Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP13_F_G19
(455 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L15188-7|AAA27951.1| 161|Caenorhabditis elegans Ribosomal prote... 162 1e-40
AC084197-45|AAK68589.4| 751|Caenorhabditis elegans Hypothetical... 30 0.69
Z92775-2|CAB07162.2| 382|Caenorhabditis elegans Hypothetical pr... 28 2.8
Z92775-1|CAB07161.2| 379|Caenorhabditis elegans Hypothetical pr... 28 2.8
Z81491-1|CAB04019.1| 181|Caenorhabditis elegans Hypothetical pr... 28 3.7
Z69791-3|CAA93662.1| 924|Caenorhabditis elegans Hypothetical pr... 28 3.7
Z69791-2|CAA93661.2| 919|Caenorhabditis elegans Hypothetical pr... 28 3.7
Z69791-1|CAA93660.1| 945|Caenorhabditis elegans Hypothetical pr... 28 3.7
Z48240-1|CAA88283.1| 312|Caenorhabditis elegans DIF-1 protein. 28 3.7
X76115-1|CAA53721.1| 312|Caenorhabditis elegans carrier protein... 28 3.7
U61949-5|AAB03153.2| 312|Caenorhabditis elegans Differentiation... 28 3.7
Z71177-9|CAA94868.2| 425|Caenorhabditis elegans Hypothetical pr... 27 4.9
Z71177-2|CAA94867.1| 425|Caenorhabditis elegans Hypothetical pr... 27 4.9
U64859-9|AAC69090.1| 378|Caenorhabditis elegans Activated in bl... 27 4.9
U64859-8|AAC69096.1| 378|Caenorhabditis elegans Prion-like-(q/n... 27 4.9
Z66519-13|CAI46547.1| 281|Caenorhabditis elegans Hypothetical p... 27 6.5
Z66519-12|CAA91376.2| 288|Caenorhabditis elegans Hypothetical p... 27 6.5
Z83244-6|CAD18877.1| 502|Caenorhabditis elegans Hypothetical pr... 27 8.6
Z83244-5|CAB54315.1| 568|Caenorhabditis elegans Hypothetical pr... 27 8.6
Z83244-4|CAB54314.1| 562|Caenorhabditis elegans Hypothetical pr... 27 8.6
U61946-10|AAC24388.1| 1827|Caenorhabditis elegans Hypothetical p... 27 8.6
AL117193-5|CAB54985.1| 335|Caenorhabditis elegans Hypothetical ... 27 8.6
AL117193-4|CAB54984.1| 335|Caenorhabditis elegans Hypothetical ... 27 8.6
AL117193-3|CAB54983.1| 335|Caenorhabditis elegans Hypothetical ... 27 8.6
AL117193-2|CAB54982.1| 335|Caenorhabditis elegans Hypothetical ... 27 8.6
AF016451-13|AAB66007.1| 445|Caenorhabditis elegans Activated in... 27 8.6
AF016451-5|AAB65995.1| 438|Caenorhabditis elegans Activated in ... 27 8.6
AF016451-4|AAB65996.1| 388|Caenorhabditis elegans Activated in ... 27 8.6
AF016451-3|AAB66001.1| 388|Caenorhabditis elegans Prion-like-(q... 27 8.6
>L15188-7|AAA27951.1| 161|Caenorhabditis elegans Ribosomal protein,
large subunitprotein 21 protein.
Length = 161
Score = 162 bits (393), Expect = 1e-40
Identities = 82/141 (58%), Positives = 96/141 (68%), Gaps = 1/141 (0%)
Frame = +3
Query: 33 MTNSKGYXPRHQGTCSLAGSXTHGTIPLSTYMKVYKVGDIVDIRGNGAVQKGMPHKVYHG 212
MTNSKG R HG LSTY YK GD+VDI+ NGA QKGMP K YHG
Sbjct: 1 MTNSKGLR-RGTRYMFARDFRKHGVEHLSTYYTQYKRGDLVDIKTNGAFQKGMPFKAYHG 59
Query: 213 KTGRVYNVTAHALGVIVNKRVRGRIIPKRINIRVEHVKHSKCRQDFLKRVKENERLLKEA 392
+TGR++NVT A+G+IVNKRVRG I+PKRINIR+EH+K SKCR DFL RVK N+ K A
Sbjct: 60 RTGRIFNVTRGAVGIIVNKRVRGNILPKRINIRIEHIKPSKCRTDFLNRVKSNDEKRKAA 119
Query: 393 XAAGKTV-NLKRQPAPPKAAH 452
+AG+ V LKR P P+ AH
Sbjct: 120 KSAGQPVPALKRLPVAPRGAH 140
>AC084197-45|AAK68589.4| 751|Caenorhabditis elegans Hypothetical
protein Y73B6BL.1 protein.
