Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP13_F_E08
(551 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL161712-6|CAC70141.1| 248|Caenorhabditis elegans Hypothetical ... 71 6e-13
U97550-1|AAK18983.2| 1065|Caenorhabditis elegans Hypothetical pr... 30 1.3
U29244-10|AAC71091.2| 908|Caenorhabditis elegans Hypothetical p... 29 2.2
Z77133-7|CAB00865.2| 735|Caenorhabditis elegans Hypothetical pr... 29 2.9
U28738-7|AAA68312.1| 341|Caenorhabditis elegans Hypothetical pr... 29 2.9
U28738-5|AAT92055.1| 342|Caenorhabditis elegans Hypothetical pr... 29 2.9
U28409-2|AAN60501.1| 288|Caenorhabditis elegans Hypothetical pr... 29 2.9
AL008868-4|CAO82021.1| 735|Caenorhabditis elegans Hypothetical ... 29 2.9
U50193-7|AAL11479.1| 327|Caenorhabditis elegans T box family pr... 27 6.8
Z81466-2|CAC42256.1| 954|Caenorhabditis elegans Hypothetical pr... 27 9.0
Z81449-11|CAD44106.2| 410|Caenorhabditis elegans Hypothetical p... 27 9.0
Z81449-10|CAB03766.4| 419|Caenorhabditis elegans Hypothetical p... 27 9.0
Z66567-4|CAA91493.2| 618|Caenorhabditis elegans Hypothetical pr... 27 9.0
Z48241-6|CAD44100.2| 410|Caenorhabditis elegans Hypothetical pr... 27 9.0
Z48241-5|CAA88286.4| 419|Caenorhabditis elegans Hypothetical pr... 27 9.0
U80843-1|AAB37966.1| 410|Caenorhabditis elegans Hypothetical pr... 27 9.0
U39674-1|AAA80413.2| 137|Caenorhabditis elegans Hypothetical pr... 27 9.0
U11029-2|AAA19242.2| 432|Caenorhabditis elegans Cam kinase kina... 27 9.0
U11029-1|AAZ82849.1| 512|Caenorhabditis elegans Cam kinase kina... 27 9.0
AJ133374-1|CAB40208.1| 954|Caenorhabditis elegans lin-10 protei... 27 9.0
AC024759-5|AAK68432.1| 419|Caenorhabditis elegans Hypothetical ... 27 9.0
AB016838-1|BAA77824.4| 432|Caenorhabditis elegans Ca2+/calmodul... 27 9.0
>AL161712-6|CAC70141.1| 248|Caenorhabditis elegans Hypothetical
protein Y66D12A.9 protein.
Length = 248
Score = 70.9 bits (166), Expect = 6e-13
Identities = 39/117 (33%), Positives = 67/117 (57%), Gaps = 4/117 (3%)
Frame = +2
Query: 209 DYKDSLKLKAEHLIIKGFPEKIVKLNELLETSNFQNRNLSDVHQD--LNIPIPTP--PAT 376
+YK L +AE L+ + FP+K+++ + LL++ L+++ D LNIPIP T
Sbjct: 15 EYKQKLFAEAERLVKEEFPKKVIEFDALLKSPKLSYDRLAEILPDKSLNIPIPDALNGTT 74
Query: 377 SNNEPNAKRQRLDSSELSSNSTIEGTRVYVLPNGSVPCNKPLSDLIHLVKPHIXELV 547
++EP KRQR+D +G ++ +G+VPCN+ L+ L+ LV+P + + V
Sbjct: 75 DSDEPAVKRQRVDEKP-------KGAPIFAFSSGTVPCNENLAQLMDLVRPKLRDAV 124
>U97550-1|AAK18983.2| 1065|Caenorhabditis elegans Hypothetical
protein T20F7.5 protein.
Length = 1065
Score = 29.9 bits (64), Expect = 1.3
Identities = 13/47 (27%), Positives = 22/47 (46%)
Frame = +2
Query: 299 TSNFQNRNLSDVHQDLNIPIPTPPATSNNEPNAKRQRLDSSELSSNS 439
T+N + + P+PTPP T+ +E + D + L+ NS
Sbjct: 492 TANQTGSTDGTITSGIQSPVPTPPVTNEHESQRSSRLSDFTNLAGNS 538
>U29244-10|AAC71091.2| 908|Caenorhabditis elegans Hypothetical
protein ZK1248.10 protein.
