Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP13_F_F12
         (651 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB208980-1|BAD92217.1|  303|Homo sapiens ribosomal protein L5 va...   269   5e-72
BC132972-1|AAI32973.1|  297|Homo sapiens ribosomal protein L5 pr...   269   7e-72
BC132970-1|AAI32971.1|  297|Homo sapiens ribosomal protein L5 pr...   269   7e-72
BC109370-1|AAI09371.1|  297|Homo sapiens ribosomal protein L5 pr...   269   7e-72
AL162740-1|CAI22505.1|  297|Homo sapiens ribosomal protein L5 pr...   269   7e-72
AK222604-1|BAD96324.1|  297|Homo sapiens ribosomal protein L5 va...   269   7e-72
U14966-1|AAA85654.1|  297|Homo sapiens ribosomal protein L5 prot...   267   3e-71
BC001882-1|AAH01882.1|  101|Homo sapiens RPL5 protein protein.        185   1e-46
AL162740-2|CAI22506.1|  126|Homo sapiens ribosomal protein L5 pr...   167   2e-41
U76609-1|AAB18361.1|  145|Homo sapiens ribosomal L5 protein prot...    51   4e-06

>AB208980-1|BAD92217.1|  303|Homo sapiens ribosomal protein L5
           variant protein.
          Length = 303

 Score =  269 bits (660), Expect = 5e-72
 Identities = 124/182 (68%), Positives = 141/182 (77%)
 Frame = +2

Query: 53  FKIWDSVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSN 232
           F+    VKVVKNK YFKRYQVKF+RRREGKTDYYARKRLV+QDKNKYNTPKYR+IVR++N
Sbjct: 5   FRRMGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTN 64

Query: 233 KDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXX 412
           +D+ CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYAAAY TG               
Sbjct: 65  RDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDK 124

Query: 413 XXXXXXXXXXXEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSI 592
                      EYNVE +D  PGAF CYLD GLARTTTG +VFGA+KGAVDGGL++PHS 
Sbjct: 125 IYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGGLSIPHST 184

Query: 593 KR 598
           KR
Sbjct: 185 KR 186



 Score = 37.1 bits (82), Expect = 0.054
 Identities = 14/19 (73%), Positives = 18/19 (94%)
 Frame = +1

Query: 592 QKXPGYDAESKKFNAEVHR 648
           ++ PGYD+ESK+FNAEVHR
Sbjct: 185 KRFPGYDSESKEFNAEVHR 203


>BC132972-1|AAI32973.1|  297|Homo sapiens ribosomal protein L5
           protein.
          Length = 297

 Score =  269 bits (659), Expect = 7e-72
 Identities = 123/176 (69%), Positives = 139/176 (78%)
 Frame = +2

Query: 71  VKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQ 250
           VKVVKNK YFKRYQVKF+RRREGKTDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+ CQ
Sbjct: 4   VKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDIICQ 63

Query: 251 VAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXX 430
           +AY+RIEGD IVCAAY+HELP+YGVKVGLTNYAAAY TG                     
Sbjct: 64  IAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYEGQV 123

Query: 431 XXXXXEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKR 598
                EYNVE +D  PGAF CYLD GLARTTTG +VFGA+KGAVDGGL++PHS KR
Sbjct: 124 EVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGGLSIPHSTKR 179



 Score = 37.1 bits (82), Expect = 0.054
 Identities = 14/19 (73%), Positives = 18/19 (94%)
 Frame = +1

Query: 592 QKXPGYDAESKKFNAEVHR 648
           ++ PGYD+ESK+FNAEVHR
Sbjct: 178 KRFPGYDSESKEFNAEVHR 196


>BC132970-1|AAI32971.1|  297|Homo sapiens ribosomal protein L5
           protein.
          Length = 297

 Score =  269 bits (659), Expect = 7e-72
 Identities = 123/176 (69%), Positives = 139/176 (78%)
 Frame = +2