Length = 751
Score = 30.3 bits (65), Expect = 0.69
Identities = 16/46 (34%), Positives = 20/46 (43%)
Frame = +2
Query: 137 QSWRHCRHQRQWCSSKGYATQSIPWKDRSRVQRDCSCSRCDCQQAC 274
Q RHC Q C S Y W+ RSRV +C+ + Q C
Sbjct: 366 QPVRHCSEQDATCDSPFYWCDMKLWRCRSRVVYGGNCTGYEGTQIC 411
>Z92775-2|CAB07162.2| 382|Caenorhabditis elegans Hypothetical
protein C06H5.2 protein.
Length = 382
Score = 28.3 bits (60), Expect = 2.8
Identities = 18/52 (34%), Positives = 28/52 (53%)
Frame = -1
Query: 374 LILFDSLKEVLSALGVLDMLNTDIDALRYNPSANTLVDNHTESMSSHVVHAT 219
LILFD+LK VL ++GVL + I+ L A L +TE + + ++
Sbjct: 200 LILFDALKNVLQSVGVLTTKSVLINWLPSVQIAEILEHFNTEILEDLTIKSS 251
>Z92775-1|CAB07161.2| 379|Caenorhabditis elegans Hypothetical
protein C06H5.1 protein.
Length = 379
Score = 28.3 bits (60), Expect = 2.8
Identities = 18/52 (34%), Positives = 28/52 (53%)
Frame = -1
Query: 374 LILFDSLKEVLSALGVLDMLNTDIDALRYNPSANTLVDNHTESMSSHVVHAT 219
LILFD+LK VL ++GVL + I+ L A L +TE + + ++
Sbjct: 200 LILFDALKNVLQSVGVLTTKSVLINWLPSVQIAEILEHFNTEILEDLTIKSS 251
>Z81491-1|CAB04019.1| 181|Caenorhabditis elegans Hypothetical
protein D1086.1 protein.
Length = 181
Score = 27.9 bits (59), Expect = 3.7
Identities = 11/37 (29%), Positives = 21/37 (56%), Gaps = 2/37 (5%)
Frame = +2
Query: 194 TQSIPW--KDRSRVQRDCSCSRCDCQQACSRKDYTEA 298
T+ + W D+SR+ D C++ ++ C KD+ +A
Sbjct: 120 TECVQWYFSDKSRMSTDQKCAQFKAKKQCIEKDFGKA 156
>Z69791-3|CAA93662.1| 924|Caenorhabditis elegans Hypothetical
protein F39D8.1c protein.
Length = 924
Score = 27.9 bits (59), Expect = 3.7
Identities = 20/79 (25%), Positives = 33/79 (41%), Gaps = 1/79 (1%)
Frame = +3
Query: 36 TNSKGYXPRHQGTCSLAGSXTHGTIPLSTYMKVYKVGDIVDIRGN-GAVQKGMPHKVYHG 212
T S GY P + +AG T GT+ + + G ++ GN G + + V
Sbjct: 115 TQSGGYYPNNLNGGVVAGGATTGTVVIGGVTQQVTQGGQPNVGGNVGGQNQNVGGVVGDQ 174
Query: 213 KTGRVYNVTAHALGVIVNK 269
+ N +A GV+ N+
Sbjct: 175 NQNQYQNQNINAAGVVGNQ 193
>Z69791-2|CAA93661.2| 919|Caenorhabditis elegans Hypothetical
protein F39D8.1b protein.
Length = 919
Score = 27.9 bits (59), Expect = 3.7
Identities = 20/79 (25%), Positives = 33/79 (41%), Gaps = 1/79 (1%)
Frame = +3
Query: 36 TNSKGYXPRHQGTCSLAGSXTHGTIPLSTYMKVYKVGDIVDIRGN-GAVQKGMPHKVYHG 212
T S GY P + +AG T GT+ + + G ++ GN G + + V
Sbjct: 110 TQSGGYYPNNLNGGVVAGGATTGTVVIGGVTQQVTQGGQPNVGGNVGGQNQNVGGVVGDQ 169
Query: 213 KTGRVYNVTAHALGVIVNK 269
+ N +A GV+ N+
Sbjct: 170 NQNQYQNQNINAAGVVGNQ 188
>Z69791-1|CAA93660.1| 945|Caenorhabditis elegans Hypothetical
protein F39D8.1a protein.
