BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP13_F_D20
(422 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z19054-1|CAA79497.1| 781|Homo sapiens beta catenin protein. 76 6e-14
X87838-1|CAA61107.1| 781|Homo sapiens beta-catenin protein. 76 6e-14
BC058926-1|AAH58926.1| 781|Homo sapiens catenin (cadherin-assoc... 76 6e-14
AY463360-1|AAR18817.1| 781|Homo sapiens catenin (cadherin-assoc... 76 6e-14
AY081165-1|AAL89457.1| 312|Homo sapiens beta-catenin protein. 76 6e-14
Z68228-1|CAA92522.1| 745|Homo sapiens plakoglobin protein. 40 0.003
M23410-1|AAA64895.1| 744|Homo sapiens Plakoglobin protein. 40 0.003
BC011865-1|AAH11865.1| 745|Homo sapiens JUP protein protein. 40 0.003
BC000441-1|AAH00441.2| 784|Homo sapiens JUP protein protein. 40 0.003
AY243535-1|AAO85780.1| 745|Homo sapiens gamma-catenin protein. 40 0.003
AF306723-1|AAG16727.1| 745|Homo sapiens plakoglobin protein. 40 0.003
AK131528-1|BAD18666.1| 1586|Homo sapiens protein ( Homo sapiens ... 31 1.6
AB018345-1|BAA34522.2| 1578|Homo sapiens KIAA0802 protein protein. 30 2.8
Y14314-1|CAA74694.1| 757|Homo sapiens IgE autoantigen protein. 29 6.5
BT006637-1|AAP35283.1| 800|Homo sapiens squamous cell carcinoma... 29 6.5
BC001058-1|AAH01058.1| 800|Homo sapiens squamous cell carcinoma... 29 6.5
AK223016-1|BAD96736.1| 800|Homo sapiens squamous cell carcinoma... 29 6.5
AF353625-1|AAK49523.1| 800|Homo sapiens U4/U6.U5 tri-snRNP-asso... 29 6.5
AB006198-1|BAA24056.1| 800|Homo sapiens SART-1 protein. 29 6.5
>Z19054-1|CAA79497.1| 781|Homo sapiens beta catenin protein.
Length = 781
Score = 75.8 bits (178), Expect = 6e-14
Identities = 36/76 (47%), Positives = 55/76 (72%), Gaps = 3/76 (3%)
Frame = +1
Query: 199 DVPMAPNKEQQTLMWQQNSYLVDSGINSGAATQVPSLTGK---EDDEMEGDQLMFDLDQG 369
D+ M P+++ WQQ SYL DSGI+SGA T PSL+GK E+++++ Q++++ +QG
Sbjct: 11 DMAMEPDRKAAVSHWQQQSYL-DSGIHSGATTTAPSLSGKGNPEEEDVDTSQVLYEWEQG 69
Query: 370 FAQGFTQEQVDDMNQQ 417
F+Q FTQEQV D++ Q
Sbjct: 70 FSQSFTQEQVADIDGQ 85
>X87838-1|CAA61107.1| 781|Homo sapiens beta-catenin protein.
Length = 781
Score = 75.8 bits (178), Expect = 6e-14
Identities = 36/76 (47%), Positives = 55/76 (72%), Gaps = 3/76 (3%)
Frame = +1
Query: 199 DVPMAPNKEQQTLMWQQNSYLVDSGINSGAATQVPSLTGK---EDDEMEGDQLMFDLDQG 369
D+ M P+++ WQQ SYL DSGI+SGA T PSL+GK E+++++ Q++++ +QG
Sbjct: 11 DMAMEPDRKAAVSHWQQQSYL-DSGIHSGATTTAPSLSGKGNPEEEDVDTSQVLYEWEQG 69
Query: 370 FAQGFTQEQVDDMNQQ 417
F+Q FTQEQV D++ Q
Sbjct: 70 FSQSFTQEQVADIDGQ 85
>BC058926-1|AAH58926.1| 781|Homo sapiens catenin
(cadherin-associated protein), beta 1, 88kDa protein.
Length = 781
Score = 75.8 bits (178), Expect = 6e-14
Identities = 36/76 (47%), Positives = 55/76 (72%), Gaps = 3/76 (3%)
Frame = +1
Query: 199 DVPMAPNKEQQTLMWQQNSYLVDSGINSGAATQVPSLTGK---EDDEMEGDQLMFDLDQG 369
D+ M P+++ WQQ SYL DSGI+SGA T PSL+GK E+++++ Q++++ +QG
Sbjct: 11 DMAMEPDRKAAVSHWQQQSYL-DSGIHSGATTTAPSLSGKGNPEEEDVDTSQVLYEWEQG 69
Query: 370 FAQGFTQEQVDDMNQQ 417
F+Q FTQEQV D++ Q
Sbjct: 70 FSQSFTQEQVADIDGQ 85
>AY463360-1|AAR18817.1| 781|Homo sapiens catenin
(cadherin-associated protein), beta 1, 88kDa protein.
