Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP13_F_E10
         (422 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF069739-1|AAC63272.2|  690|Apis mellifera translation initiatio...    24   0.81 
DQ435327-1|ABD92642.1|  145|Apis mellifera OBP10 protein.              21   5.7  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    21   5.7  
S76956-1|AAB33931.1|  168|Apis mellifera olfactory receptor prot...    20   10.0 

>AF069739-1|AAC63272.2|  690|Apis mellifera translation initiation
           factor 2 protein.
          Length = 690

 Score = 23.8 bits (49), Expect = 0.81
 Identities = 10/34 (29%), Positives = 16/34 (47%)
 Frame = -2

Query: 313 GTYDILISN*KEVPLLVAKFDAGFRHFLHRGRHV 212
           G +D+ + + + V  L     A F    HRG H+
Sbjct: 183 GAFDVTLESGERVTFLDTPGHAAFISMRHRGAHI 216


>DQ435327-1|ABD92642.1|  145|Apis mellifera OBP10 protein.
          Length = 145

 Score = 21.0 bits (42), Expect = 5.7
 Identities = 8/17 (47%), Positives = 9/17 (52%)
 Frame = -3

Query: 399 LYSFAICCFLSEPSVFC 349
           L S  I C +  PSV C
Sbjct: 6   LLSLLITCLICSPSVHC 22


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 21.0 bits (42), Expect = 5.7
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = -2

Query: 127 TNSLMPELFKP 95
           TNSLM E +KP
Sbjct: 633 TNSLMDEAYKP 643


>S76956-1|AAB33931.1|  168|Apis mellifera olfactory receptor
           protein.
          Length = 168

 Score = 20.2 bits (40), Expect = 10.0
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = -1

Query: 77  TLFFFYFKPSTS 42
           TLFF Y +PS +
Sbjct: 132 TLFFIYVQPSAT 143


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 114,112
Number of Sequences: 438
Number of extensions: 2257
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 10873896
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)