Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP13_F_F07
         (643 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_06_0185 - 26201013-26201429,26201537-26201695,26201774-262026...    31   0.78 
03_05_0047 - 20244899-20245203,20245442-20246438,20246561-20247700     30   1.4  
08_01_0606 - 5321751-5321819,5321950-5322192,5322279-5322377,532...    30   1.8  
10_01_0211 - 2268191-2268247,2268916-2268944,2270892-2271777           28   7.2  
03_02_0333 + 7566644-7566995,7567432-7567463,7568301-7568457,756...    28   7.2  

>05_06_0185 -
           26201013-26201429,26201537-26201695,26201774-26202601,
           26203483-26203605
          Length = 508

 Score = 31.1 bits (67), Expect = 0.78
 Identities = 20/72 (27%), Positives = 37/72 (51%), Gaps = 8/72 (11%)
 Frame = +1

Query: 277 YRKILLLMLIKISYCFKNSVNLAVNRTF---QYNIYN---YDTWINLQVNNTIEQ--ILD 432
           +R+ +  ++ K+ +  KN   + + RTF    YN+ N    D W+N+ +   IE+  +  
Sbjct: 89  WRENVRELVNKVDHIMKNHSGIGL-RTFGLQSYNLINTYYLDRWLNIAITPAIEELSLTQ 147

Query: 433 FTEDSDKLLGFP 468
           F E++ K   FP
Sbjct: 148 FPENNTKYYNFP 159


>03_05_0047 - 20244899-20245203,20245442-20246438,20246561-20247700
          Length = 813

 Score = 30.3 bits (65), Expect = 1.4
 Identities = 15/41 (36%), Positives = 25/41 (60%)
 Frame = +3

Query: 195 STNNEITLTNTIRS*LV*NY*NKNNDGISKDIIVNAN*NII 317
           ST+N+ T  + I   +  +  N  N+GIS DI+VNA+  ++
Sbjct: 690 STSNQATAGSLIEDCIEISRKNSGNNGISSDILVNASTELV 730


>08_01_0606 -
           5321751-5321819,5321950-5322192,5322279-5322377,
           5322463-5322942,5323069-5323167,5323306-5323427,
           5323517-5323635,5323734-5323801,5323889-5324074,
           5324169-5324244,5324339-5324418,5324505-5324561,
           5324980-5325122,5325208-5325352,5325652-5325813,
           5325893-5326078,5326263-5326355,5326437-5326597,
           5327005-5327109,5328263-5328278
          Length = 902

 Score = 29.9 bits (64), Expect = 1.8
 Identities = 14/31 (45%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
 Frame = +1

Query: 394 NLQVN-NTIEQILDFTEDSDKLLGFPYKSSR 483
           N QVN N +E+I+D+   S KL   P+K +R
Sbjct: 60  NFQVNQNDVEKIIDWENTSPKLAEIPFKPAR 90


>10_01_0211 - 2268191-2268247,2268916-2268944,2270892-2271777
          Length = 323

 Score = 27.9 bits (59), Expect = 7.2
 Identities = 14/39 (35%), Positives = 17/39 (43%)
 Frame = +3

Query: 522 SLRPHNRKACPHGNSRWVLQTDDYFLDAKRXGAGTLCPH 638
           SL+   RK C  G +RWVLQ           G+G    H
Sbjct: 205 SLQIWERKVCSEGVTRWVLQRTAELNKVLELGSGVKTSH 243


>03_02_0333 +
           7566644-7566995,7567432-7567463,7568301-7568457,
           7568568-7568740,7568872-7568973,7569053-7569199,
           7569274-7570248
          Length = 645

 Score = 27.9 bits (59), Expect = 7.2
 Identities = 13/36 (36%), Positives = 18/36 (50%), Gaps = 3/36 (8%)
 Frame = +1

Query: 526 YGHTTERRVLMGT---PVGCYRQTITSWMLNDXGQG 624
           Y H     V++ T   P GCY+  +T W LN+   G
Sbjct: 546 YSHPAVTGVMLWTALHPNGCYQMCLTDWNLNNLPVG 581


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,648,777
Number of Sequences: 37544
Number of extensions: 258997
Number of successful extensions: 455
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 449
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 455
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1584867848
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)