Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP13_F_D23
         (379 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC115376-1|AAI15377.1|  954|Homo sapiens C2orf16 protein protein.      30   2.2  
AL834384-1|CAD39047.1|  845|Homo sapiens hypothetical protein pr...    30   2.2  
AC074091-7|AAX93198.1|  939|Homo sapiens unknown protein.              30   2.2  
U87223-1|AAB48481.1| 1384|Homo sapiens contactin associated prot...    28   8.8  

>BC115376-1|AAI15377.1|  954|Homo sapiens C2orf16 protein protein.
          Length = 954

 Score = 30.3 bits (65), Expect = 2.2
 Identities = 12/27 (44%), Positives = 19/27 (70%)
 Frame = -2

Query: 279 FNYPG*LPSHSLHKDYQ*ASYPSGTTH 199
           +++PG  PSHSL +D++  +   GTTH
Sbjct: 913 YSFPGERPSHSLSRDFKNQTTLLGTTH 939


>AL834384-1|CAD39047.1|  845|Homo sapiens hypothetical protein
           protein.
          Length = 845

 Score = 30.3 bits (65), Expect = 2.2
 Identities = 12/27 (44%), Positives = 19/27 (70%)
 Frame = -2

Query: 279 FNYPG*LPSHSLHKDYQ*ASYPSGTTH 199
           +++PG  PSHSL +D++  +   GTTH
Sbjct: 804 YSFPGERPSHSLSRDFKNQTTLLGTTH 830


>AC074091-7|AAX93198.1|  939|Homo sapiens unknown protein.
          Length = 939

 Score = 30.3 bits (65), Expect = 2.2
 Identities = 12/27 (44%), Positives = 19/27 (70%)
 Frame = -2

Query: 279 FNYPG*LPSHSLHKDYQ*ASYPSGTTH 199
           +++PG  PSHSL +D++  +   GTTH
Sbjct: 898 YSFPGERPSHSLSRDFKNQTTLLGTTH 924


>U87223-1|AAB48481.1| 1384|Homo sapiens contactin associated protein
           protein.
          Length = 1384

 Score = 28.3 bits (60), Expect = 8.8
 Identities = 16/34 (47%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
 Frame = +3

Query: 84  RXFFIITAAV-GLPGWGLYHIHNLTLGNHYRRSL 182
           R F I+ AAV G  GWG Y      +G  Y RSL
Sbjct: 5   RLFCILLAAVSGAEGWGYYGCDEELVGPLYARSL 38


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 43,025,740
Number of Sequences: 237096
Number of extensions: 753236
Number of successful extensions: 4968
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4946
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4968
length of database: 76,859,062
effective HSP length: 81
effective length of database: 57,654,286
effective search space used: 2536788584
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)