Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP13_F_E07
(522 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_02_1614 - 28243532-28244589,28245149-28245383,28245524-282457... 109 1e-24
09_06_0365 - 22582467-22583524,22584407-22584641,22585474-225856... 105 2e-23
03_04_0206 - 18493178-18495310 66 1e-11
02_05_1297 - 35536193-35536312,35536405-35536467,35536610-355369... 58 4e-09
04_04_1439 + 33614112-33614123,33614278-33615649,33615705-33616141 45 3e-05
04_01_0568 - 7279478-7279590,7279749-7279988,7280078-7280141,728... 38 0.006
01_06_0555 - 30182818-30183169,30183268-30183674,30183804-301847... 35 0.034
08_02_1616 + 28260204-28262555 34 0.060
11_06_0325 + 22376195-22377001,22377136-22377525,22377638-223777... 33 0.18
06_03_1249 - 28688997-28689248,28689469-28689533,28690016-286900... 31 0.56
06_01_0591 + 4261483-4261631,4261837-4262007,4262127-4262226,426... 31 0.56
08_01_0344 + 3043824-3044123,3044260-3044314,3044810-3044985,304... 31 0.74
08_01_0345 + 3055522-3055827,3055968-3056022,3056744-3056919,305... 30 0.98
01_06_0857 - 32507119-32507328,32507936-32508058,32508194-325082... 30 0.98
11_01_0800 - 7047425-7048253,7048340-7048927,7049050-7049268,704... 30 1.3
05_07_0003 + 26981956-26982190,26982258-26982318,26982739-269828... 30 1.3
07_03_0293 + 16321539-16321893,16322020-16322207,16322881-163229... 29 1.7
07_03_1700 - 28810239-28810870,28811304-28812594 28 5.2
11_08_0079 + 28189782-28189907,28190445-28190553,28190876-281909... 27 6.9
11_01_0202 + 1606317-1606487,1606743-1606805,1607045-1607116,160... 27 9.1
08_02_1457 + 27260841-27260965,27261126-27261246,27263455-272635... 27 9.1
08_02_0581 + 18986084-18986176,18986284-18986668,18986779-189868... 27 9.1
02_05_1329 - 35724567-35725255,35725626-35725682,35727667-35729050 27 9.1
>08_02_1614 -
28243532-28244589,28245149-28245383,28245524-28245734,
28245834-28245907,28246465-28246665
Length = 592
Score = 109 bits (263), Expect = 1e-24
Identities = 49/78 (62%), Positives = 62/78 (79%)
Frame = +3
Query: 276 RSCTGSLAVHPRSRDIKIANFSITFYGSELLQDTLLELNCGRXYGLXGLNGCGKSSLLAX 455
R+CTG LA HP SRDI I + S+TF+G +L+ D+ LELN GR YGL GLNGCGKS+LL
Sbjct: 51 RTCTGVLASHPLSRDIHIESLSLTFHGHDLIVDSELELNYGRRYGLLGLNGCGKSTLLTA 110
Query: 456 LXRREVPIPEHIDIFHLT 509
+ RE+PIPEH+DI+HL+
Sbjct: 111 IGCRELPIPEHMDIYHLS 128
>09_06_0365 -
22582467-22583524,22584407-22584641,22585474-22585684,
22585775-22585848,22585943-22586092
Length = 575
Score = 105 bits (253), Expect = 2e-23
Identities = 49/78 (62%), Positives = 58/78 (74%)
Frame = +3
Query: 276 RSCTGSLAVHPRSRDIKIANFSITFYGSELLQDTLLELNCGRXYGLXGLNGCGKSSLLAX 455
R+CT L HP SRDI I + S+TF+G +LL DT LELN GR YGL GLNGCGKS LL
Sbjct: 34 RTCTAVLTSHPLSRDIHIESLSLTFHGHDLLLDTDLELNYGRRYGLLGLNGCGKSCLLKA 93
Query: 456 LXRREVPIPEHIDIFHLT 509
+ RE+PIP H+DI+HLT
