Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP13_F_E23
(574 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_06_0351 + 22466160-22466217,22466514-22467052,22467186-224672... 54 8e-08
09_06_0242 - 21806370-21806483,21806574-21806660,21806865-218069... 54 8e-08
01_01_1227 + 9912646-9913056,9913306-9913413,9913517-9913672,991... 48 5e-06
11_01_0557 + 4394754-4396040 42 3e-04
05_05_0059 + 22011168-22011662,22012668-22012894,22013029-220133... 40 0.002
01_06_1363 - 36681605-36681789,36681875-36681908,36682017-366821... 38 0.006
03_02_0137 + 5832608-5833590,5833680-5833731,5833827-5833904,583... 33 0.21
05_03_0294 + 11818391-11820268,11820332-11820550,11820752-118216... 32 0.37
01_01_1224 - 9888726-9888820,9889042-9889085,9889194-9889282,988... 31 0.49
05_03_0227 + 10655204-10655269,10656333-10656393,10656570-106566... 30 1.1
03_02_0757 - 10940993-10941112,10941218-10941418,10941661-109417... 29 3.5
06_03_0419 - 20583812-20584123,20585911-20586006,20586195-205862... 28 4.6
10_01_0147 - 1722947-1723168,1723268-1723464,1723654-1723690,172... 28 6.1
04_03_0438 + 15929220-15929453,15929564-15929764,15930874-159310... 28 6.1
12_01_0547 - 4336013-4336452,4336849-4336909 27 8.0
10_02_0165 - 6063944-6064552 27 8.0
06_03_0833 - 25196091-25196372,25196464-25196565,25196640-251968... 27 8.0
01_06_0717 - 31446860-31447074,31447183-31447270,31448909-314490... 27 8.0
>09_06_0351 +
22466160-22466217,22466514-22467052,22467186-22467293,
22467391-22467546,22467916-22468131,22468639-22468776,
22468880-22468981,22469089-22469146,22469346-22469408,
22469543-22469640
Length = 511
Score = 54.0 bits (124), Expect = 8e-08
Identities = 25/73 (34%), Positives = 41/73 (56%)
Frame = +3
Query: 354 CGPVNPNKTSVVSTQDGDYAWDSSLQGYILSSFFYGYVITQIPFGILSKRFGARLFLGVG 533
C N + + ++ W + G I SSFF+GY++TQI GI + RFG ++ LG G
Sbjct: 195 CNMDRVNMSIAILPMSSEFGWSPATVGLIQSSFFWGYLLTQILGGIWADRFGGKVVLGFG 254
Query: 534 MLINSVFGLLXPV 572
++ S+ +L P+
Sbjct: 255 VVWWSIATVLTPL 267
>09_06_0242 -
21806370-21806483,21806574-21806660,21806865-21806917,
21806999-21807140,21807406-21807501,21808617-21808785,
21808859-21808939,21809032-21809106,21810322-21810387,
21811013-21811158,21811898-21812344
Length = 491
Score = 54.0 bits (124), Expect = 8e-08
Identities = 25/72 (34%), Positives = 39/72 (54%)
Frame = +3
Query: 354 CGPVNPNKTSVVSTQDGDYAWDSSLQGYILSSFFYGYVITQIPFGILSKRFGARLFLGVG 533
C N + + Y W+SS G + SSFF+GY ++Q+P G L+K FG R L +G
Sbjct: 145 CNMDKVNLSVAIIPMSHQYGWNSSTAGLVQSSFFWGYALSQLPGGWLAKLFGGRRVLEIG 204
Query: 534 MLINSVFGLLXP 569
++ S+ + P
Sbjct: 205 VVAWSLATAIIP 216
>01_01_1227 +
9912646-9913056,9913306-9913413,9913517-9913672,
9914110-9914325,9914436-9914645,9914722-9914859,
9915076-9915177,9915508-9915603
Length = 478
Score = 48.0 bits (109), Expect = 5e-06
Identities = 23/72 (31%), Positives = 36/72 (50%)
Frame = +3
Query: 354 CGPVNPNKTSVVSTQDGDYAWDSSLQGYILSSFFYGYVITQIPFGILSKRFGARLFLGVG 533
C N + + ++ W+ G I SSFF+GY++TQI GI + G + LG G
Sbjct: 133 CNMDRVNMSIAILPMSAEFGWNPQTVGLIQSSFFWGYLLTQIAGGIWADTVGGKTVLGFG 192
Query: 534 MLINSVFGLLXP 569
++ S+ L P
Sbjct: 193 VIWWSIATALTP 204
>11_01_0557 + 4394754-4396040
Length = 428
Score = 42.3 bits (95), Expect = 3e-04
Identities = 20/48 (41%), Positives = 31/48 (64%)
Frame = +3
