Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP13_F_G10
         (366 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z82276-8|CAL69741.1|  281|Caenorhabditis elegans Hypothetical pr...    27   5.4  
Z79759-1|CAB02138.2|  841|Caenorhabditis elegans Hypothetical pr...    26   7.2  
AF025465-8|AAO38628.1|  233|Caenorhabditis elegans Hypothetical ...    26   9.5  

>Z82276-8|CAL69741.1|  281|Caenorhabditis elegans Hypothetical
           protein K03D3.14 protein.
          Length = 281

 Score = 26.6 bits (56), Expect = 5.4
 Identities = 19/65 (29%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
 Frame = +3

Query: 39  SILGLILGFMVRNMGIYSLNKLLLRYNLRSFLCLI*FIPN--LSTYGLSYIYLNFRQILF 212
           SILGL+ G ++  M I+S+   LL + +   +  + ++ +  LST      +L    ++F
Sbjct: 153 SILGLVYGIIIFCMAIFSVLSALLHFPIVKKIRALTYLDSTQLSTLYTYIFWLTIFIVVF 212

Query: 213 KNIDI 227
           K I I
Sbjct: 213 KVIYI 217


>Z79759-1|CAB02138.2|  841|Caenorhabditis elegans Hypothetical
           protein ZK858.1 protein.
          Length = 841

 Score = 26.2 bits (55), Expect = 7.2
 Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
 Frame = +3

Query: 147 FIPNLSTYGLSYIYLNFRQILFKNIDIG*REIY-RGKGIFNILKNYSVFYNI 299
           F   LS+YGL  + +NF Q+   N+    R IY RG  + ++L  +   Y++
Sbjct: 216 FTGGLSSYGLVLLLVNFFQLYALNMRS--RTIYDRGVNLGHLLLRFLELYSL 265


>AF025465-8|AAO38628.1|  233|Caenorhabditis elegans Hypothetical
           protein K02E7.4 protein.
          Length = 233

 Score = 25.8 bits (54), Expect = 9.5
 Identities = 13/45 (28%), Positives = 24/45 (53%)
 Frame = +3

Query: 183 IYLNFRQILFKNIDIG*REIYRGKGIFNILKNYSVFYNIYQINNF 317
           +++N    +FK  ++  R +     +F +LKN  +FY + QI  F
Sbjct: 148 LFMNSTNFMFKISNL--RSLNPDFQVFFVLKNLKMFYFLSQIQGF 190


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,407,818
Number of Sequences: 27780
Number of extensions: 45325
Number of successful extensions: 123
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 123
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 123
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 514188384
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)