Sbjct: 94 IGCRELPIPPHMDIYHLT 111
>03_04_0206 - 18493178-18495310
Length = 710
Score = 66.5 bits (155), Expect = 1e-11
Identities = 32/69 (46%), Positives = 44/69 (63%)
Frame = +3
Query: 291 SLAVHPRSRDIKIANFSITFYGSELLQDTLLELNCGRXYGLXGLNGCGKSSLLAXLXRRE 470
S A +DI + NFS++ G ELL++ L ++ GR YGL G NG GKS+LL L R+
Sbjct: 148 SAAADDNIKDIVLENFSVSARGKELLKNASLRISHGRRYGLVGPNGMGKSTLLKLLSWRQ 207
Query: 471 VPIPEHIDI 497
VP+P ID+
Sbjct: 208 VPVPRSIDV 216
>02_05_1297 -
35536193-35536312,35536405-35536467,35536610-35536942,
35537098-35537184,35538337-35538399,35538604-35538750,
35538900-35539001,35539069-35539197,35539506-35539664,
35539726-35539967,35540317-35540506,35540692-35540907,
35541536-35541760
Length = 691
Score = 58.0 bits (134), Expect = 4e-09
Identities = 29/68 (42%), Positives = 40/68 (58%), Gaps = 1/68 (1%)
Frame = +3
Query: 306 PRSRDIKIANFSITFYGSELLQDTLLELNCGRXYGLXGLNGCGKSSLLAXLXRREVP-IP 482
P RDI + NFS+T G +L+QD + L GR YGL G NG GK+S L + + IP
Sbjct: 177 PAVRDIHMENFSVTVGGRDLIQDCTVTLAFGRHYGLVGRNGTGKTSFLRAMAMHAIDGIP 236
Query: 483 EHIDIFHL 506
++ I H+
Sbjct: 237 KNCQILHV 244
>04_04_1439 + 33614112-33614123,33614278-33615649,33615705-33616141
Length = 606
Score = 45.2 bits (102), Expect = 3e-05
Identities = 22/61 (36%), Positives = 34/61 (55%)
Frame = +3
Query: 315 RDIKIANFSITFYGSELLQDTLLELNCGRXYGLXGLNGCGKSSLLAXLXRREVPIPEHID 494
RD+ + + + G L + L + GR YGL G NG GK++LL L R++P+P I
Sbjct: 87 RDVVVEDSDVWVQGVALFEGASLRVAHGRRYGLVGPNGKGKTTLLKLLHWRKLPVPRGIR 146
Query: 495 I 497
+
Sbjct: 147 V 147
>04_01_0568 - 7279478-7279590,7279749-7279988,7280078-7280141,
7280242-7280547,7280643-7280857,7281395-7281689,
7281906-7281983,7282070-7282705,7283016-7283102,
7283945-7284265,7285503-7287599
Length = 1483
Score = 37.5 bits (83), Expect = 0.006
Identities = 19/64 (29%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Frame = +3
Query: 306 PRSRDIKIANFSITFYGSE--LLQDTLLELNCGRXYGLXGLNGCGKSSLLAXLXRREVPI 479
PR DI + + + + + +L+ + +N G G+ G G GKS+L+ L R P+
Sbjct: 1232 PRRGDIDVKDLKVRYRSNTPLILKGITISINSGEKIGVVGRTGSGKSTLVQALFRLVEPV 1291
Query: 480 PEHI 491
HI
Sbjct: 1292 EGHI 1295
>01_06_0555 - 30182818-30183169,30183268-30183674,30183804-30184773,
30184829-30184902,30184941-30185084,30185186-30185365,
30185448-30185988,30186081-30186538,30187723-30187901,
30187998-30188052,30188217-30188468
Length = 1203
Score = 35.1 bits (77), Expect = 0.034
Identities = 14/34 (41%), Positives = 22/34 (64%)
Frame = +3
Query: 363 LLQDTLLELNCGRXYGLXGLNGCGKSSLLAXLXR 464
+LQD L++ G GL G +GCGKS+++ + R
Sbjct: 982 ILQDFSLDVKAGTSIGLVGRSGCGKSTIIGLIQR 1015
>08_02_1616 + 28260204-28262555
Length = 783
Score = 34.3 bits (75), Expect = 0.060
Identities = 15/35 (42%), Positives = 21/35 (60%)
Frame = +3
Query: 360 ELLQDTLLELNCGRXYGLXGLNGCGKSSLLAXLXR 464
++ +D L GR L G +GCGKSS+LA + R
Sbjct: 539 QVFRDLSLRARAGRTLALVGASGCGKSSVLALVQR 573
>11_06_0325 +
22376195-22377001,22377136-22377525,22377638-22377778,
22377888-22378067,22378268-22378447,22378536-22378637,
22378768-22378896,22379318-22379422,22379528-22379623
Length = 709
Score = 32.7 bits (71), Expect = 0.18
Identities = 15/52 (28%), Positives = 28/52 (53%)
Frame = +3
Query: 321 IKIANFSITFYGSELLQDTLLELNCGRXYGLXGLNGCGKSSLLAXLXRREVP 476
+++ + ++ G +L+D E+ G GL G+NG GK++ L + E P
Sbjct: 91 VRLEGIAKSYKGVTVLRDVSWEVQRGEKVGLVGVNGAGKTTQLRIIAGLEDP 142
Score = 30.3 bits (65), Expect = 0.98
Identities = 16/50 (32%), Positives = 23/50 (46%)
Frame = +3
Query: 321 IKIANFSITFYGSELLQDTLLELNCGRXYGLXGLNGCGKSSLLAXLXRRE 470
+ I N F +L + L + G + G NGCGKS+LL + E
Sbjct: 434 LTIRNLEFGFGEEKLFNNANLIVERGEKIAIIGPNGCGKSTLLKLILGME 483
>06_03_1249 -
28688997-28689248,28689469-28689533,28690016-28690093,
28691480-28691824,28693314-28693510,28695601-28696601
Length = 645
Score = 31.1 bits (67), Expect = 0.56
Identities = 17/43 (39%), Positives = 24/43 (55%)
Frame = +3
Query: 354 GSELLQDTLLELNCGRXYGLXGLNGCGKSSLLAXLXRREVPIP 482
G E+L+ L++ G G+ G +G GKS+LL L R P P
Sbjct: 439 GEEILRGVDLDVPRGVVVGVIGPSGSGKSTLLRALNRLWEPAP 481
>06_01_0591 +
4261483-4261631,4261837-4262007,4262127-4262226,
4263151-4263315,4263416-4263544,4263758-4263858,
4264527-4264596,4265080-4265331,4265828-4265897,
4266281-4266341,4266916-4267003,4267746-4267830,
4268168-4268234,4268442-4268559,4268843-4268923,
4269022-4269267,4269670-4269771,4269847-4269914,
4270040-4270171,4270283-4270430,4270504-4270790,
4270920-4271067,4271156-4271331,4271407-4271518,
4271614-4271667,4273134-4273244,4273317-4273478,
4273627-4273814,4273948-4274137,4274297-4274464,
4274832-4274912
Length = 1359
Score = 31.1 bits (67), Expect = 0.56
Identities = 16/31 (51%), Positives = 19/31 (61%)
Frame = +3
Query: 357 SELLQDTLLELNCGRXYGLXGLNGCGKSSLL 449
S +L+D LEL G + G GCGKSSLL
Sbjct: 630 SMILRDVSLELQKGIFVAIIGEVGCGKSSLL 660
Score = 27.1 bits (57), Expect = 9.1
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = +3
Query: 366 LQDTLLELNCGRXYGLXGLNGCGKSSLLAXLXR 464
L D ++ G G+ G G GKSS+L L R
Sbjct: 1139 LNDVSFFISSGMQVGIIGRTGAGKSSILNALLR 1171
>08_01_0344 +
3043824-3044123,3044260-3044314,3044810-3044985,
3045083-3045283,3045383-3045642,3045909-3046222,
3046399-3046622,3047046-3047398,3047709-3047826,
3047875-3048133,3048252-3049729
Length = 1245
Score = 30.7 bits (66), Expect = 0.74
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = +3
Query: 363 LLQDTLLELNCGRXYGLXGLNGCGKSSLLAXLXR 464
+LQ L + G+ L G +GCGKS++++ L R
Sbjct: 396 ILQGFSLSIPAGKVVALVGSSGCGKSTVISLLQR 429
>08_01_0345 +
3055522-3055827,3055968-3056022,3056744-3056919,
3057104-3057232,3057313-3057572,3057688-3058001,
3058268-3058491,3058862-3059214,3059489-3059916,