Length = 908
Score = 29.1 bits (62), Expect = 2.2
Identities = 16/55 (29%), Positives = 27/55 (49%)
Frame = +2
Query: 278 KLNELLETSNFQNRNLSDVHQDLNIPIPTPPATSNNEPNAKRQRLDSSELSSNST 442
K + L+ S+ RN S V ++ + P P PP S +P + Q L E + ++
Sbjct: 123 KSDSSLDISSLTGRNSSSVLEECSSPSPVPPPRS-PKPKKRTQFLTEEETDAETS 176
>Z77133-7|CAB00865.2| 735|Caenorhabditis elegans Hypothetical
protein K03A11.1 protein.
Length = 735
Score = 28.7 bits (61), Expect = 2.9
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +2
Query: 311 QNRNLSDVHQDLNIPIPTPPATSNNEPN 394
QN N+S+VH ++I PT NN N
Sbjct: 124 QNMNISNVHNGVHISTPTENLAENNANN 151
>U28738-7|AAA68312.1| 341|Caenorhabditis elegans Hypothetical
protein T28D9.3a protein.
Length = 341
Score = 28.7 bits (61), Expect = 2.9
Identities = 17/49 (34%), Positives = 25/49 (51%)
Frame = +2
Query: 299 TSNFQNRNLSDVHQDLNIPIPTPPATSNNEPNAKRQRLDSSELSSNSTI 445
T F N + Q L +P PP T N + +R RLD+ S++S+I
Sbjct: 274 TDLFSNNSTESETQPLLLP--RPPRTPRNSEDEERHRLDAVLPSTDSSI 320
>U28738-5|AAT92055.1| 342|Caenorhabditis elegans Hypothetical
protein T28D9.3b protein.
Length = 342
Score = 28.7 bits (61), Expect = 2.9
Identities = 17/49 (34%), Positives = 25/49 (51%)
Frame = +2
Query: 299 TSNFQNRNLSDVHQDLNIPIPTPPATSNNEPNAKRQRLDSSELSSNSTI 445
T F N + Q L +P PP T N + +R RLD+ S++S+I
Sbjct: 275 TDLFSNNSTESETQPLLLP--RPPRTPRNSEDEERHRLDAVLPSTDSSI 321
>U28409-2|AAN60501.1| 288|Caenorhabditis elegans Hypothetical
protein T25D10.5 protein.
Length = 288
Score = 28.7 bits (61), Expect = 2.9
Identities = 15/39 (38%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = -3
Query: 426 NSDESSL*RLAFGSLFDV-AGGVGIGMFKS*CTSDKFRF 313
NSD+ S+ + G D GG+ + +F S TS+K+RF
Sbjct: 9 NSDKYSI-KSVLGKFCDTNCGGINVSLFVSETTSNKYRF 46
>AL008868-4|CAO82021.1| 735|Caenorhabditis elegans Hypothetical
protein K03A11.1 protein.
Length = 735
Score = 28.7 bits (61), Expect = 2.9
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +2
Query: 311 QNRNLSDVHQDLNIPIPTPPATSNNEPN 394
QN N+S+VH ++I PT NN N
Sbjct: 124 QNMNISNVHNGVHISTPTENLAENNANN 151
>U50193-7|AAL11479.1| 327|Caenorhabditis elegans T box family
protein 7 protein.
Length = 327
Score = 27.5 bits (58), Expect = 6.8
Identities = 13/32 (40%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = +2
Query: 317 RNLSDVHQ-DLNIPIPTPPATSNNEPNAKRQR 409
RN+ V + +N I TPPA+ + EP KR +
Sbjct: 237 RNIDTVRKRKMNQIISTPPASEDEEPEVKRTK 268
>Z81466-2|CAC42256.1| 954|Caenorhabditis elegans Hypothetical
protein C09H6.2b protein.
Length = 954
Score = 27.1 bits (57), Expect = 9.0
Identities = 17/52 (32%), Positives = 24/52 (46%), Gaps = 1/52 (1%)
Frame = +2
Query: 299 TSNFQNRNLSDVHQDLNIPIPTPPATSNNEPNAKRQRLDSS-ELSSNSTIEG 451
T QN+N+ L+ P PP+T + P +L SS L +ST G
Sbjct: 242 TRRSQNKNIKT--SGLSYTAPAPPSTEKSAPKESLNQLRSSFNLPDDSTTVG 291
>Z81449-11|CAD44106.2| 410|Caenorhabditis elegans Hypothetical
protein C32A3.3b protein.
