Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP13_F_F07
         (643 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF387862-2|AAL56548.1|  942|Anopheles gambiae pol polyprotein pr...    27   0.38 
AF387858-1|AAL58708.1|  209|Anopheles gambiae integrase protein.       27   0.38 
AF387857-1|AAL58707.1|  215|Anopheles gambiae integrase protein.       27   0.38 
AF387850-1|AAL58705.1|  209|Anopheles gambiae integrase protein.       27   0.38 
AF543192-1|AAN40409.1|  636|Anopheles gambiae amino acid transpo...    26   0.88 

>AF387862-2|AAL56548.1|  942|Anopheles gambiae pol polyprotein
           protein.
          Length = 942

 Score = 27.5 bits (58), Expect = 0.38
 Identities = 12/34 (35%), Positives = 20/34 (58%)
 Frame = -2

Query: 141 FSTYLYSHRSIKFIDITCEIIYSSKISKMIHLED 40
           F  Y  +H++ +F+D T   I  S+ +K I +ED
Sbjct: 268 FVGYADNHKAFRFVDPTSNKITLSRDAKFIEMED 301


>AF387858-1|AAL58708.1|  209|Anopheles gambiae integrase protein.
          Length = 209

 Score = 27.5 bits (58), Expect = 0.38
 Identities = 12/34 (35%), Positives = 20/34 (58%)
 Frame = -2

Query: 141 FSTYLYSHRSIKFIDITCEIIYSSKISKMIHLED 40
           F  Y  +H++ +F+D T   I  S+ +K I +ED
Sbjct: 38  FVGYADNHKAFRFVDPTSNKITLSRDAKFIEMED 71


>AF387857-1|AAL58707.1|  215|Anopheles gambiae integrase protein.
          Length = 215

 Score = 27.5 bits (58), Expect = 0.38
 Identities = 12/34 (35%), Positives = 20/34 (58%)
 Frame = -2

Query: 141 FSTYLYSHRSIKFIDITCEIIYSSKISKMIHLED 40
           F  Y  +H++ +F+D T   I  S+ +K I +ED
Sbjct: 38  FVGYADNHKAFRFVDPTSNKITLSRDAKFIEMED 71


>AF387850-1|AAL58705.1|  209|Anopheles gambiae integrase protein.
          Length = 209

 Score = 27.5 bits (58), Expect = 0.38
 Identities = 12/34 (35%), Positives = 20/34 (58%)
 Frame = -2

Query: 141 FSTYLYSHRSIKFIDITCEIIYSSKISKMIHLED 40
           F  Y  +H++ +F+D T   I  S+ +K I +ED
Sbjct: 38  FVGYADNHKAFRFVDPTSNKITLSRDAKFIEMED 71


>AF543192-1|AAN40409.1|  636|Anopheles gambiae amino acid
           transporter Ag_AAT8 protein.
          Length = 636

 Score = 26.2 bits (55), Expect = 0.88
 Identities = 18/65 (27%), Positives = 28/65 (43%)
 Frame = +2

Query: 437 PRTLISSLGFPTRVHVTTNSTLTSDHPLFITATQQKGVSSWELPLGATDRRLLLGC*TTW 616
           P  + S  G  +    ++N TLTS   L+ T    K +   +  +G  D RL L    +W
Sbjct: 205 PNCIDSLAGSASPNDSSSNRTLTSSWELYFTKVVLKELDGIDDGIGLPDLRLTLFLVLSW 264

Query: 617 GRDFV 631
              F+
Sbjct: 265 SLVFL 269


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 616,238
Number of Sequences: 2352
Number of extensions: 11293
Number of successful extensions: 19
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 63141405
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)