Query: 429 QGYILSSFFYGYVITQIPFGILSKRFGARLFLGVGMLINSVFGLLXPV 572
+G ILS F+YGYV++QIP G ++R G RL L + ++ S + P+
Sbjct: 45 KGMILSMFYYGYVLSQIPGGWAAQRLGGRLVLLLSFVLWSSICAVVPL 92
>05_05_0059 +
22011168-22011662,22012668-22012894,22013029-22013377,
22013464-22013508,22013589-22013735,22013851-22013988,
22014126-22014159,22014258-22014430
Length = 535
Score = 39.5 bits (88), Expect = 0.002
Identities = 18/54 (33%), Positives = 28/54 (51%)
Frame = +3
Query: 408 YAWDSSLQGYILSSFFYGYVITQIPFGILSKRFGARLFLGVGMLINSVFGLLXP 569
Y W SS G + SSF +GYV + + G L+ R+G + + + S+ L P
Sbjct: 154 YGWSSSFLGIVQSSFLWGYVFSSMVGGALADRYGGKKVMAGAAALWSLATFLTP 207
>01_06_1363 -
36681605-36681789,36681875-36681908,36682017-36682154,
36682578-36682724,36682821-36682865,36683043-36683331,
36683443-36683669,36684109-36684528
Length = 494
Score = 37.9 bits (84), Expect = 0.006
Identities = 17/54 (31%), Positives = 28/54 (51%)
Frame = +3
Query: 408 YAWDSSLQGYILSSFFYGYVITQIPFGILSKRFGARLFLGVGMLINSVFGLLXP 569
Y W S G + SSF +GY+++ I G L +G + + G+ + S+ L P
Sbjct: 129 YGWTPSFAGVVQSSFLWGYLVSPIIGGALVDYYGGKRVMAYGVALWSLATFLSP 182
>03_02_0137 +
5832608-5833590,5833680-5833731,5833827-5833904,
5835228-5835347,5835618-5835716,5835821-5835975,
5836117-5836257,5836395-5836503
Length = 578
Score = 32.7 bits (71), Expect = 0.21
Identities = 19/46 (41%), Positives = 22/46 (47%)
Frame = -3
Query: 230 NPVPSSKPASVARAALIF*SRLFPNEHAGSLSLGHHGERGKRVKNP 93
N PSSKPAS AR + PN A + + GE G KNP
Sbjct: 26 NTTPSSKPASRARLSHASSENAHPNIPAAAAAAAAAGEAGTPSKNP 71
>05_03_0294 + 11818391-11820268,11820332-11820550,11820752-11821644,
11829889-11829905,11829927-11830183
Length = 1087
Score = 31.9 bits (69), Expect = 0.37
Identities = 15/43 (34%), Positives = 20/43 (46%)
Frame = -3
Query: 326 SKSCVVDHSNDSDRHVRPHDVSVCHSEKQHERNPVPSSKPASV 198
S + VV+H D R PH VS +Q P P+ P S+
Sbjct: 910 SAALVVEHDEDDPRSAHPHPVSTRPGREQGGEAPEPNGGPRSL 952
>01_01_1224 -
9888726-9888820,9889042-9889085,9889194-9889282,
9889390-9889434,9889849-9889956,9890042-9890127,
9890324-9890411,9890669-9890872,9891251-9891326,
9891429-9891478,9891753-9891815,9891942-9891995,
9892079-9892181,9892266-9892368,9892563-9892623,
9892746-9892786,9893183-9893348
Length = 491
Score = 31.5 bits (68), Expect = 0.49
Identities = 13/47 (27%), Positives = 30/47 (63%), Gaps = 4/47 (8%)
Frame = +3
Query: 432 GYILSSFFYGYVITQIPFGILSKRFGARLFLGVGML----INSVFGL 560
G++ +++F G I+ +P+GI + ++G + + + +L N++FGL
Sbjct: 87 GFVGATYFLGRTISAVPWGIFADKYGRKPCIVISILSVIVFNTLFGL 133
>05_03_0227 +
10655204-10655269,10656333-10656393,10656570-10656672,
10656768-10656870,10656951-10657004,10657124-10657186,
10657884-10658105,10658249-10658336,10658561-10658646,
10659003-10659110,10659201-10659245,10659511-10659601,
10659662-10659765
Length = 397
Score = 30.3 bits (65), Expect = 1.1
Identities = 12/47 (25%), Positives = 28/47 (59%), Gaps = 4/47 (8%)
Frame = +3
Query: 432 GYILSSFFYGYVITQIPFGILSKRFGARLFLGVGML----INSVFGL 560
G++ +S+F + +P+GI + ++G + + + +L N++FGL
Sbjct: 40 GFVAASYFLARTFSSVPWGIFADKYGRKPCIVISILSVIFFNTLFGL 86
>03_02_0757 -
10940993-10941112,10941218-10941418,10941661-10941795,
10941948-10942088,10942214-10942405,10942624-10942748,
10942828-10942903,10943024-10943173,10943467-10943856,
10944078-10944227,10944430-10944710,10945034-10945230,
