Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP13_F_F19
         (404 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF079312-1|AAC28093.1|  271|Anopheles gambiae 60S ribosomal prot...    60   2e-11
U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra...    27   0.26 
CR954256-5|CAJ14146.1|  615|Anopheles gambiae predicted protein ...    23   4.2  
AF513637-1|AAM53609.1|  214|Anopheles gambiae glutathione S-tran...    23   4.2  
AY943929-1|AAX49502.1|  755|Anopheles gambiae laccase-2 isoform ...    22   9.8  
AY943928-1|AAX49501.1|  753|Anopheles gambiae laccase-2 isoform ...    22   9.8  
AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subu...    22   9.8  

>AF079312-1|AAC28093.1|  271|Anopheles gambiae 60S ribosomal protein
           rpL7a protein.
          Length = 271

 Score = 60.5 bits (140), Expect = 2e-11
 Identities = 39/88 (44%), Positives = 49/88 (55%), Gaps = 1/88 (1%)
 Frame = +2

Query: 143 FEKRPKNFAIGQGHSANSGLXPEFVRWPKYIXHPAPRRLYFSVV*KCPPP-NQPILPRTL 319
           FEKR KN+ IGQ       L   FV+WPKYI     R +    + K PPP NQ    +TL
Sbjct: 38  FEKRVKNYGIGQNVQPKRDLS-RFVKWPKYIRIQRHRAILQKRL-KIPPPINQ--FTQTL 93

Query: 320 DKTTAKGLFQEFWEKYRPXTEAARKERL 403
           DK TA+ + +  W+KYRP    AR +RL
Sbjct: 94  DKPTAQQVMK-CWKKYRPENPIARVQRL 120



 Score = 25.8 bits (54), Expect = 0.60
 Identities = 15/36 (41%), Positives = 20/36 (55%)
 Frame = +1

Query: 205 SRICKMAQVYPASSAQKAVLQRRLKVPPSESTNFTQ 312
           SR  K  + Y      +A+LQ+RLK+PP     FTQ
Sbjct: 58  SRFVKWPK-YIRIQRHRAILQKRLKIPP-PINQFTQ 91


>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 1049

 Score = 27.1 bits (57), Expect = 0.26
 Identities = 12/41 (29%), Positives = 20/41 (48%)
 Frame = +2

Query: 242 PAPRRLYFSVV*KCPPPNQPILPRTLDKTTAKGLFQEFWEK 364
           P P  +  +V+ +C     PIL +  + + A G F + W K
Sbjct: 559 PGPDGIPSTVLKRCQTTVAPILAKLFNASLANGYFPKAWRK 599


>CR954256-5|CAJ14146.1|  615|Anopheles gambiae predicted protein
           protein.
          Length = 615

 Score = 23.0 bits (47), Expect = 4.2
 Identities = 12/27 (44%), Positives = 18/27 (66%), Gaps = 1/27 (3%)
 Frame = +1

Query: 250 QKAVLQR-RLKVPPSESTNFTQNTGQD 327
           Q+ +LQ+ RLK    +ST +T+NT  D
Sbjct: 79  QQQLLQKSRLKSSNLKSTTYTRNTEND 105


>AF513637-1|AAM53609.1|  214|Anopheles gambiae glutathione
           S-transferase D11 protein.
          Length = 214

 Score = 23.0 bits (47), Expect = 4.2
 Identities = 13/51 (25%), Positives = 22/51 (43%)
 Frame = +3

Query: 246 RPEGCTSASSESAPLRINQFYPEHWTRLQLRAFFKNFGRNTGLXLKQPGKR 398
           +PE        + P  ++  +    +R  L    + +G+N GL  K P KR
Sbjct: 40  KPEFLKINPQHTVPTLVDNDFVLWESRAILTYLCEKYGKNDGLYPKDPKKR 90


>AY943929-1|AAX49502.1|  755|Anopheles gambiae laccase-2 isoform B
           protein.
          Length = 755

 Score = 21.8 bits (44), Expect = 9.8
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = -3

Query: 282 HFQTTLKYSLLGAGCXIYLGHLTNS 208
           HF T   Y++LGA C +   + TN+
Sbjct: 167 HF-TVEYYTVLGAACQVCTPNATNT 190


>AY943928-1|AAX49501.1|  753|Anopheles gambiae laccase-2 isoform A
           protein.
          Length = 753

 Score = 21.8 bits (44), Expect = 9.8
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = -3

Query: 282 HFQTTLKYSLLGAGCXIYLGHLTNS 208
           HF T   Y++LGA C +   + TN+
Sbjct: 167 HF-TVEYYTVLGAACQVCTPNATNT 190


>AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subunit
           protein.
          Length = 837

 Score = 21.8 bits (44), Expect = 9.8
 Identities = 11/34 (32%), Positives = 14/34 (41%)
 Frame = +2

Query: 149 KRPKNFAIGQGHSANSGLXPEFVRWPKYIXHPAP 250
           K   NF +G G   +  L P     PK +  P P
Sbjct: 205 KITSNFKLGFGSFVDKVLMPYVSTVPKNLREPCP 238


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 377,879
Number of Sequences: 2352
Number of extensions: 6370
Number of successful extensions: 17
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 32494788
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)