Length = 410
Score = 27.1 bits (57), Expect = 9.0
Identities = 23/82 (28%), Positives = 39/82 (47%), Gaps = 1/82 (1%)
Frame = +2
Query: 206 QDYKDSLKLKAE-HLIIKGFPEKIVKLNELLETSNFQNRNLSDVHQDLNIPIPTPPATSN 382
Q + LK + E + K + + I L +++++ +NRNLS L +P +TS
Sbjct: 78 QRNQQHLKFEEELEQVEKTYRKDIDDLQQMVKSLVNENRNLSTTVSSLPNHADSPVSTSM 137
Query: 383 NEPNAKRQRLDSSELSSNSTIE 448
E + K L+ E+SS E
Sbjct: 138 READLK-MLLELKEMSSQQKDE 158
>Z81449-10|CAB03766.4| 419|Caenorhabditis elegans Hypothetical
protein C32A3.3a protein.
Length = 419
Score = 27.1 bits (57), Expect = 9.0
Identities = 23/82 (28%), Positives = 39/82 (47%), Gaps = 1/82 (1%)
Frame = +2
Query: 206 QDYKDSLKLKAE-HLIIKGFPEKIVKLNELLETSNFQNRNLSDVHQDLNIPIPTPPATSN 382
Q + LK + E + K + + I L +++++ +NRNLS L +P +TS
Sbjct: 87 QRNQQHLKFEEELEQVEKTYRKDIDDLQQMVKSLVNENRNLSTTVSSLPNHADSPVSTSM 146
Query: 383 NEPNAKRQRLDSSELSSNSTIE 448
E + K L+ E+SS E
Sbjct: 147 READLK-MLLELKEMSSQQKDE 167
>Z66567-4|CAA91493.2| 618|Caenorhabditis elegans Hypothetical
protein ZK455.4 protein.
Length = 618
Score = 27.1 bits (57), Expect = 9.0
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +2
Query: 434 NSTIEGTRVYVLPNGSVPCNKPLSDLIHLVKPHI 535
N TI G + + P +P NKP ++HL HI
Sbjct: 159 NITIPGGKPPIKPWPKIPDNKPTFKVLHLSDIHI 192
>Z48241-6|CAD44100.2| 410|Caenorhabditis elegans Hypothetical
protein C32A3.3b protein.
Length = 410
Score = 27.1 bits (57), Expect = 9.0
Identities = 23/82 (28%), Positives = 39/82 (47%), Gaps = 1/82 (1%)
Frame = +2
Query: 206 QDYKDSLKLKAE-HLIIKGFPEKIVKLNELLETSNFQNRNLSDVHQDLNIPIPTPPATSN 382
Q + LK + E + K + + I L +++++ +NRNLS L +P +TS
Sbjct: 78 QRNQQHLKFEEELEQVEKTYRKDIDDLQQMVKSLVNENRNLSTTVSSLPNHADSPVSTSM 137
Query: 383 NEPNAKRQRLDSSELSSNSTIE 448
E + K L+ E+SS E
Sbjct: 138 READLK-MLLELKEMSSQQKDE 158
>Z48241-5|CAA88286.4| 419|Caenorhabditis elegans Hypothetical
protein C32A3.3a protein.
Length = 419
Score = 27.1 bits (57), Expect = 9.0
Identities = 23/82 (28%), Positives = 39/82 (47%), Gaps = 1/82 (1%)
Frame = +2
Query: 206 QDYKDSLKLKAE-HLIIKGFPEKIVKLNELLETSNFQNRNLSDVHQDLNIPIPTPPATSN 382
Q + LK + E + K + + I L +++++ +NRNLS L +P +TS
Sbjct: 87 QRNQQHLKFEEELEQVEKTYRKDIDDLQQMVKSLVNENRNLSTTVSSLPNHADSPVSTSM 146
Query: 383 NEPNAKRQRLDSSELSSNSTIE 448
E + K L+ E+SS E
Sbjct: 147 READLK-MLLELKEMSSQQKDE 167
>U80843-1|AAB37966.1| 410|Caenorhabditis elegans Hypothetical
protein C32B5.10 protein.
Length = 410
Score = 27.1 bits (57), Expect = 9.0
Identities = 24/83 (28%), Positives = 37/83 (44%), Gaps = 2/83 (2%)
Frame = +2
Query: 221 SLKLKAEHLIIKGFP-EKI-VKLNELLETSNFQNRNLSDVHQDLNIPIPTPPATSNNEPN 394
SL LK HL I G +KI + LLE S+ Q+ L++ N + T P PN
Sbjct: 234 SLNLKVTHLEILGSGVDKIAISFQPLLEGSSLQSIKLNNDFNIENPILQTSPLLIFKNPN 293
Query: 395 AKRQRLDSSELSSNSTIEGTRVY 463
R S+ + +E + ++
Sbjct: 294 ENLFRARSAFTNVRVELEKSTIF 316
>U39674-1|AAA80413.2| 137|Caenorhabditis elegans Hypothetical
protein C06E2.5 protein.
Length = 137
Score = 27.1 bits (57), Expect = 9.0
Identities = 14/40 (35%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Frame = +2
Query: 359 PTPPATSNNEPNAKRQRLDSSELSSNSTIE-GTRVYVLPN 475
P+ + EP AKR R D+ E + +T E R + +PN
Sbjct: 81 PSNAVGATEEPAAKRARTDTPEPNKENTTEVPRRTFKIPN 120
>U11029-2|AAA19242.2| 432|Caenorhabditis elegans Cam kinase kinase
protein 1, isoforma protein.
Length = 432
Score = 27.1 bits (57), Expect = 9.0
Identities = 16/42 (38%), Positives = 25/42 (59%), Gaps = 2/42 (4%)
Frame = +2
Query: 284 NELLETSNFQNRNLSDVHQDLN-IPIP-TPPATSNNEPNAKR 403
N+L S+ ++R S +D +P P +PPATSNN N+ +
Sbjct: 358 NKLSAQSSIRDRRKSSSVKDPTYVPPPNSPPATSNNNLNSTK 399
>U11029-1|AAZ82849.1| 512|Caenorhabditis elegans Cam kinase kinase
protein 1, isoformb protein.
Length = 512
Score = 27.1 bits (57), Expect = 9.0
Identities = 16/42 (38%), Positives = 25/42 (59%), Gaps = 2/42 (4%)
Frame = +2
Query: 284 NELLETSNFQNRNLSDVHQDLN-IPIP-TPPATSNNEPNAKR 403
N+L S+ ++R S +D +P P +PPATSNN N+ +
Sbjct: 438 NKLSAQSSIRDRRKSSSVKDPTYVPPPNSPPATSNNNLNSTK 479
>AJ133374-1|CAB40208.1| 954|Caenorhabditis elegans lin-10 protein
protein.
Length = 954
Score = 27.1 bits (57), Expect = 9.0
Identities = 17/52 (32%), Positives = 24/52 (46%), Gaps = 1/52 (1%)
Frame = +2
Query: 299 TSNFQNRNLSDVHQDLNIPIPTPPATSNNEPNAKRQRLDSS-ELSSNSTIEG 451
T QN+N+ L+ P PP+T + P +L SS L +ST G
Sbjct: 242 TRRSQNKNIKT--SGLSYTAPAPPSTEKSAPKESLNQLRSSFNLPDDSTTVG 291
>AC024759-5|AAK68432.1| 419|Caenorhabditis elegans Hypothetical
protein Y37E11AR.2 protein.
Length = 419
Score = 27.1 bits (57), Expect = 9.0
Identities = 29/90 (32%), Positives = 41/90 (45%), Gaps = 10/90 (11%)
Frame = +2
Query: 296 ETSNFQNRNLSDVHQDLNIPIPTPPATSNNEPN-AKRQRLDSSELSSNSTIEGT------ 454
+TSN ++ + H + N P P PP + + R+ +S S+ STI GT
Sbjct: 48 QTSNSLVEDMVN-HSNGNPP-PVPPGITQQQCQIGLTPRMSASPPSAVSTISGTAVLGKT 105
Query: 455 --RVYVLPNGSVPCN-KPLSDLIHLVKPHI 535
RV P GS+P N + I V PHI
Sbjct: 106 MARVQSNPPGSIPHNTTTTAQGIQSVAPHI 135
>AB016838-1|BAA77824.4| 432|Caenorhabditis elegans
Ca2+/calmodulin-dependent proteinkinase kinase protein.
Length = 432
Score = 27.1 bits (57), Expect = 9.0
Identities = 16/42 (38%), Positives = 25/42 (59%), Gaps = 2/42 (4%)
Frame = +2
Query: 284 NELLETSNFQNRNLSDVHQDLN-IPIP-TPPATSNNEPNAKR 403
N+L S+ ++R S +D +P P +PPATSNN N+ +
Sbjct: 358 NKLSAQSSIRDRRKSSSVKDPTYVPPPNSPPATSNNNLNSTK 399
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,298,395
Number of Sequences: 27780
Number of extensions: 247294
Number of successful extensions: 821
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 779
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 819
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1123720628
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -