Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP13_F_E21
         (548 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY075397-1|AAL68229.1|  827|Drosophila melanogaster LD28101p pro...    33   0.25 
AE014296-83|AAN11439.1|  827|Drosophila melanogaster CG32344-PA ...    33   0.25 
AF246991-1|AAF64300.1| 1640|Drosophila melanogaster unknown prot...    29   4.1  
AE014296-64|AAF47364.2| 1773|Drosophila melanogaster CG7020-PA p...    29   4.1  
AY095055-1|AAM11383.1| 1349|Drosophila melanogaster LD43045p pro...    29   5.5  
AE014297-3749|AAF56430.2| 2695|Drosophila melanogaster CG11856-P...    29   5.5  
L23195-1|AAA60323.1| 4639|Drosophila melanogaster cytoplasmic dy...    28   7.2  
AE014296-903|AAF47942.3| 4639|Drosophila melanogaster CG7507-PA,...    28   7.2  

>AY075397-1|AAL68229.1|  827|Drosophila melanogaster LD28101p
           protein.
          Length = 827

 Score = 33.1 bits (72), Expect = 0.25
 Identities = 11/30 (36%), Positives = 21/30 (70%)
 Frame = +2

Query: 59  AGSXVPASFRSGRFDDWKKRNLAHDHSDDE 148
           +G+ +PASF++GR+ +WK+++   D    E
Sbjct: 702 SGAWIPASFKTGRYAEWKEKSKIEDQLQRE 731


>AE014296-83|AAN11439.1|  827|Drosophila melanogaster CG32344-PA
           protein.
          Length = 827

 Score = 33.1 bits (72), Expect = 0.25
 Identities = 11/30 (36%), Positives = 21/30 (70%)
 Frame = +2

Query: 59  AGSXVPASFRSGRFDDWKKRNLAHDHSDDE 148
           +G+ +PASF++GR+ +WK+++   D    E
Sbjct: 702 SGAWIPASFKTGRYAEWKEKSKIEDQLQRE 731


>AF246991-1|AAF64300.1| 1640|Drosophila melanogaster unknown
           protein.
          Length = 1640

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 18/54 (33%), Positives = 24/54 (44%)
 Frame = -3

Query: 162 VCACGSSSEWSCARLRFFQSSKRPLRNEAGTXEPALSTNHLASAVLKHNYVKIE 1
           +C C SSSE       F  S +RP R   G    A     L+ A L H  V+++
Sbjct: 646 ICPCASSSEV------FTVSLRRPGRGSCGFSPSATGRGVLSMAALSHGVVRVD 693


>AE014296-64|AAF47364.2| 1773|Drosophila melanogaster CG7020-PA
           protein.
          Length = 1773

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 18/54 (33%), Positives = 24/54 (44%)
 Frame = -3

Query: 162 VCACGSSSEWSCARLRFFQSSKRPLRNEAGTXEPALSTNHLASAVLKHNYVKIE 1
           +C C SSSE       F  S +RP R   G    A     L+ A L H  V+++
Sbjct: 779 ICPCASSSEV------FTVSLRRPGRGSCGFSPSATGRGVLSMAALSHGVVRVD 826


>AY095055-1|AAM11383.1| 1349|Drosophila melanogaster LD43045p
           protein.
          Length = 1349

 Score = 28.7 bits (61), Expect = 5.5
 Identities = 8/28 (28%), Positives = 19/28 (67%)
 Frame = -2

Query: 382 FKLCIKNTLNQNTLHYYVFDTTYTYTIH 299
           FK+C+ + LN+N ++    +T++ + +H
Sbjct: 717 FKICLNHVLNENVVYREKTETSWMFAVH 744


>AE014297-3749|AAF56430.2| 2695|Drosophila melanogaster CG11856-PA
            protein.
          Length = 2695

 Score = 28.7 bits (61), Expect = 5.5
 Identities = 8/28 (28%), Positives = 19/28 (67%)
 Frame = -2

Query: 382  FKLCIKNTLNQNTLHYYVFDTTYTYTIH 299
            FK+C+ + LN+N ++    +T++ + +H
Sbjct: 2086 FKICLNHVLNENVVYREKTETSWMFAVH 2113


>L23195-1|AAA60323.1| 4639|Drosophila melanogaster cytoplasmic dynein
            heavy chian protein.
          Length = 4639

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
 Frame = -3

Query: 156  ACGSSSEWSCARLRFFQSSKR--PLRNEAGTXEPALSTNHLASA 31
            ACG   +W+ A++ +    KR  PLR E  + E     N LASA
Sbjct: 3374 ACGPMVKWAIAQIEYADMLKRVEPLREELRSLEEQADVN-LASA 3416


>AE014296-903|AAF47942.3| 4639|Drosophila melanogaster CG7507-PA,
            isoform A protein.
          Length = 4639

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
 Frame = -3

Query: 156  ACGSSSEWSCARLRFFQSSKR--PLRNEAGTXEPALSTNHLASA 31
            ACG   +W+ A++ +    KR  PLR E  + E     N LASA
Sbjct: 3374 ACGPMVKWAIAQIEYADMLKRVEPLREELRSLEEQADVN-LASA 3416


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,642,590
Number of Sequences: 53049
Number of extensions: 399221
Number of successful extensions: 1120
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1076
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1120
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2089831299
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)