Query: 71  VKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQ 250
           VKVVKNK YFKRYQVKF+RRREGKTDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+ CQ
Sbjct: 4   VKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDIICQ 63

Query: 251 VAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXX 430
           +AY+RIEGD IVCAAY+HELP+YGVKVGLTNYAAAY TG                     
Sbjct: 64  IAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYEGQV 123

Query: 431 XXXXXEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKR 598
                EYNVE +D  PGAF CYLD GLARTTTG +VFGA+KGAVDGGL++PHS KR
Sbjct: 124 EVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGGLSIPHSTKR 179



 Score = 37.1 bits (82), Expect = 0.054
 Identities = 14/19 (73%), Positives = 18/19 (94%)
 Frame = +1

Query: 592 QKXPGYDAESKKFNAEVHR 648
           ++ PGYD+ESK+FNAEVHR
Sbjct: 178 KRFPGYDSESKEFNAEVHR 196


>BC109370-1|AAI09371.1|  297|Homo sapiens ribosomal protein L5
           protein.
          Length = 297

 Score =  269 bits (659), Expect = 7e-72
 Identities = 123/176 (69%), Positives = 139/176 (78%)
 Frame = +2

Query: 71  VKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQ 250
           VKVVKNK YFKRYQVKF+RRREGKTDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+ CQ
Sbjct: 4   VKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDIICQ 63

Query: 251 VAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXX 430
           +AY+RIEGD IVCAAY+HELP+YGVKVGLTNYAAAY TG                     
Sbjct: 64  IAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYEGQV 123

Query: 431 XXXXXEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKR 598
                EYNVE +D  PGAF CYLD GLARTTTG +VFGA+KGAVDGGL++PHS KR
Sbjct: 124 EVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGGLSIPHSTKR 179



 Score = 37.1 bits (82), Expect = 0.054
 Identities = 14/19 (73%), Positives = 18/19 (94%)
 Frame = +1

Query: 592 QKXPGYDAESKKFNAEVHR 648
           ++ PGYD+ESK+FNAEVHR
Sbjct: 178 KRFPGYDSESKEFNAEVHR 196


>AL162740-1|CAI22505.1|  297|Homo sapiens ribosomal protein L5
           protein.
          Length = 297

 Score =  269 bits (659), Expect = 7e-72
 Identities = 123/176 (69%), Positives = 139/176 (78%)
 Frame = +2

Query: 71  VKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQ 250
           VKVVKNK YFKRYQVKF+RRREGKTDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+ CQ
Sbjct: 4   VKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDIICQ 63

Query: 251 VAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXX 430
           +AY+RIEGD IVCAAY+HELP+YGVKVGLTNYAAAY TG                     
Sbjct: 64  IAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYEGQV 123

Query: 431 XXXXXEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKR 598
                EYNVE +D  PGAF CYLD GLARTTTG +VFGA+KGAVDGGL++PHS KR
Sbjct: 124 EVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGGLSIPHSTKR 179



 Score = 37.1 bits (82), Expect = 0.054
 Identities = 14/19 (73%), Positives = 18/19 (94%)
 Frame = +1

Query: 592 QKXPGYDAESKKFNAEVHR 648
           ++ PGYD+ESK+FNAEVHR
Sbjct: 178 KRFPGYDSESKEFNAEVHR 196


>AK222604-1|BAD96324.1|  297|Homo sapiens ribosomal protein L5
           variant protein.
          Length = 297

 Score =  269 bits (659), Expect = 7e-72
 Identities = 123/176 (69%), Positives = 139/176 (78%)
 Frame = +2

Query: 71  VKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQ 250
           VKVVKNK YFKRYQVKF+RRREGKTDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+ CQ
Sbjct: 4   VKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDIICQ 63

Query: 251 VAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXX 430
           +AY+RIEGD IVCAAY+HELP+YGVKVGLTNYAAAY TG                     
Sbjct: 64  IAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYEGQV 123

Query: 431 XXXXXEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKR 598
                EYNVE +D  PGAF CYLD GLARTTTG +VFGA+KGAVDGGL++PHS KR
Sbjct: 124 EVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGGLSIPHSTKR 179