Length = 781
Score = 75.8 bits (178), Expect = 6e-14
Identities = 36/76 (47%), Positives = 55/76 (72%), Gaps = 3/76 (3%)
Frame = +1
Query: 199 DVPMAPNKEQQTLMWQQNSYLVDSGINSGAATQVPSLTGK---EDDEMEGDQLMFDLDQG 369
D+ M P+++ WQQ SYL DSGI+SGA T PSL+GK E+++++ Q++++ +QG
Sbjct: 11 DMAMEPDRKAAVSHWQQQSYL-DSGIHSGATTTAPSLSGKGNPEEEDVDTSQVLYEWEQG 69
Query: 370 FAQGFTQEQVDDMNQQ 417
F+Q FTQEQV D++ Q
Sbjct: 70 FSQSFTQEQVADIDGQ 85
>AY081165-1|AAL89457.1| 312|Homo sapiens beta-catenin protein.
Length = 312
Score = 75.8 bits (178), Expect = 6e-14
Identities = 36/76 (47%), Positives = 55/76 (72%), Gaps = 3/76 (3%)
Frame = +1
Query: 199 DVPMAPNKEQQTLMWQQNSYLVDSGINSGAATQVPSLTGK---EDDEMEGDQLMFDLDQG 369
D+ M P+++ WQQ SYL DSGI+SGA T PSL+GK E+++++ Q++++ +QG
Sbjct: 11 DMAMEPDRKAAVSHWQQQSYL-DSGIHSGATTTAPSLSGKGNPEEEDVDTSQVLYEWEQG 69
Query: 370 FAQGFTQEQVDDMNQQ 417
F+Q FTQEQV D++ Q
Sbjct: 70 FSQSFTQEQVADIDGQ 85
>Z68228-1|CAA92522.1| 745|Homo sapiens plakoglobin protein.
Length = 745
Score = 40.3 bits (90), Expect = 0.003
Identities = 25/57 (43%), Positives = 31/57 (54%), Gaps = 3/57 (5%)
Frame = +1
Query: 241 WQQNSYLVDSGINSGAATQVPSLTGK---EDDEMEGDQLMFDLDQGFAQGFTQEQVD 402
WQQ +Y DSGI+SGA T VPS++ K E+DE G Q + QG Q D
Sbjct: 16 WQQ-TYTYDSGIHSGANTCVPSVSSKGIMEEDEACGRQYTLKKTTTYTQGVPPSQGD 71
>M23410-1|AAA64895.1| 744|Homo sapiens Plakoglobin protein.
Length = 744
Score = 40.3 bits (90), Expect = 0.003
Identities = 25/57 (43%), Positives = 31/57 (54%), Gaps = 3/57 (5%)
Frame = +1
Query: 241 WQQNSYLVDSGINSGAATQVPSLTGK---EDDEMEGDQLMFDLDQGFAQGFTQEQVD 402
WQQ +Y DSGI+SGA T VPS++ K E+DE G Q + QG Q D
Sbjct: 16 WQQ-TYTYDSGIHSGANTCVPSVSSKGIMEEDEACGRQYTLKKTTTYTQGVPPSQGD 71
>BC011865-1|AAH11865.1| 745|Homo sapiens JUP protein protein.
Length = 745
Score = 40.3 bits (90), Expect = 0.003
Identities = 25/57 (43%), Positives = 31/57 (54%), Gaps = 3/57 (5%)
Frame = +1
Query: 241 WQQNSYLVDSGINSGAATQVPSLTGK---EDDEMEGDQLMFDLDQGFAQGFTQEQVD 402
WQQ +Y DSGI+SGA T VPS++ K E+DE G Q + QG Q D
Sbjct: 16 WQQ-TYTYDSGIHSGANTCVPSVSSKGIMEEDEACGRQYTLKKTTTYTQGVPPSQGD 71
>BC000441-1|AAH00441.2| 784|Homo sapiens JUP protein protein.
Length = 784
Score = 40.3 bits (90), Expect = 0.003
Identities = 25/57 (43%), Positives = 31/57 (54%), Gaps = 3/57 (5%)
Frame = +1
Query: 241 WQQNSYLVDSGINSGAATQVPSLTGK---EDDEMEGDQLMFDLDQGFAQGFTQEQVD 402
WQQ +Y DSGI+SGA T VPS++ K E+DE G Q + QG Q D
Sbjct: 55 WQQ-TYTYDSGIHSGANTCVPSVSSKGIMEEDEACGRQYTLKKTTTYTQGVPPSQGD 110
>AY243535-1|AAO85780.1| 745|Homo sapiens gamma-catenin protein.