Length = 945
Score = 27.9 bits (59), Expect = 3.7
Identities = 20/79 (25%), Positives = 33/79 (41%), Gaps = 1/79 (1%)
Frame = +3
Query: 36 TNSKGYXPRHQGTCSLAGSXTHGTIPLSTYMKVYKVGDIVDIRGN-GAVQKGMPHKVYHG 212
T S GY P + +AG T GT+ + + G ++ GN G + + V
Sbjct: 133 TQSGGYYPNNLNGGVVAGGATTGTVVIGGVTQQVTQGGQPNVGGNVGGQNQNVGGVVGDQ 192
Query: 213 KTGRVYNVTAHALGVIVNK 269
+ N +A GV+ N+
Sbjct: 193 NQNQYQNQNINAAGVVGNQ 211
>Z48240-1|CAA88283.1| 312|Caenorhabditis elegans DIF-1 protein.
Length = 312
Score = 27.9 bits (59), Expect = 3.7
Identities = 16/32 (50%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
Frame = +3
Query: 84 AGSXTHGTIPLSTYMKVYKVGDIVDI-RGNGA 176
AGS H PL K+YK G I I RG GA
Sbjct: 140 AGSGVHYDGPLDVVKKLYKQGGISSIYRGTGA 171
>X76115-1|CAA53721.1| 312|Caenorhabditis elegans carrier protein
(c1) protein.
Length = 312
Score = 27.9 bits (59), Expect = 3.7
Identities = 16/32 (50%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
Frame = +3
Query: 84 AGSXTHGTIPLSTYMKVYKVGDIVDI-RGNGA 176
AGS H PL K+YK G I I RG GA
Sbjct: 140 AGSGVHYDGPLDVVKKLYKQGGISSIYRGTGA 171
>U61949-5|AAB03153.2| 312|Caenorhabditis elegans Differentiation
abnormal protein 1 protein.
Length = 312
Score = 27.9 bits (59), Expect = 3.7
Identities = 16/32 (50%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
Frame = +3
Query: 84 AGSXTHGTIPLSTYMKVYKVGDIVDI-RGNGA 176
AGS H PL K+YK G I I RG GA
Sbjct: 140 AGSGVHYDGPLDVVKKLYKQGGISSIYRGTGA 171
>Z71177-9|CAA94868.2| 425|Caenorhabditis elegans Hypothetical
protein AC3.4 protein.
Length = 425
Score = 27.5 bits (58), Expect = 4.9
Identities = 12/33 (36%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Frame = +2
Query: 230 QRDCSCS-RCDCQQACSRKDYTEAHQYPC*ACQ 325
++ C C+ R +C R YT+ QY C +CQ
Sbjct: 26 RQSCGCAPRVQPSCSCQRTTYTQPQQYSC-SCQ 57
>Z71177-2|CAA94867.1| 425|Caenorhabditis elegans Hypothetical
protein AC3.3 protein.
Length = 425
Score = 27.5 bits (58), Expect = 4.9
Identities = 12/33 (36%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Frame = +2
Query: 230 QRDCSCS-RCDCQQACSRKDYTEAHQYPC*ACQ 325
++ C C+ R +C R YT+ QY C +CQ
Sbjct: 26 RQSCGCAPRVQPSCSCQRTTYTQPQQYSC-SCQ 57
>U64859-9|AAC69090.1| 378|Caenorhabditis elegans Activated in
blocked unfolded proteinresponse protein 9 protein.
Length = 378
Score = 27.5 bits (58), Expect = 4.9
Identities = 20/68 (29%), Positives = 25/68 (36%)
Frame = +2
Query: 230 QRDCSCSRCDCQQACSRKDYTEAHQYPC*ACQALQVQTRLP*ESQRE*EATEGSQXCRQD 409
Q CSC + Q+CS + Q P +C Q Q + Q A Q CRQ
Sbjct: 34 QSQCSCQQVQQTQSCSCQSAPVQQQAP--SCSCAQPQQTQTVQVQSTQCAPACQQSCRQQ 91
Query: 410 RQPEETAS 433
Q S
Sbjct: 92 CQSAPAVS 99
>U64859-8|AAC69096.1| 378|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 57
protein.
Length = 378
Score = 27.5 bits (58), Expect = 4.9
Identities = 20/68 (29%), Positives = 25/68 (36%)
Frame = +2
Query: 230 QRDCSCSRCDCQQACSRKDYTEAHQYPC*ACQALQVQTRLP*ESQRE*EATEGSQXCRQD 409
Q CSC + Q+CS + Q P +C Q Q + Q A Q CRQ
Sbjct: 34 QSQCSCQQVQQTQSCSCQSAPVQQQAP--SCSCAQPQQTQTVQVQSTQCAPACQQSCRQQ 91
Query: 410 RQPEETAS 433
Q S
Sbjct: 92 CQSAPAVS 99
>Z66519-13|CAI46547.1| 281|Caenorhabditis elegans Hypothetical
protein B0334.2b protein.