 Score = 37.1 bits (82), Expect = 0.054
 Identities = 14/19 (73%), Positives = 18/19 (94%)
 Frame = +1

Query: 592 QKXPGYDAESKKFNAEVHR 648
           ++ PGYD+ESK+FNAEVHR
Sbjct: 178 KRFPGYDSESKEFNAEVHR 196


>U14966-1|AAA85654.1|  297|Homo sapiens ribosomal protein L5
           protein.
          Length = 297

 Score =  267 bits (654), Expect = 3e-71
 Identities = 122/176 (69%), Positives = 138/176 (78%)
 Frame = +2

Query: 71  VKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQ 250
           VKVVKNK YFKRYQVKF+RRREGKTDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+ CQ
Sbjct: 4   VKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDIICQ 63

Query: 251 VAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXX 430
           +AY+RIEGD IVCA Y+HELP+YGVKVGLTNYAAAY TG                     
Sbjct: 64  IAYARIEGDMIVCARYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYEGQV 123

Query: 431 XXXXXEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKR 598
                EYNVE +D  PGAF CYLD GLARTTTG +VFGA+KGAVDGGL++PHS KR
Sbjct: 124 EVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGGLSIPHSTKR 179



 Score = 37.1 bits (82), Expect = 0.054
 Identities = 14/19 (73%), Positives = 18/19 (94%)
 Frame = +1

Query: 592 QKXPGYDAESKKFNAEVHR 648
           ++ PGYD+ESK+FNAEVHR
Sbjct: 178 KRFPGYDSESKEFNAEVHR 196


>BC001882-1|AAH01882.1|  101|Homo sapiens RPL5 protein protein.
          Length = 101

 Score =  185 bits (450), Expect = 1e-46
 Identities = 81/95 (85%), Positives = 92/95 (96%)
 Frame = +2

Query: 71  VKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQ 250
           VKVVKNK YFKRYQVKF+RRREGKTDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+ CQ
Sbjct: 4   VKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDIICQ 63

Query: 251 VAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAA 355
           +AY+RIEGD IVCAAY+HELP+YGVKVGLTNYAAA
Sbjct: 64  IAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAA 98


>AL162740-2|CAI22506.1|  126|Homo sapiens ribosomal protein L5
           protein.
          Length = 126

 Score =  167 bits (407), Expect = 2e-41
 Identities = 76/125 (60%), Positives = 90/125 (72%)
 Frame = +2

Query: 212 LIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXX 391
           +IVR++N+D+ CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYAAAY TG        
Sbjct: 1   MIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLL 60

Query: 392 XXXXXXXXXXXXXXXXXXEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGG 571
                             EYNVE +D  PGAF CYLD GLARTTTG +VFGA+KGAVDGG
Sbjct: 61  NRFGMDKIYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGG 120

Query: 572 LNVPH 586
           L++PH
Sbjct: 121 LSIPH 125


>U76609-1|AAB18361.1|  145|Homo sapiens ribosomal L5 protein
           protein.
          Length = 145

 Score = 50.8 bits (116), Expect = 4e-06
 Identities = 21/27 (77%), Positives = 25/27 (92%)
 Frame = +2

Query: 518 TTTGARVFGAMKGAVDGGLNVPHSIKR 598
           TTTG +VFGA+KGAVDGGL++PHS KR
Sbjct: 1   TTTGNKVFGALKGAVDGGLSIPHSTKR 27



 Score = 37.1 bits (82), Expect = 0.054
 Identities = 14/19 (73%), Positives = 18/19 (94%)
 Frame = +1

Query: 592 QKXPGYDAESKKFNAEVHR 648
           ++ PGYD+ESK+FNAEVHR
Sbjct: 26  KRFPGYDSESKEFNAEVHR 44


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 94,821,392
Number of Sequences: 237096
Number of extensions: 2014800
Number of successful extensions: 3948
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3736
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3939
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7253890590
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)