Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP13_F_F18
         (453 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L15188-9|AAM22024.1|  618|Caenorhabditis elegans Hypothetical pr...    31   0.52 
Z81556-7|CAB04519.1|  569|Caenorhabditis elegans Hypothetical pr...    30   0.69 
Z67737-3|CAA91538.2|  399|Caenorhabditis elegans Hypothetical pr...    27   8.4  
U80454-8|ABC71798.1|  623|Caenorhabditis elegans Hypothetical pr...    27   8.4  
U80454-7|ABC48245.1|  650|Caenorhabditis elegans Hypothetical pr...    27   8.4  

>L15188-9|AAM22024.1|  618|Caenorhabditis elegans Hypothetical
           protein C14B9.2 protein.
          Length = 618

 Score = 30.7 bits (66), Expect = 0.52
 Identities = 16/36 (44%), Positives = 19/36 (52%)
 Frame = +1

Query: 280 GQCIKVQDMYIIPELPLMIKKTGPNVALKPSDFTIN 387
           G C   +  Y+  EL   +KKT PNV L   D TIN
Sbjct: 530 GHCKSFESKYV--ELAQALKKTQPNVVLAKMDATIN 563


>Z81556-7|CAB04519.1|  569|Caenorhabditis elegans Hypothetical
           protein F58G1.7 protein.
          Length = 569

 Score = 30.3 bits (65), Expect = 0.69
 Identities = 17/54 (31%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
 Frame = -1

Query: 294 FDALPRLDFLQSLSQIVGLGQYYSNIFFFLQEISVFVNFI-EH*PVKYSFGDMF 136
           +  +P +  L+      G+ Q + +IF FL   ++F+NF+ EH     SFG  F
Sbjct: 252 YSPMPTMHKLRLTLTFYGVFQLFISIFIFL-SATIFLNFLREHCKFAMSFGSFF 304


>Z67737-3|CAA91538.2|  399|Caenorhabditis elegans Hypothetical
           protein T01H10.3 protein.
          Length = 399

 Score = 26.6 bits (56), Expect = 8.4
 Identities = 14/37 (37%), Positives = 21/37 (56%)
 Frame = +1

Query: 139 HVTEAVFNGSVFYEVYKYADFLKEKENVAIILAKAYD 249
           HV+   +N S++  V KY DFL+ + N+   L   YD
Sbjct: 13  HVSSIYYNHSLY--VPKYYDFLETQTNLTKNLFSGYD 47


>U80454-8|ABC71798.1|  623|Caenorhabditis elegans Hypothetical
           protein T16A1.1b protein.
          Length = 623

 Score = 26.6 bits (56), Expect = 8.4
 Identities = 11/24 (45%), Positives = 16/24 (66%), Gaps = 2/24 (8%)
 Frame = +2

Query: 44  IVKTIKY--IYLVCSTDYRAGQKW 109
           I+KT ++  IYL C  +Y  G+KW
Sbjct: 198 IIKTNEFLGIYLNCQKEYHEGRKW 221


>U80454-7|ABC48245.1|  650|Caenorhabditis elegans Hypothetical
           protein T16A1.1a protein.
          Length = 650

 Score = 26.6 bits (56), Expect = 8.4
 Identities = 11/24 (45%), Positives = 16/24 (66%), Gaps = 2/24 (8%)
 Frame = +2

Query: 44  IVKTIKY--IYLVCSTDYRAGQKW 109
           I+KT ++  IYL C  +Y  G+KW
Sbjct: 198 IIKTNEFLGIYLNCQKEYHEGRKW 221


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,924,270
Number of Sequences: 27780
Number of extensions: 231002
Number of successful extensions: 533
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 520
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 533
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 799252350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)