ MY
Sbjct: 629 TAGVPQGSILGPTLWNIMY 647
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 449,150
Number of Sequences: 2352
Number of extensions: 9267
Number of successful extensions: 22
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 39119412
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -