Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP13_F_E10
(422 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_04_0360 + 22353057-22353691,22354716-22355144,22355233-223553... 105 1e-23
04_04_0141 + 23079516-23079925,23080006-23080084,23080204-230803... 105 2e-23
08_02_0753 - 20805672-20805731,20805825-20805941,20806394-208065... 103 8e-23
03_05_0881 + 28461857-28462263,28462357-28462435,28462798-284629... 101 3e-22
08_02_1026 + 23743186-23743686,23743793-23743915,23744734-237448... 98 3e-21
11_06_0360 - 22699524-22699529,22699865-22699899,22700650-227007... 89 1e-18
11_06_0036 + 19474848-19475188,19475696-19475774,19475880-194760... 74 5e-14
01_01_0767 + 5931031-5931281,5931414-5931594,5932020-5932129,593... 64 3e-11
08_02_1528 + 27666356-27667081 29 2.0
09_02_0513 - 10105746-10106438,10106523-10107040,10107156-101076... 28 2.7
02_05_0699 + 31013176-31013345,31013749-31013872,31013950-310140... 28 2.7
10_07_0052 - 12382975-12383141,12384032-12384458,12385047-12385097 27 6.2
03_05_0615 + 26137785-26138593,26139307-26141368 27 6.2
03_02_0469 + 8720119-8720199,8720295-8720372,8720496-8720570,872... 27 6.2
07_01_0163 + 1149466-1150593,1150733-1150937,1151453-1151485,115... 27 8.2
07_01_0160 + 1126674-1126937,1128442-1129998 27 8.2
05_04_0049 + 17497255-17497908 27 8.2
01_06_1607 + 38605100-38605364,38605415-38605722,38606213-38606977 27 8.2
>02_04_0360 +
22353057-22353691,22354716-22355144,22355233-22355311,
22355472-22355594,22356256-22356372,22356636-22356833
Length = 526
Score = 105 bits (252), Expect = 1e-23
Identities = 57/99 (57%), Positives = 72/99 (72%), Gaps = 4/99 (4%)
Frame = +2
Query: 137 SSTMSVDKEELVQRAKLAEQAERYDDMAAAMKEVTET--GVELSNEERNLLSVAYKNVVG 310
S + +EE V AKLAEQAERY++M M++V +T EL+ EERNLLSVAYKNV+G
Sbjct: 220 SQPAELSREENVYMAKLAEQAERYEEMVEFMEKVAKTVDSEELTVEERNLLSVAYKNVIG 279
Query: 311 ARRSSWRVISSIEQKTE--GSERKQQMAKEYRVKVXKEL 421
ARR+SWR+ISSIEQK E G+E + + KEYR K+ EL
Sbjct: 280 ARRASWRIISSIEQKEESRGNEDRCTLIKEYRGKIETEL 318
>04_04_0141 +
23079516-23079925,23080006-23080084,23080204-23080326,
23081655-23081771,23081886-23081945
Length = 262
Score = 105 bits (251), Expect = 2e-23
Identities = 56/99 (56%), Positives = 73/99 (73%), Gaps = 4/99 (4%)
Frame = +2
Query: 137 SSTMSVDKEELVQRAKLAEQAERYDDMAAAMKEVTET--GVELSNEERNLLSVAYKNVVG 310
S+ + +EE V AKLAEQAERY++M M++V +T EL+ EERNLLSVAYKNV+G
Sbjct: 2 SAQAELSREENVYMAKLAEQAERYEEMVEFMEKVAKTVDSEELTVEERNLLSVAYKNVIG 61
Query: 311 ARRSSWRVISSIEQKTE--GSERKQQMAKEYRVKVXKEL 421
ARR+SWR+ISSIEQK E G+E + + K+YR K+ EL
Sbjct: 62 ARRASWRIISSIEQKEESRGNEDRVTLIKDYRGKIETEL 100
>08_02_0753 -
20805672-20805731,20805825-20805941,20806394-20806516,
20806700-20806778,20806867-20807258
Length = 256
Score = 103 bits (246), Expect = 8e-23
Identities = 55/94 (58%), Positives = 70/94 (74%), Gaps = 4/94 (4%)
Frame = +2
Query: 152 VDKEELVQRAKLAEQAERYDDMAAAMKEVTETG--VELSNEERNLLSVAYKNVVGARRSS 325
+ +EE V AKLAEQAERY++M M++V +T EL+ EERNLLSVAYKNV+GARR+S
Sbjct: 1 MSREENVYMAKLAEQAERYEEMVEYMEKVAKTVDVEELTVEERNLLSVAYKNVIGARRAS 60
Query: 326 WRVISSIEQKTE--GSERKQQMAKEYRVKVXKEL 421
WR++SSIEQK E G+E + KEYR K+ EL
Sbjct: 61 WRIVSSIEQKEEGRGNEEHVTLIKEYRGKIEAEL 94
>03_05_0881 +
28461857-28462263,28462357-28462435,28462798-28462920,
28463632-28463748,28463861-28463917
Length = 260
Score = 101 bits (241), Expect = 3e-22
Identities = 56/98 (57%), Positives = 69/98 (70%), Gaps = 4/98 (4%)
Frame = +2
Query: 140 STMSVDKEELVQRAKLAEQAERYDDMAAAMKEVTETGV--ELSNEERNLLSVAYKNVVGA 313
S +EE V AKLAEQAERY++M M++V +T EL+ EERNLLSVAYKNV+GA
Sbjct: 2 SPAEASREENVYMAKLAEQAERYEEMVEFMEKVAKTTDVGELTVEERNLLSVAYKNVIGA 61
Query: 314 RRSSWRVISSIEQKTE--GSERKQQMAKEYRVKVXKEL 421
RR+SWR+ISSIEQK E G+E KEYR ++ EL
Sbjct: 62 RRASWRIISSIEQKEESRGNEAYVASIKEYRSRIETEL 99
>08_02_1026 +
23743186-23743686,23743793-23743915,23744734-23744850,
23744948-23745001
Length = 264
Score = 97.9 bits (233), Expect = 3e-21
Identities = 53/95 (55%), Positives = 67/95 (70%), Gaps = 7/95 (7%)
Frame = +2
Query: 158 KEELVQRAKLAEQAERYDDMAAAMKEVTET-----GVELSNEERNLLSVAYKNVVGARRS 322
+EE+V AKLAEQAERY++M M++V G EL+ EERNLLSVAYKNV+GARR+
Sbjct: 10 REEMVYMAKLAEQAERYEEMVEFMEKVVTAAAAGGGGELTVEERNLLSVAYKNVIGARRA 69
Query: 323 SWRVISSIEQKTE--GSERKQQMAKEYRVKVXKEL 421
SWR++SSIEQK E G+ A+ YR +V EL
Sbjct: 70 SWRIVSSIEQKEEGRGAAGHAAAARSYRARVEAEL 104
>11_06_0360 -
22699524-22699529,22699865-22699899,22700650-22700792,
22701165-22701220,22701367-22701454,22702737-22703037,
22704365-22704428
Length = 230
Score = 89.4 bits (212), Expect = 1e-18
Identities = 42/89 (47%), Positives = 59/89 (66%)
Frame = +2
Query: 155 DKEELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNEERNLLSVAYKNVVGARRSSWRV 334
++E++V+ AKLAEQAERYDDM MK + V++S EER L SV +K +GARR+SWR+
Sbjct: 3 EREKVVRLAKLAEQAERYDDMVEFMKTLARMDVDMSAEERLLFSVGFKKTIGARRASWRI 62
Query: 335 ISSIEQKTEGSERKQQMAKEYRVKVXKEL 421
+ S+EQK ++ Y+ KV EL
Sbjct: 63 LESLEQKVTAGDQPGVTINGYKKKVEDEL 91
>11_06_0036 +
19474848-19475188,19475696-19475774,19475880-19476002,
19476970-19477086,19477169-19477228
Length = 239
Score = 73.7 bits (173), Expect = 5e-14
Identities = 38/60 (63%), Positives = 44/60 (73%), Gaps = 2/60 (3%)
Frame = +2
Query: 248 GVELSNEERNLLSVAYKNVVGARRSSWRVISSIEQKTEGSERKQQMA--KEYRVKVXKEL 421
G EL+ EERNLLSVAYKNV+GARR+SWR+ISSIEQK EG A + YR K+ EL
Sbjct: 18 GEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEEGRGNDAHAATIRSYRGKIEAEL 77
>01_01_0767 +
5931031-5931281,5931414-5931594,5932020-5932129,
5932212-5932360,5932686-5932738,5933168-5933260
Length = 278
Score = 64.5 bits (150), Expect = 3e-11
Identities = 33/71 (46%), Positives = 46/71 (64%), Gaps = 2/71 (2%)
Frame = +2
Query: 215 MAAAMKEVTETGVELSNEERNLLSVAYKNVVGARRSSWRVISSIE--QKTEGSERKQQMA 388
M AM V + L+ EERNLLSV YKN++GA+R++ R+I SIE ++T+G E +
Sbjct: 1 MVEAMNSVAKLDEGLTKEERNLLSVGYKNLIGAKRAAMRIIGSIELKEETKGKESHVRQT 60
Query: 389 KEYRVKVXKEL 421
EYR KV E+
Sbjct: 61 AEYRRKVEAEM 71
>08_02_1528 + 27666356-27667081
Length = 241
Score = 28.7 bits (61), Expect = 2.0
Identities = 20/88 (22%), Positives = 35/88 (39%), Gaps = 1/88 (1%)
Frame = +2
Query: 143 TMSVDKEELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNEERNLLSVAYKNVVGARRS 322
T V K+ K A + + + E E + + +LLS K + + S
Sbjct: 130 TKKVQKQSKKISKKSASAEQEGSRVIKLLAEAREVAISMLESSSHLLS---KKITTSNSS 186
Query: 323 SWRVISSIEQKTE-GSERKQQMAKEYRV 403
W ++S QKT + +Q A E+ +
Sbjct: 187 KWSLVSKAFQKTRLACQEEQLQALEFAI 214
>09_02_0513 -
10105746-10106438,10106523-10107040,10107156-10107695,
10107791-10108103
Length = 687
Score = 28.3 bits (60), Expect = 2.7
Identities = 18/57 (31%), Positives = 29/57 (50%)
Frame = +2
Query: 122 ISSLPSSTMSVDKEELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNEERNLLSVA 292
I S+PS+ DKE L +A + D + +KE ++ + NE RN+L +A
Sbjct: 325 IQSMPSAMYIPDKEGLTP-LHVAAKMGHLDVIQDMLKECPDSAELVDNEGRNILHLA 380
>02_05_0699 +
31013176-31013345,31013749-31013872,31013950-31014032,
31014106-31014217,31014297-31014401,31014809-31014859,
31015893-31015979,31016325-31016402,31016477-31016530,
31016608-31016892
Length = 382
Score = 28.3 bits (60), Expect = 2.7
Identities = 23/91 (25%), Positives = 41/91 (45%), Gaps = 6/91 (6%)
Frame = +2
Query: 152 VDKEELVQRAKLAEQAERYDDMAAAMKEVTET-GVELSN-----EERNLLSVAYKNVVGA 313
V+ + L +R++L++ Y ++ A E+T E+ +ERN + +Y N
Sbjct: 250 VEAKILAKRSELSKFESEYREVLAKFTEMTSRYAQEMQTIDELLKERNAIHASYTNNTTL 309
Query: 314 RRSSWRVISSIEQKTEGSERKQQMAKEYRVK 406
+RSS K S+ Q + KE + K
Sbjct: 310 QRSSSSNKGKTSSKESKSDDDQTVKKEKKSK 340
>10_07_0052 - 12382975-12383141,12384032-12384458,12385047-12385097
Length = 214
Score = 27.1 bits (57), Expect = 6.2
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = -3
Query: 372 LSEPSVFCSIEEMTRHDDRRAPTTFL*ATERR 277
L++ S CSI ++TR D + A T TER+
Sbjct: 154 LADKSTGCSIRKITRSDKKPAKTRSFVETERK 185
>03_05_0615 + 26137785-26138593,26139307-26141368
Length = 956
Score = 27.1 bits (57), Expect = 6.2
Identities = 17/52 (32%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = +2
Query: 179 AKLAEQAE-RYDDMAAAMKEVTETGVELSNEERNLLSVAYKNVVGARRSSWR 331
+KLA AE +Y D+ +E+T ELS+ LL +A + ++ WR
Sbjct: 13 SKLATLAEQKYGDVRRIRREITFLTDELSSMNALLLKLADMEELDSQLKEWR 64
>03_02_0469 +
8720119-8720199,8720295-8720372,8720496-8720570,
8720666-8720796,8720948-8721002,8721107-8721217,
8721538-8721606,8721687-8721794,8722106-8722174,
8722266-8722320,8722499-8722701
Length = 344
Score = 27.1 bits (57), Expect = 6.2
Identities = 15/41 (36%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Frame = -2
Query: 181 GTLHQFFLVDGHRGRWKRT-NSLMPELFKPAVLECKHYFFF 62
G + Q LV H G W+R LMP L A + +Y+F+
Sbjct: 46 GAVRQMCLVVKHEG-WERLYGGLMPSLVGTAASQGVYYYFY 85
>07_01_0163 +
1149466-1150593,1150733-1150937,1151453-1151485,
1152244-1153646
Length = 922
Score = 26.6 bits (56), Expect = 8.2
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = -2
Query: 148 HRGRWKRTNSLMPELFKPAVLECKHY 71
H W+ +S+ E F+P L CKH+
Sbjct: 270 HSYGWENIHSIATEWFRPNPLCCKHH 295
>07_01_0160 + 1126674-1126937,1128442-1129998
Length = 606
Score = 26.6 bits (56), Expect = 8.2
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = -2
Query: 148 HRGRWKRTNSLMPELFKPAVLECKHY 71
H W +S+ E F+P L CKH+
Sbjct: 364 HSNHWYNIHSIAIEWFRPNPLCCKHH 389
>05_04_0049 + 17497255-17497908
Length = 217
Score = 26.6 bits (56), Expect = 8.2
Identities = 23/76 (30%), Positives = 30/76 (39%)
Frame = +1
Query: 166 TGATCQIGRTS*AI*RHGGRDEGSDGNRRRT*QRGEEPPFSCL*ECRRCPTVIMACHFLN 345
TG + R A G R +G D R R PP S L E T A +F+
Sbjct: 79 TGGVTRAARREAASRERGERGDGDDNRIWRRSNRTAPPPPSPLLEAPVLATEEHADNFVV 138
Query: 346 *TENRGFRKKTANGKR 393
G R +T +G+R
Sbjct: 139 VVAAVGHRAETGSGER 154
>01_06_1607 + 38605100-38605364,38605415-38605722,38606213-38606977
Length = 445
Score = 26.6 bits (56), Expect = 8.2
Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Frame = -3
Query: 186 NLARCTSSSLSTDIVDDGRELI-H*CPNYLNPLSWSANTIFFL 61
NL S S +D+ L+ H P+Y+NP + S N FL
Sbjct: 343 NLVNAASMGSSAAAIDELSSLVGHGTPSYINPAAGSHNYSQFL 385
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,436,841
Number of Sequences: 37544
Number of extensions: 226165
Number of successful extensions: 713
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 696
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 703
length of database: 14,793,348
effective HSP length: 75
effective length of database: 11,977,548
effective search space used: 778540620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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