3060031-3061514
Length = 1242
Score = 30.3 bits (65), Expect = 0.98
Identities = 14/43 (32%), Positives = 25/43 (58%)
Frame = +3
Query: 363 LLQDTLLELNCGRXYGLXGLNGCGKSSLLAXLXRREVPIPEHI 491
+L+ L + G+ L G +GCGKS++++ + R PI +I
Sbjct: 374 ILRSFSLSIPAGKVVALVGSSGCGKSTVISLVQRFYDPISGNI 416
>01_06_0857 -
32507119-32507328,32507936-32508058,32508194-32508262,
32509963-32510238
Length = 225
Score = 30.3 bits (65), Expect = 0.98
Identities = 14/29 (48%), Positives = 20/29 (68%)
Frame = +3
Query: 363 LLQDTLLELNCGRXYGLXGLNGCGKSSLL 449
+L+D L + G+ + L G NGCGKS+LL
Sbjct: 63 VLKDCSLRVPPGQLWMLLGPNGCGKSTLL 91
>11_01_0800 -
7047425-7048253,7048340-7048927,7049050-7049268,
7049398-7049518,7050593-7050983
Length = 715
Score = 29.9 bits (64), Expect = 1.3
Identities = 15/42 (35%), Positives = 22/42 (52%), Gaps = 3/42 (7%)
Frame = -2
Query: 239 KAQCLFCRQLTVXPWIYH*F---RYHFRLRSSHEPPASCFCR 123
+A+ ++C TV W H RYHF +R+ +E S CR
Sbjct: 118 RARRVYCEHCTVAGWSKHPVCSKRYHFIIRNENETGTSKTCR 159
>05_07_0003 + 26981956-26982190,26982258-26982318,26982739-26982833,
26983304-26983479,26983738-26983959,26984041-26984279,
26984786-26985311,26985407-26985680,26985759-26986410,
26986508-26986736,26986841-26987107,26987180-26987443,
26987526-26988194
Length = 1302
Score = 29.9 bits (64), Expect = 1.3
Identities = 12/35 (34%), Positives = 22/35 (62%)
Frame = +3
Query: 360 ELLQDTLLELNCGRXYGLXGLNGCGKSSLLAXLXR 464
++ ++ L + G+ L G +GCGKS+++A L R
Sbjct: 1067 QIFRNLSLRIPSGKMVALVGESGCGKSTVIALLER 1101
>07_03_0293 +
16321539-16321893,16322020-16322207,16322881-16322904,
16323497-16323550,16323854-16323944,16324715-16324815,
16324949-16324999,16326626-16326754,16327772-16327834,
16327928-16328171,16329628-16329776,16329855-16329944,
16330343-16330477,16330579-16330635,16331079-16331135,
16332299-16332336,16332532-16332601,16332971-16333207
Length = 710
Score = 29.5 bits (63), Expect = 1.7
Identities = 15/46 (32%), Positives = 23/46 (50%)
Frame = +3
Query: 360 ELLQDTLLELNCGRXYGLXGLNGCGKSSLLAXLXRREVPIPEHIDI 497
E+L L + CG+ L G +G GKS+++ L R P I +
Sbjct: 446 EILNGLDLTIECGKITALVGPSGAGKSTVVQLLARYYEPTHGRITV 491
>07_03_1700 - 28810239-28810870,28811304-28812594
Length = 640
Score = 27.9 bits (59), Expect = 5.2
Identities = 12/44 (27%), Positives = 23/44 (52%)
Frame = -3
Query: 340 EKLAILISLERGCTASDPVQERASEFIFASASSLRHNASSAVSS 209
E+L ++ + CT+ P + + E + LRH+AS + +S
Sbjct: 584 EELVQMLQIAMACTSRSPDRRPSMEDVIRMIEGLRHSASESRAS 627
>11_08_0079 +
28189782-28189907,28190445-28190553,28190876-28190958,
28191500-28191562,28191658-28192854,28193247-28193310,
28193338-28193426,28194404-28194463,28195442-28195547,
28196057-28196069,28196940-28197111
Length = 693
Score = 27.5 bits (58), Expect = 6.9
Identities = 18/58 (31%), Positives = 30/58 (51%)
Frame = +3
Query: 315 RDIKIANFSITFYGSELLQDTLLELNCGRXYGLXGLNGCGKSSLLAXLXRREVPIPEH 488
++ ++A+ S G+E +LEL GL G+ GKS+LL+ L R I ++
Sbjct: 314 KEEEMASLSTGHPGTETY--LILELKSIADVGLVGMPNAGKSTLLSALSRARPEIADY 369
>11_01_0202 +
1606317-1606487,1606743-1606805,1607045-1607116,
1607244-1607351,1607497-1607538,1607965-1608018,
1608130-1608255,1608338-1608427,1608735-1608857,
1608963-1609070,1609412-1609573,1609655-1609711,
1609792-1609884
Length = 422
Score = 27.1 bits (57), Expect = 9.1
Identities = 9/28 (32%), Positives = 17/28 (60%)
Frame = +3
Query: 315 RDIKIANFSITFYGSELLQDTLLELNCG 398
RD+K+++F ++ ++ D LL CG
Sbjct: 135 RDLKVSDFGLSALSQQIKDDGLLHTTCG 162
>08_02_1457 +
27260841-27260965,27261126-27261246,27263455-27263543,
27263776-27263860,27263970-27264074,27264446-27264527,
27264573-27264686,27265029-27265330,27265519-27266114,
27266216-27266376,27266489-27266592,27266697-27266856,
27266942-27267105,27267213-27267545,27267640-27267930,
27268276-27268359,27268430-27268563,27268665-27268892,
27268993-27269164,27269263-27269517,27269778-27270047
Length = 1324
Score = 27.1 bits (57), Expect = 9.1
Identities = 15/49 (30%), Positives = 24/49 (48%)
Frame = +3
Query: 324 KIANFSITFYGSELLQDTLLELNCGRXYGLXGLNGCGKSSLLAXLXRRE 470
++ + +T +LLQD G L G+ G GK++LL L R+
Sbjct: 737 EMTKYGVTDKKLQLLQDVSGAFRPGVLTALMGITGAGKTTLLDVLAGRK 785
>08_02_0581 +
18986084-18986176,18986284-18986668,18986779-18986861,
18986966-18987110,18987823-18987951,18988047-18988171,
18988261-18988419,18988503-18988665,18988750-18988875,
18989110-18989471,18989572-18989772,18989873-18989982,
18990079-18990163,18990298-18990426,18990505-18990610,
18990688-18990776,18990885-18991184
Length = 929
Score = 27.1 bits (57), Expect = 9.1
Identities = 20/71 (28%), Positives = 33/71 (46%), Gaps = 7/71 (9%)
Frame = +3
Query: 267 SEARSCTGSLAVHPR-SRDIKIANFSITFYGSELLQDTL------LELNCGRXYGLXGLN 425
S+ R L + P S+ I N ++G + D L L L G+ +G+ G N
Sbjct: 588 SQEREVVEQLLLEPNASQAIICDNLKKVYHGKDGNPDKLAVRGLSLALPKGQCFGMLGPN 647
Query: 426 GCGKSSLLAXL 458
G GK+S ++ +
Sbjct: 648 GAGKTSFISMM 658
>02_05_1329 - 35724567-35725255,35725626-35725682,35727667-35729050
Length = 709
Score = 27.1 bits (57), Expect = 9.1
Identities = 13/44 (29%), Positives = 20/44 (45%)
Frame = -3
Query: 340 EKLAILISLERGCTASDPVQERASEFIFASASSLRHNASSAVSS 209
EKL LIS+ C +DP + + + R A S+ +S
Sbjct: 635 EKLGALISIAAACVVADPARRPTTPEVLRMVREARAEAMSSSNS 678
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,774,659
Number of Sequences: 37544
Number of extensions: 192838
Number of successful extensions: 419
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 404
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 419
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1142636160
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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