Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP13_F_F12
         (651 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_06_1659 + 38961637-38961639,38962361-38962433,38962531-389626...   204   6e-53
01_06_1660 + 38966999-38967001,38967685-38967757,38967841-389679...   201   3e-52
08_02_1410 - 26876243-26876497,26877129-26877239,26877240-268773...    28   7.4  
03_03_0279 - 16134422-16134608,16134703-16134947,16135046-161353...    27   9.8  
02_05_0714 - 31164078-31164554                                         27   9.8  
02_04_0381 - 22497519-22497769,22498157-22498247                       27   9.8  

>01_06_1659 +
           38961637-38961639,38962361-38962433,38962531-38962613,
           38962732-38962858,38962950-38963029,38963112-38963228,
           38963393-38963527,38963714-38963883,38963970-38964087
          Length = 301

 Score =  204 bits (497), Expect = 6e-53
 Identities = 103/185 (55%), Positives = 121/185 (65%)
 Frame = +2

Query: 71  VKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQ 250
           VK  K   YFKR+QVKFKRRR+GKTDY AR RL  QDKNKYNTPKYR +   +NKD+T Q
Sbjct: 5   VKTQKTHAYFKRFQVKFKRRRQGKTDYRARIRLTNQDKNKYNTPKYRFV---TNKDITAQ 61

Query: 251 VAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXX 430
           + Y+ I GD ++ AAYSHELPRYG++VGLTNYAAAY TG                     
Sbjct: 62  IVYATIAGDIVMAAAYSHELPRYGLEVGLTNYAAAYCTGLLLARRVLTLRGLDQEYEGNV 121

Query: 431 XXXXXEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRXLAM 610
                +Y VEP D     FR  LDVGL RTTTG RVFGA+KGA+DGGL++PHS KR    
Sbjct: 122 EATGEDYYVEPADE-RRPFRALLDVGLIRTTTGNRVFGALKGALDGGLDIPHSDKRFAGF 180

Query: 611 MQNPK 625
            ++ K
Sbjct: 181 KKDEK 185


>01_06_1660 +
           38966999-38967001,38967685-38967757,38967841-38967923,
           38968042-38968168,38968260-38968339,38968428-38968544,
           38968711-38968845,38969046-38969215,38969300-38969417
          Length = 301

 Score =  201 bits (491), Expect = 3e-52
 Identities = 102/185 (55%), Positives = 120/185 (64%)
 Frame = +2

Query: 71  VKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQ 250
           VK  K   Y KR+QVKFKRRR+GKTDY AR RL  QDKNKYNTPKYR +   +NKD+T Q
Sbjct: 5   VKTQKTNAYHKRFQVKFKRRRQGKTDYRARIRLTNQDKNKYNTPKYRFV---TNKDITAQ 61

Query: 251 VAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXX 430
           + Y+ I GD ++ AAYSHELPRYG++VGLTNYAAAY TG                     
Sbjct: 62  IVYATIAGDIVMAAAYSHELPRYGLEVGLTNYAAAYCTGLLLARRVLKLRGLDQEYEGNI 121

Query: 431 XXXXXEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRXLAM 610
                +Y VEP D     FR  LDVGL RTTTG RVFGA+KGA+DGGL++PHS KR    
Sbjct: 122 EATGEDYYVEPADE-RRPFRALLDVGLIRTTTGNRVFGALKGALDGGLDIPHSDKRFAGF 180

Query: 611 MQNPK 625
            ++ K
Sbjct: 181 KKDEK 185


>08_02_1410 -
           26876243-26876497,26877129-26877239,26877240-26877324,
           26877620-26877672,26878318-26878440,26878514-26878597,
           26878708-26878773,26879512-26879584,26879854-26879888,
           26879970-26880212
          Length = 375

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
 Frame = +2

Query: 188 KYNTPKYRLIVRLSNKDVTCQVAYSRI--EGDHIVCAAYSHEL 310
           +YNT +YR +  +S K V C+ +   +  E DH+   A S  L
Sbjct: 274 RYNTSRYRELPHISIKCVFCKASVEPMGEESDHVHIIALSDAL 316


>03_03_0279 -
           16134422-16134608,16134703-16134947,16135046-16135364,
           16135451-16135675,16135780-16135946,16136030-16136146,
           16136234-16136407,16136489-16136584,16136669-16136885,
           16137005-16137123,16137249-16137441,16137562-16137713,
           16137809-16137938,16138667-16138776
          Length = 816

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 12/20 (60%), Positives = 13/20 (65%)
 Frame = -1

Query: 249 WHVTSLLERRTIRRYLGVLY 190
           W   S LERR  RRYL +LY
Sbjct: 775 WKYVSNLERRETRRYLEMLY 794


>02_05_0714 - 31164078-31164554
          Length = 158

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = +1

Query: 556 CC*RWPQCSSFHQKXPGYDAES 621
           CC  WP  +S HQ+  G + ES
Sbjct: 17  CCFPWPSSASSHQRVGGAEEES 38


>02_04_0381 - 22497519-22497769,22498157-22498247
          Length = 113

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = +1

Query: 319 WCEGWSDKLCCSIFNWSAISTKTASK 396
           +C+G+ DK CC   +WS    K  SK
Sbjct: 90  YCDGYDDKSCCD--DWSGDCHKCCSK 113


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,172,866
Number of Sequences: 37544
Number of extensions: 342198
Number of successful extensions: 802
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 775
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 796
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1620349964
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)