Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP13_F_F18
         (453 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ667188-1|ABG75740.1|  383|Apis mellifera histamine-gated chlor...    22   2.7  
AB201717-1|BAD90662.1|  107|Apis mellifera apime-corazonin prepr...    21   4.7  
DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    21   8.3  

>DQ667188-1|ABG75740.1|  383|Apis mellifera histamine-gated chloride
           channel protein.
          Length = 383

 Score = 22.2 bits (45), Expect = 2.7
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = +2

Query: 86  DYRAGQKWRHSNFRMIKNMS 145
           D    Q WR S  R+ +NMS
Sbjct: 54  DIFLAQSWRDSRLRLPENMS 73


>AB201717-1|BAD90662.1|  107|Apis mellifera apime-corazonin
           preprohormone protein.
          Length = 107

 Score = 21.4 bits (43), Expect = 4.7
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = -2

Query: 122 NLNVSIFVRLCSLLNTPNK 66
           N+N  +F   C LLN P +
Sbjct: 69  NINNQLFQTPCELLNFPKR 87


>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 20.6 bits (41), Expect = 8.3
 Identities = 8/34 (23%), Positives = 21/34 (61%)
 Frame = +1

Query: 283 QCIKVQDMYIIPELPLMIKKTGPNVALKPSDFTI 384
           +C+ ++ + + P +PL+ ++   ++ L   D+TI
Sbjct: 402 RCL-LETLRMYPPVPLIAREIKTDLKLASGDYTI 434


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 129,118
Number of Sequences: 438
Number of extensions: 2604
Number of successful extensions: 4
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 11943513
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)