Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP13_F_D23
         (379 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_01_0479 + 3671792-3671844,3671950-3675691,3675815-3675895,367...    27   4.9  
07_01_0024 + 159839-159923,160395-160442,160884-160895,161347-16...    27   6.5  
04_04_0584 + 26381220-26381232,26381583-26381594,26381921-263820...    27   6.5  
04_03_0363 - 14942195-14942203,14942421-14943417,14944178-14944278     27   6.5  
01_07_0302 - 42611150-42611812,42611881-42611961,42612064-426121...    27   6.5  
01_07_0167 - 41613834-41613842,41614060-41615056,41615456-416163...    27   6.5  
04_03_0645 + 18351034-18353299,18353707-18354203,18354633-18354680     26   8.6  

>03_01_0479 + 3671792-3671844,3671950-3675691,3675815-3675895,
            3675973-3676042,3676157-3676224
          Length = 1337

 Score = 27.1 bits (57), Expect = 4.9
 Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
 Frame = -2

Query: 321  STHLLNTN*IIFYYFNYPG*LPSHSLHKDYQ*ASY-PSGTTHD 196
            ST L+  N +IFY F     L  H+L KD +   + P  TT+D
Sbjct: 949  STELILYNILIFYLFRRRHILQVHNLLKDMKSNGFSPDTTTYD 991


>07_01_0024 +
           159839-159923,160395-160442,160884-160895,161347-161427,
           161530-161675,161918-161965,162054-162203,165647-165706,
           165788-165859,165960-166409,166640-166839,167239-168236,
           168676-168683,169057-169230,169341-169659,169748-169824,
           169897-169966,170040-170111,170204-170418,170540-170665,
           170751-171046,171133-171157,171163-171303,171400-171498,
           171571-171702,171793-171912
          Length = 1407

 Score = 26.6 bits (56), Expect = 6.5
 Identities = 12/23 (52%), Positives = 16/23 (69%), Gaps = 1/23 (4%)
 Frame = -1

Query: 100 IMKKXRKNFVPHYSKFSY-PKLH 35
           IM + RKNF+P YSK  + P +H
Sbjct: 478 IMWRTRKNFIPVYSKTDFCPFIH 500


>04_04_0584 +
           26381220-26381232,26381583-26381594,26381921-26382028,
           26382137-26382217,26382320-26382465,26382550-26382624,
           26382709-26382756,26382845-26382994,26383081-26383140,
           26383394-26384274,26384674-26385670,26385887-26385895
          Length = 859

 Score = 26.6 bits (56), Expect = 6.5
 Identities = 12/23 (52%), Positives = 16/23 (69%), Gaps = 1/23 (4%)
 Frame = -1

Query: 100 IMKKXRKNFVPHYSKFSY-PKLH 35
           IM + RKNF+P YSK  + P +H
Sbjct: 552 IMWRTRKNFIPVYSKTDFCPFIH 574


>04_03_0363 - 14942195-14942203,14942421-14943417,14944178-14944278
          Length = 368

 Score = 26.6 bits (56), Expect = 6.5
 Identities = 12/23 (52%), Positives = 16/23 (69%), Gaps = 1/23 (4%)
 Frame = -1

Query: 100 IMKKXRKNFVPHYSKFSY-PKLH 35
           IM + RKNF+P YSK  + P +H
Sbjct: 61  IMWRTRKNFIPVYSKTDFCPFIH 83


>01_07_0302 -
           42611150-42611812,42611881-42611961,42612064-42612150,
           42612283-42612378,42612479-42612543,42612919-42612975,
           42613066-42613147,42613235-42613327,42613714-42613785,
           42613881-42613985
          Length = 466

 Score = 26.6 bits (56), Expect = 6.5
 Identities = 19/42 (45%), Positives = 24/42 (57%), Gaps = 3/42 (7%)
 Frame = +3

Query: 141 IHNLTLGNHY--RRSLTDRWSRALYQRDMRLTGNPY-EVNGL 257
           I NL LGN+   RRS  +  S   Y R++ L GNP  E +GL
Sbjct: 202 ILNLDLGNNLIERRSDLEVLSELHYLRNLNLQGNPIAEKDGL 243


>01_07_0167 -
           41613834-41613842,41614060-41615056,41615456-41616336,
           41616437-41616508,41616590-41616649,41616736-41616885,
           41616974-41617021,41617107-41617181,41617266-41617411,
           41617514-41617594,41617703-41617810,41618046-41618057,
           41618137-41618148,41618499-41618546,41619021-41619105
          Length = 927

 Score = 26.6 bits (56), Expect = 6.5
 Identities = 12/23 (52%), Positives = 16/23 (69%), Gaps = 1/23 (4%)
 Frame = -1

Query: 100 IMKKXRKNFVPHYSKFSY-PKLH 35
           IM + RKNF+P YSK  + P +H
Sbjct: 620 IMWRTRKNFIPVYSKTDFCPFIH 642


>04_03_0645 + 18351034-18353299,18353707-18354203,18354633-18354680
          Length = 936

 Score = 26.2 bits (55), Expect = 8.6
 Identities = 14/46 (30%), Positives = 25/46 (54%)
 Frame = +3

Query: 123 GWGLYHIHNLTLGNHYRRSLTDRWSRALYQRDMRLTGNPYEVNGLE 260
           GW ++H    TL N  + S+    +R+    ++    +PYE+NGL+
Sbjct: 342 GWRIFH---RTLSNGLQGSMILVTTRSSKVANLVSNSDPYELNGLQ 384


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,370,324
Number of Sequences: 37544
Number of extensions: 123161
Number of successful extensions: 220
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 216
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 220
length of database: 14,793,348
effective HSP length: 74
effective length of database: 12,015,092
effective search space used: 612769692
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)