Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP13_F_F12
(651 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z49967-5|CAA90251.1| 293|Caenorhabditis elegans Hypothetical pr... 234 3e-62
AL132860-13|CAB60509.1| 292|Caenorhabditis elegans Hypothetical... 31 0.94
Z69361-2|CAA93288.1| 2165|Caenorhabditis elegans Hypothetical pr... 30 1.6
Z69360-10|CAA93287.1| 2165|Caenorhabditis elegans Hypothetical p... 30 1.6
Z92806-5|CAB07255.2| 1251|Caenorhabditis elegans Hypothetical pr... 28 5.0
Z93390-6|CAB07675.4| 816|Caenorhabditis elegans Hypothetical pr... 28 6.6
Z93390-1|CAE46674.1| 540|Caenorhabditis elegans Hypothetical pr... 28 6.6
Z80214-7|CAC42261.2| 816|Caenorhabditis elegans Hypothetical pr... 28 6.6
U39472-1|AAK31395.1| 534|Caenorhabditis elegans Cytochrome p450... 27 8.7
>Z49967-5|CAA90251.1| 293|Caenorhabditis elegans Hypothetical
protein F54C9.5 protein.
Length = 293
Score = 234 bits (573), Expect = 3e-62
Identities = 112/185 (60%), Positives = 130/185 (70%)
Frame = +2
Query: 71 VKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQ 250
VKV+KNK YFKRYQVK +RRREGKTDYYARKRL VQDKNKYNTPKYRLIVR++NKDV Q
Sbjct: 4 VKVIKNKAYFKRYQVKLRRRREGKTDYYARKRLTVQDKNKYNTPKYRLIVRITNKDVVAQ 63
Query: 251 VAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXX 430
+AYS+IEGD +V +AYSHELPRYG+KVGLTNYAAAY+TG
Sbjct: 64 LAYSKIEGDVVVASAYSHELPRYGLKVGLTNYAAAYATGLLLARRHLKTIGLDSTYKGHE 123
Query: 431 XXXXXEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRXLAM 610
+YNVE + F+ LD+GLARTTTG+++F MKG DGG+NVPHS R
Sbjct: 124 ELTGEDYNVEE-EGDRAPFKAVLDIGLARTTTGSKIFAVMKGVADGGINVPHSESRFFGF 182
Query: 611 MQNPK 625
Q K
Sbjct: 183 DQESK 187
Score = 28.3 bits (60), Expect = 5.0
Identities = 10/15 (66%), Positives = 13/15 (86%)
Frame = +1
Query: 604 GYDAESKKFNAEVHR 648
G+D ESK++NAE HR
Sbjct: 181 GFDQESKEYNAEAHR 195
>AL132860-13|CAB60509.1| 292|Caenorhabditis elegans Hypothetical
protein Y56A3A.15 protein.
Length = 292
Score = 30.7 bits (66), Expect = 0.94
Identities = 15/49 (30%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Frame = -3
Query: 187 VLVLNNEAFTSIIIS-FPFTTPLEFYLVPLEVLFVLHNFNXIPYFKSKL 44
V + ++E +S ++ FP + L Y VP+ + HNF + +FK+K+
Sbjct: 147 VKIASSEIQSSHLLELFPSLSNLGVYNVPINTQILTHNFYWLEFFKTKV 195
>Z69361-2|CAA93288.1| 2165|Caenorhabditis elegans Hypothetical protein
F25H8.3 protein.
Length = 2165
Score = 29.9 bits (64), Expect = 1.6
Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = -2
Query: 296 KQRTQYGHLQSESRPPGMLHLCWRDAQSDDI*VCYI-CS 183
+QR ++ + + P HLC R+++ DI CYI CS
Sbjct: 980 RQRVSCVKMEGDRQTPASEHLCDRNSKPSDIASCYIDCS 1018
>Z69360-10|CAA93287.1| 2165|Caenorhabditis elegans Hypothetical
protein F25H8.3 protein.
Length = 2165
Score = 29.9 bits (64), Expect = 1.6
Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = -2
Query: 296 KQRTQYGHLQSESRPPGMLHLCWRDAQSDDI*VCYI-CS 183
+QR ++ + + P HLC R+++ DI CYI CS
Sbjct: 980 RQRVSCVKMEGDRQTPASEHLCDRNSKPSDIASCYIDCS 1018
>Z92806-5|CAB07255.2| 1251|Caenorhabditis elegans Hypothetical
protein K10G4.5 protein.
Length = 1251
Score = 28.3 bits (60), Expect = 5.0
Identities = 14/43 (32%), Positives = 24/43 (55%), Gaps = 3/43 (6%)
Frame = +2
Query: 191 YNTPKYRLIVRLSNKDVTCQVAYSRIEGDHI---VCAAYSHEL 310
YN P+YR +++L K C+ + GD++ +CA + EL
Sbjct: 548 YNDPEYRNVMKLKIKSPICE--QCEVTGDNLPFGICAEHETEL 588
>Z93390-6|CAB07675.4| 816|Caenorhabditis elegans Hypothetical
protein T23B5.3a protein.
Length = 816
Score = 27.9 bits (59), Expect = 6.6
Identities = 12/29 (41%), Positives = 14/29 (48%)
Frame = -2
Query: 338 SDQPSHHNVATHVNKQRTQYGHLQSESRP 252
SD P HH +H + Q Q HLQ P
Sbjct: 17 SDVPMHHVYPSHHHHQHYQLPHLQQHPHP 45
>Z93390-1|CAE46674.1| 540|Caenorhabditis elegans Hypothetical
protein T23B5.3b protein.
Length = 540
Score = 27.9 bits (59), Expect = 6.6
Identities = 12/29 (41%), Positives = 14/29 (48%)
Frame = -2
Query: 338 SDQPSHHNVATHVNKQRTQYGHLQSESRP 252
SD P HH +H + Q Q HLQ P
Sbjct: 17 SDVPMHHVYPSHHHHQHYQLPHLQQHPHP 45
>Z80214-7|CAC42261.2| 816|Caenorhabditis elegans Hypothetical
protein T23B5.3a protein.
Length = 816
Score = 27.9 bits (59), Expect = 6.6
Identities = 12/29 (41%), Positives = 14/29 (48%)
Frame = -2
Query: 338 SDQPSHHNVATHVNKQRTQYGHLQSESRP 252
SD P HH +H + Q Q HLQ P
Sbjct: 17 SDVPMHHVYPSHHHHQHYQLPHLQQHPHP 45
>U39472-1|AAK31395.1| 534|Caenorhabditis elegans Cytochrome p450
family protein 23A1 protein.
Length = 534
Score = 27.5 bits (58), Expect = 8.7
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = -1
Query: 141 FPSRRLLNFTWYLLKYCLFFTTLTESHILNLSYK 40
F R LNF Y+ Y F T +T I L+YK
Sbjct: 19 FRIMRTLNFDNYMATYIYFLTCITLYAIYELNYK 52
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,883,883
Number of Sequences: 27780
Number of extensions: 308089
Number of successful extensions: 798
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 759
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 797
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1444744186
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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