10945836-10946035,10946422-10946469,10946566-10946688,
10946771-10946882,10946988-10947103,10947526-10947660
Length = 963
Score = 28.7 bits (61), Expect = 3.5
Identities = 16/53 (30%), Positives = 24/53 (45%)
Frame = -3
Query: 365 DWAAFSVYLFSDDSKSCVVDHSNDSDRHVRPHDVSVCHSEKQHERNPVPSSKP 207
DWA F V FSD+S S + S S H+ + ++ + +P S P
Sbjct: 794 DWANFHVQAFSDESLSFDEECSRTSSVDGGLHESPITNTGSSISKTTMPQSVP 846
>06_03_0419 -
20583812-20584123,20585911-20586006,20586195-20586298,
20586565-20586649
Length = 198
Score = 28.3 bits (60), Expect = 4.6
Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 5/46 (10%)
Frame = +3
Query: 327 VIAEEIDTECGPVNPNKTS-----VVSTQDGDYAWDSSLQGYILSS 449
V+ +E + CGPV PN +S ++ DG S L G+IL +
Sbjct: 64 VLQKESPSWCGPVGPNGSSHTGPQTLNPSDGKIFLHSGLTGFILQN 109
>10_01_0147 -
1722947-1723168,1723268-1723464,1723654-1723690,
1724688-1725584
Length = 450
Score = 27.9 bits (59), Expect = 6.1
Identities = 14/51 (27%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = +2
Query: 116 FHHGVQDSRSPRARLGTTWTRRSTQPSLHWRAWNSALGYV-HAVSRNGKRL 265
F + + + R P A + T W R +T+P + + A G++ HA+ + + L
Sbjct: 86 FVNRLLELRDPTAMIDTFWLRYTTRPEGNTNSNEDAYGWISHALQKQARVL 136
>04_03_0438 +
15929220-15929453,15929564-15929764,15930874-15931046,
15931131-15931233,15931763-15932107
Length = 351
Score = 27.9 bits (59), Expect = 6.1
Identities = 11/28 (39%), Positives = 14/28 (50%)
Frame = +2
Query: 128 VQDSRSPRARLGTTWTRRSTQPSLHWRA 211
V+ R P+A TTW T P W+A
Sbjct: 323 VRGDRYPQAMANTTWQNSETPPLSSWKA 350
>12_01_0547 - 4336013-4336452,4336849-4336909
Length = 166
Score = 27.5 bits (58), Expect = 8.0
Identities = 15/34 (44%), Positives = 20/34 (58%)
Frame = +2
Query: 128 VQDSRSPRARLGTTWTRRSTQPSLHWRAWNSALG 229
VQD + RLG +W RR + +HW AW A+G
Sbjct: 12 VQDRGKRQRRLGASW-RRGLR-FIHW-AWMGAMG 42
>10_02_0165 - 6063944-6064552
Length = 202
Score = 27.5 bits (58), Expect = 8.0
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = +2
Query: 266 HHEDEHVCRYRCYGQPHSSYC 328
H ED+ CR R G+P S C
Sbjct: 100 HEEDDSRCRLRLTGEPEGSRC 120
>06_03_0833 -
25196091-25196372,25196464-25196565,25196640-25196838,
25196978-25197278,25197471-25197645,25197842-25198012,
25198207-25198239
Length = 420
Score = 27.5 bits (58), Expect = 8.0
Identities = 17/53 (32%), Positives = 29/53 (54%), Gaps = 5/53 (9%)
Frame = +3
Query: 24 CWPAHQHYVGSRASDA---L*YLVRFRI--LHALSPFTMVSKTQGARVLVWEQ 167
C P H + SD L +L R++ L + SP++M+ +T GAR+ + E+
Sbjct: 103 CTPGHDISNVAEDSDKEQELNFLARYQQTKLSSFSPYSMLKETSGARIFMREE 155
>01_06_0717 -
31446860-31447074,31447183-31447270,31448909-31449012,
31449618-31449745,31450461-31450555,31461823-31463115,
31463188-31464039,31464568-31464621
Length = 942
Score = 27.5 bits (58), Expect = 8.0
Identities = 13/40 (32%), Positives = 18/40 (45%)
Frame = -3
Query: 326 SKSCVVDHSNDSDRHVRPHDVSVCHSEKQHERNPVPSSKP 207
S + VV+ D+ R PH VS +Q P P+ P
Sbjct: 653 SAALVVERDEDNPRSAHPHPVSTRPGREQGGEAPEPNGGP 692
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,395,681
Number of Sequences: 37544
Number of extensions: 321863
Number of successful extensions: 995
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 958
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 995
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1328870592
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -