Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP13_F_F09
         (643 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z68751-1|CAA92971.1|  210|Caenorhabditis elegans Hypothetical pr...   233   6e-62
AF039053-3|AAC25880.2|  349|Caenorhabditis elegans Hypothetical ...    30   1.2  
AL032648-8|CAI46618.1|  365|Caenorhabditis elegans Hypothetical ...    27   8.6  

>Z68751-1|CAA92971.1|  210|Caenorhabditis elegans Hypothetical
           protein T05E11.1 protein.
          Length = 210

 Score =  233 bits (571), Expect = 6e-62
 Identities = 111/139 (79%), Positives = 121/139 (87%)
 Frame = +2

Query: 227 AADIPEIKLFGRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSAGRYAHKRFRKAQCPIVE 406
           A + PE+ LFG+WS   V VSD+SL DYI VKEK AKYLPHSAGR+  +RFRKA CPIVE
Sbjct: 17  ATEAPEVALFGKWSLQSVNVSDISLVDYIPVKEKSAKYLPHSAGRFQVRRFRKAACPIVE 76

Query: 407 RLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPREDSTXIGR 586
           RL NSLMMHGRNNGKKLM VRIVKHAFEII+LLTGENP+QVLV A+INSGPREDST IGR
Sbjct: 77  RLANSLMMHGRNNGKKLMTVRIVKHAFEIIYLLTGENPVQVLVNAVINSGPREDSTRIGR 136

Query: 587 AGTVRXQAVDVSPLRRVNQ 643
           AGTVR QAVDV+PLRRVNQ
Sbjct: 137 AGTVRRQAVDVAPLRRVNQ 155


>AF039053-3|AAC25880.2|  349|Caenorhabditis elegans Hypothetical
           protein C45H4.13 protein.
          Length = 349

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 11/32 (34%), Positives = 19/32 (59%)
 Frame = +3

Query: 72  FKSITTWYYKFCQVTVNKYNNIFRYQSWPRRT 167
           + +++T +YKFC     K++ IF  + W  RT
Sbjct: 16  YSAMSTNFYKFCHFEPKKFDRIFLLKLWKFRT 47


>AL032648-8|CAI46618.1|  365|Caenorhabditis elegans Hypothetical
           protein Y54G9A.10 protein.
          Length = 365

 Score = 27.5 bits (58), Expect = 8.6
 Identities = 9/24 (37%), Positives = 18/24 (75%)
 Frame = -2

Query: 72  IKLTFLLLNRNYNLALSKVHAEKA 1
           + +T LL +R+YNL ++++H + A
Sbjct: 213 VAITLLLYSRHYNLKITRIHEDYA 236


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,184,222
Number of Sequences: 27780
Number of extensions: 294374
Number of successful extensions: 663
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 647
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 663
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1427403330
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)