Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP13_F_F18
         (453 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_03_0065 - 9522478-9525335,9525513-9526028,9526432-9527247,952...    29   1.7  
10_08_0897 - 21419639-21420633,21420826-21421153                       29   1.7  
03_05_0661 + 26532732-26532997,26533933-26534073,26535734-26535851     29   2.3  
01_06_0555 - 30182818-30183169,30183268-30183674,30183804-301847...    27   7.1  
08_01_0145 + 1142675-1144042                                           27   9.3  
02_03_0199 + 16263549-16263644,16264941-16265899,16267140-162677...    27   9.3  

>11_03_0065 -
           9522478-9525335,9525513-9526028,9526432-9527247,
           9527440-9527767
          Length = 1505

 Score = 29.1 bits (62), Expect = 1.7
 Identities = 19/54 (35%), Positives = 32/54 (59%), Gaps = 7/54 (12%)
 Frame = +2

Query: 50  KTIKYIY-LVCSTDYRAGQKWRHSNFRMIKNMS-PKLYLT-----GQCSMKFTN 190
           K IK++  L+  ++ RAG+KW  S F   K +S P+ +++     G  S++FTN
Sbjct: 161 KGIKFMSPLIIDSEERAGEKWPISEFIKNKTLSQPENFISYQDSKGNVSIRFTN 214


>10_08_0897 - 21419639-21420633,21420826-21421153
          Length = 440

 Score = 29.1 bits (62), Expect = 1.7
 Identities = 19/54 (35%), Positives = 32/54 (59%), Gaps = 7/54 (12%)
 Frame = +2

Query: 50  KTIKYIY-LVCSTDYRAGQKWRHSNFRMIKNMS-PKLYLT-----GQCSMKFTN 190
           K IK++  L+  ++ RAG+KW  S F   K +S P+ +++     G  S++FTN
Sbjct: 161 KGIKFMSPLIIDSEERAGEKWPISEFIKNKTLSQPENFISYQDSKGNVSIRFTN 214


>03_05_0661 + 26532732-26532997,26533933-26534073,26535734-26535851
          Length = 174

 Score = 28.7 bits (61), Expect = 2.3
 Identities = 17/56 (30%), Positives = 26/56 (46%)
 Frame = +3

Query: 279 GAVHQSTRYVHHSRVAVND*KNRAERGAQAKRFHNKSFDGITAAFAFQNRRGFPQI 446
           G        V  +  AV+D +NR E+ A+AK+  N   +G      F+ R  FP +
Sbjct: 76  GCEENGQHEVPPAHFAVSDRRNRGEKIARAKKQKNPRGEGERGDQEFRMRLSFPLV 131


>01_06_0555 -
           30182818-30183169,30183268-30183674,30183804-30184773,
           30184829-30184902,30184941-30185084,30185186-30185365,
           30185448-30185988,30186081-30186538,30187723-30187901,
           30187998-30188052,30188217-30188468
          Length = 1203

 Score = 27.1 bits (57), Expect = 7.1
 Identities = 12/34 (35%), Positives = 20/34 (58%)
 Frame = -1

Query: 270 FLQSLSQIVGLGQYYSNIFFFLQEISVFVNFIEH 169
           F+Q L ++  +   Y+ IF  L  IS+ VN ++H
Sbjct: 669 FVQDLKEMNAIISRYALIFCSLSVISIVVNLLQH 702


>08_01_0145 + 1142675-1144042
          Length = 455

 Score = 26.6 bits (56), Expect = 9.3
 Identities = 13/30 (43%), Positives = 19/30 (63%)
 Frame = -1

Query: 276 LDFLQSLSQIVGLGQYYSNIFFFLQEISVF 187
           LDF + +SQ +G G  Y   F+ LQ+I+ F
Sbjct: 388 LDFFKRISQHLGFGHRY---FYILQQINKF 414


>02_03_0199 +
           16263549-16263644,16264941-16265899,16267140-16267791,
           16267895-16267981,16268253-16268381,16269990-16270036,
           16271337-16271438,16272720-16272843,16272981-16273028,
           16273934-16274026,16274325-16274408,16274536-16274619,
           16274751-16274819,16275531-16275590,16275946-16276017,
           16276957-16277064,16278162-16278238,16278391-16278474,
           16278617-16278728,16278778-16278810,16278811-16278900,
           16279012-16279077,16279163-16279258,16279446-16279497,
           16279723-16279775,16279998-16280018
          Length = 1165

 Score = 26.6 bits (56), Expect = 9.3
 Identities = 12/30 (40%), Positives = 16/30 (53%)
 Frame = -2

Query: 158 NTASVTCFLSFENLNVSIFVRLCSLLNTPN 69
           N  +  CFL+  N N+S  +R  SL   PN
Sbjct: 98  NIGNSRCFLTVCNKNLSFLIRNKSLFGNPN 127


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,127,548
Number of Sequences: 37544
Number of extensions: 239112
Number of successful extensions: 468
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 462
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 468
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 883560296
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)