Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP13_F_E21
         (548 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC063474-1|AAH63474.1|  376|Homo sapiens GPATC2 protein protein.       31   2.7  
BC042193-1|AAH42193.1|  376|Homo sapiens GPATC2 protein protein.       31   2.7  
BC027719-1|AAH27719.1|  216|Homo sapiens GPATC2 protein protein.       31   2.7  
AL354659-2|CAH70664.1|  528|Homo sapiens G patch domain containi...    31   2.7  
AL354659-1|CAH70663.1|  376|Homo sapiens G patch domain containi...    31   2.7  
AK001114-1|BAA91509.1|  528|Homo sapiens protein ( Homo sapiens ...    31   2.7  
D38024-1|BAA07227.1|  853|Homo sapiens facioscapulohumeral muscu...    30   4.6  

>BC063474-1|AAH63474.1|  376|Homo sapiens GPATC2 protein protein.
          Length = 376

 Score = 31.1 bits (67), Expect = 2.7
 Identities = 15/44 (34%), Positives = 19/44 (43%)
 Frame = +2

Query: 119 NLAHDHSDDEPQAQTNKRKPGRGAVFFFFLNKPFWYTCDLKVDN 250
           N   DHSD + Q    KR+P           +P W+  D  VDN
Sbjct: 109 NNKKDHSDSDDQMLVAKRRPSSNLNNNVRGKRPLWHESDFAVDN 152


>BC042193-1|AAH42193.1|  376|Homo sapiens GPATC2 protein protein.
          Length = 376

 Score = 31.1 bits (67), Expect = 2.7
 Identities = 15/44 (34%), Positives = 19/44 (43%)
 Frame = +2

Query: 119 NLAHDHSDDEPQAQTNKRKPGRGAVFFFFLNKPFWYTCDLKVDN 250
           N   DHSD + Q    KR+P           +P W+  D  VDN
Sbjct: 109 NNKKDHSDSDDQMLVAKRRPSSNLNNNVRGKRPLWHESDFAVDN 152


>BC027719-1|AAH27719.1|  216|Homo sapiens GPATC2 protein protein.
          Length = 216

 Score = 31.1 bits (67), Expect = 2.7
 Identities = 15/44 (34%), Positives = 19/44 (43%)
 Frame = +2

Query: 119 NLAHDHSDDEPQAQTNKRKPGRGAVFFFFLNKPFWYTCDLKVDN 250
           N   DHSD + Q    KR+P           +P W+  D  VDN
Sbjct: 109 NNKKDHSDSDDQMLVAKRRPSSNLNNNVRGKRPLWHESDFAVDN 152


>AL354659-2|CAH70664.1|  528|Homo sapiens G patch domain containing
           2 protein.
          Length = 528

 Score = 31.1 bits (67), Expect = 2.7
 Identities = 15/44 (34%), Positives = 19/44 (43%)
 Frame = +2

Query: 119 NLAHDHSDDEPQAQTNKRKPGRGAVFFFFLNKPFWYTCDLKVDN 250
           N   DHSD + Q    KR+P           +P W+  D  VDN
Sbjct: 109 NNKKDHSDSDDQMLVAKRRPSSNLNNNVRGKRPLWHESDFAVDN 152


>AL354659-1|CAH70663.1|  376|Homo sapiens G patch domain containing
           2 protein.
          Length = 376

 Score = 31.1 bits (67), Expect = 2.7
 Identities = 15/44 (34%), Positives = 19/44 (43%)
 Frame = +2

Query: 119 NLAHDHSDDEPQAQTNKRKPGRGAVFFFFLNKPFWYTCDLKVDN 250
           N   DHSD + Q    KR+P           +P W+  D  VDN
Sbjct: 109 NNKKDHSDSDDQMLVAKRRPSSNLNNNVRGKRPLWHESDFAVDN 152


>AK001114-1|BAA91509.1|  528|Homo sapiens protein ( Homo sapiens
           cDNA FLJ10252 fis, clone HEMBB1000807. ).
          Length = 528

 Score = 31.1 bits (67), Expect = 2.7
 Identities = 15/44 (34%), Positives = 19/44 (43%)
 Frame = +2

Query: 119 NLAHDHSDDEPQAQTNKRKPGRGAVFFFFLNKPFWYTCDLKVDN 250
           N   DHSD + Q    KR+P           +P W+  D  VDN
Sbjct: 109 NNKKDHSDSDDQMLVAKRRPSSNLNNNVRGKRPLWHESDFAVDN 152


>D38024-1|BAA07227.1|  853|Homo sapiens facioscapulohumeral muscular
           dystrophy protein.
          Length = 853

 Score = 30.3 bits (65), Expect = 4.6
 Identities = 18/54 (33%), Positives = 26/54 (48%)
 Frame = -1

Query: 188 PPYLVSFYWFVLAVRRRSGRARGCVFSSRRSGRCGTKPGPXNPLSVRIILRPPS 27
           PP LVS     +  +R + R+RG     RR+G     P P  PL + + L  P+
Sbjct: 300 PPRLVSPCCRRVGAQRAASRSRGIPGEVRRAGPRNAPPSPLPPLPLPLRLSGPT 353


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 70,574,656
Number of Sequences: 237096
Number of extensions: 1310827
Number of successful extensions: 2453
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2361
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2447
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5421005376
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)