Length = 281
Score = 27.1 bits (57), Expect = 6.5
Identities = 17/53 (32%), Positives = 21/53 (39%), Gaps = 2/53 (3%)
Frame = -1
Query: 218 CLSMVYFVWHTLLNCTIASDVYN--VSNFVHFHVRGERNSSMCAGTCERTSXL 66
C + Y VW T+LN + S V N F RG M G C S +
Sbjct: 183 CKVITYLVWGTILNIMLISYVTNWFTQLFARQPFRGTDVEVMIGGQCITVSEI 235
>Z66519-12|CAA91376.2| 288|Caenorhabditis elegans Hypothetical
protein B0334.2a protein.
Length = 288
Score = 27.1 bits (57), Expect = 6.5
Identities = 17/53 (32%), Positives = 21/53 (39%), Gaps = 2/53 (3%)
Frame = -1
Query: 218 CLSMVYFVWHTLLNCTIASDVYN--VSNFVHFHVRGERNSSMCAGTCERTSXL 66
C + Y VW T+LN + S V N F RG M G C S +
Sbjct: 190 CKVITYLVWGTILNIMLISYVTNWFTQLFARQPFRGTDVEVMIGGQCITVSEI 242
>Z83244-6|CAD18877.1| 502|Caenorhabditis elegans Hypothetical
protein W06F12.2c protein.
Length = 502
Score = 26.6 bits (56), Expect = 8.6
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = -2
Query: 220 PVFPWYTLCGIPF*TAPLPLMSTMSPTLY 134
PVFP Y+ G+P P+PL T T Y
Sbjct: 226 PVFPSYSRAGVP--QTPIPLPPTQINTPY 252
>Z83244-5|CAB54315.1| 568|Caenorhabditis elegans Hypothetical
protein W06F12.2b protein.
Length = 568
Score = 26.6 bits (56), Expect = 8.6
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = -2
Query: 220 PVFPWYTLCGIPF*TAPLPLMSTMSPTLY 134
PVFP Y+ G+P P+PL T T Y
Sbjct: 226 PVFPSYSRAGVP--QTPIPLPPTQINTPY 252
>Z83244-4|CAB54314.1| 562|Caenorhabditis elegans Hypothetical
protein W06F12.2a protein.
Length = 562
Score = 26.6 bits (56), Expect = 8.6
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = -2
Query: 220 PVFPWYTLCGIPF*TAPLPLMSTMSPTLY 134
PVFP Y+ G+P P+PL T T Y
Sbjct: 220 PVFPSYSRAGVP--QTPIPLPPTQINTPY 246
>U61946-10|AAC24388.1| 1827|Caenorhabditis elegans Hypothetical
protein F47C12.1 protein.
Length = 1827
Score = 26.6 bits (56), Expect = 8.6
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = +2
Query: 248 SRCDCQQACSRKDYTEAHQYPC*AC 322
S +C+QAC Y+ + PC AC
Sbjct: 1610 SASECKQACKTGTYSNSGLEPCSAC 1634
>AL117193-5|CAB54985.1| 335|Caenorhabditis elegans Hypothetical
protein Y105C5A.6 protein.
Length = 335
Score = 26.6 bits (56), Expect = 8.6
Identities = 12/39 (30%), Positives = 18/39 (46%), Gaps = 1/39 (2%)
Frame = +2
Query: 230 QRDCSCS-RCDCQQACSRKDYTEAHQYPC*ACQALQVQT 343
++ C C+ + +C R YT+ QY C VQT
Sbjct: 26 RQSCGCAPKIQPSCSCQRTTYTQPQQYSCSCQNTAPVQT 64
>AL117193-4|CAB54984.1| 335|Caenorhabditis elegans Hypothetical
protein Y105C5A.5 protein.
Length = 335
Score = 26.6 bits (56), Expect = 8.6
Identities = 12/39 (30%), Positives = 18/39 (46%), Gaps = 1/39 (2%)
Frame = +2
Query: 230 QRDCSCS-RCDCQQACSRKDYTEAHQYPC*ACQALQVQT 343
++ C C+ + +C R YT+ QY C VQT
Sbjct: 26 RQSCGCAPKVQPSCSCQRTTYTQPQQYSCSCQNTAPVQT 64
>AL117193-3|CAB54983.1| 335|Caenorhabditis elegans Hypothetical
protein Y105C5A.4 protein.
Length = 335
Score = 26.6 bits (56), Expect = 8.6
Identities = 12/39 (30%), Positives = 18/39 (46%), Gaps = 1/39 (2%)
Frame = +2
Query: 230 QRDCSCS-RCDCQQACSRKDYTEAHQYPC*ACQALQVQT 343
++ C C+ + +C R YT+ QY C VQT
Sbjct: 26 RQSCGCAPKVQPSCSCQRTTYTQPQQYSCSCQNTAPVQT 64
>AL117193-2|CAB54982.1| 335|Caenorhabditis elegans Hypothetical
protein Y105C5A.3 protein.
Length = 335
Score = 26.6 bits (56), Expect = 8.6
Identities = 12/39 (30%), Positives = 18/39 (46%), Gaps = 1/39 (2%)
Frame = +2
Query: 230 QRDCSCS-RCDCQQACSRKDYTEAHQYPC*ACQALQVQT 343
++ C C+ + +C R YT+ QY C VQT
Sbjct: 26 RQSCGCAPKIQPSCSCQRTTYTQPQQYSCSCQNTAPVQT 64
>AF016451-13|AAB66007.1| 445|Caenorhabditis elegans Activated in
blocked unfolded proteinresponse protein 8 protein.
Length = 445
Score = 26.6 bits (56), Expect = 8.6
Identities = 20/68 (29%), Positives = 32/68 (47%)
Frame = +2
Query: 230 QRDCSCSRCDCQQACSRKDYTEAHQYPC*ACQALQVQTRLP*ESQRE*EATEGSQXCRQD 409
Q CSC + Q+CS + Q P +C Q QT+ Q + ++T+ + C+Q
Sbjct: 35 QSQCSCQQVQQTQSCSCQSAPVQQQSPSCSCAQPQ-QTQ-----QVQVQSTQCAPACQQS 88
Query: 410 RQPEETAS 433
Q + AS
Sbjct: 89 CQQQCQAS 96
>AF016451-5|AAB65995.1| 438|Caenorhabditis elegans Activated in
blocked unfolded proteinresponse protein 7 protein.
Length = 438
Score = 26.6 bits (56), Expect = 8.6
Identities = 20/68 (29%), Positives = 32/68 (47%)
Frame = +2
Query: 230 QRDCSCSRCDCQQACSRKDYTEAHQYPC*ACQALQVQTRLP*ESQRE*EATEGSQXCRQD 409
Q CSC + Q+CS + Q P +C Q QT+ Q + ++T+ + C+Q
Sbjct: 35 QSQCSCQQVQQTQSCSCQSAPVQQQSPSCSCAQPQ-QTQ-----QVQVQSTQCAPACQQS 88
Query: 410 RQPEETAS 433
Q + AS
Sbjct: 89 CQQQCQAS 96
>AF016451-4|AAB65996.1| 388|Caenorhabditis elegans Activated in
blocked unfolded proteinresponse protein 6 protein.
Length = 388
Score = 26.6 bits (56), Expect = 8.6
Identities = 20/68 (29%), Positives = 32/68 (47%)
Frame = +2
Query: 230 QRDCSCSRCDCQQACSRKDYTEAHQYPC*ACQALQVQTRLP*ESQRE*EATEGSQXCRQD 409
Q CSC + Q+CS + Q P +C Q QT+ Q + ++T+ + C+Q
Sbjct: 35 QSQCSCQQVQQTQSCSCQSAPVQQQSPSCSCAQPQ-QTQ-----QVQVQSTQCAPACQQS 88
Query: 410 RQPEETAS 433
Q + AS
Sbjct: 89 CQQQCQAS 96
>AF016451-3|AAB66001.1| 388|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 5
protein.
Length = 388
Score = 26.6 bits (56), Expect = 8.6
Identities = 20/68 (29%), Positives = 32/68 (47%)
Frame = +2
Query: 230 QRDCSCSRCDCQQACSRKDYTEAHQYPC*ACQALQVQTRLP*ESQRE*EATEGSQXCRQD 409
Q CSC + Q+CS + Q P +C Q QT+ Q + ++T+ + C+Q
Sbjct: 35 QSQCSCQQVQQTQSCSCQSAPVQQQSPSCSCAQPQ-QTQ-----QVQVQSTQCAPACQQS 88
Query: 410 RQPEETAS 433
Q + AS
Sbjct: 89 CQQQCQAS 96
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,627,106
Number of Sequences: 27780
Number of extensions: 193365
Number of successful extensions: 656
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 639
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 656
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 809909048
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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