Length = 745
Score = 40.3 bits (90), Expect = 0.003
Identities = 25/57 (43%), Positives = 31/57 (54%), Gaps = 3/57 (5%)
Frame = +1
Query: 241 WQQNSYLVDSGINSGAATQVPSLTGK---EDDEMEGDQLMFDLDQGFAQGFTQEQVD 402
WQQ +Y DSGI+SGA T VPS++ K E+DE G Q + QG Q D
Sbjct: 16 WQQ-TYTYDSGIHSGANTCVPSVSSKGIMEEDEACGRQYTLKKTTTYTQGVPPSQGD 71
>AF306723-1|AAG16727.1| 745|Homo sapiens plakoglobin protein.
Length = 745
Score = 40.3 bits (90), Expect = 0.003
Identities = 25/57 (43%), Positives = 31/57 (54%), Gaps = 3/57 (5%)
Frame = +1
Query: 241 WQQNSYLVDSGINSGAATQVPSLTGK---EDDEMEGDQLMFDLDQGFAQGFTQEQVD 402
WQQ +Y DSGI+SGA T VPS++ K E+DE G Q + QG Q D
Sbjct: 16 WQQ-TYTYDSGIHSGANTCVPSVSSKGIMEEDEACGRQYTLKKTTTYTQGVPPSQGD 71
>AK131528-1|BAD18666.1| 1586|Homo sapiens protein ( Homo sapiens
cDNA FLJ16757 fis, clone BRACE3026993. ).
Length = 1586
Score = 31.1 bits (67), Expect = 1.6
Identities = 20/67 (29%), Positives = 34/67 (50%), Gaps = 2/67 (2%)
Frame = +1
Query: 151 PSSQSRTMSHSSYVASDVPMAPNKEQ--QTLMWQQNSYLVDSGINSGAATQVPSLTGKED 324
P+ + S Y+ + A E+ + L+ +S+L D+G+ GA P L G E+
Sbjct: 441 PTELLKAREDSEYLVTLKHEAQRLERTVERLITDTDSFLHDAGLRGGAPLPGPGLQG-EE 499
Query: 325 DEMEGDQ 345
++ EGDQ
Sbjct: 500 EQGEGDQ 506
>AB018345-1|BAA34522.2| 1578|Homo sapiens KIAA0802 protein protein.
Length = 1578
Score = 30.3 bits (65), Expect = 2.8
Identities = 20/67 (29%), Positives = 33/67 (49%), Gaps = 2/67 (2%)
Frame = +1
Query: 151 PSSQSRTMSHSSYVASDVPMAPNKEQ--QTLMWQQNSYLVDSGINSGAATQVPSLTGKED 324
P+ + S Y+ + A E+ + L+ +S+L D+G+ GA P L G E+
Sbjct: 474 PTELLKAREDSEYLVTLKHEAQRLERTVERLITDTDSFLHDAGLRGGAPLPGPGLQG-EE 532
Query: 325 DEMEGDQ 345
+ EGDQ
Sbjct: 533 ERGEGDQ 539
>Y14314-1|CAA74694.1| 757|Homo sapiens IgE autoantigen protein.
Length = 757
Score = 29.1 bits (62), Expect = 6.5
Identities = 16/57 (28%), Positives = 32/57 (56%), Gaps = 2/57 (3%)
Frame = +1
Query: 256 YLVDSGINSGAATQVPSLTGKEDDEMEGDQ-LMFDLDQ-GFAQGFTQEQVDDMNQQL 420
Y D ++ A + S+ K D+E+EG++ F L+Q G A G + +++++ +L
Sbjct: 274 YAEDESVDDLAQQKPRSILSKYDEELEGERPHSFRLEQGGTADGLRERELEEIRAKL 330
>BT006637-1|AAP35283.1| 800|Homo sapiens squamous cell carcinoma
antigen recognised by T cells protein.
Length = 800
Score = 29.1 bits (62), Expect = 6.5
Identities = 16/57 (28%), Positives = 32/57 (56%), Gaps = 2/57 (3%)
Frame = +1
Query: 256 YLVDSGINSGAATQVPSLTGKEDDEMEGDQ-LMFDLDQ-GFAQGFTQEQVDDMNQQL 420
Y D ++ A + S+ K D+E+EG++ F L+Q G A G + +++++ +L
Sbjct: 316 YAEDESVDDLAQQKPRSILSKYDEELEGERPHSFRLEQGGTADGLRERELEEIRAKL 372
>BC001058-1|AAH01058.1| 800|Homo sapiens squamous cell carcinoma
antigen recognized by T cells protein.
Length = 800
Score = 29.1 bits (62), Expect = 6.5
Identities = 16/57 (28%), Positives = 32/57 (56%), Gaps = 2/57 (3%)
Frame = +1
Query: 256 YLVDSGINSGAATQVPSLTGKEDDEMEGDQ-LMFDLDQ-GFAQGFTQEQVDDMNQQL 420
Y D ++ A + S+ K D+E+EG++ F L+Q G A G + +++++ +L
Sbjct: 316 YAEDESVDDLAQQKPRSILSKYDEELEGERPHSFRLEQGGTADGLRERELEEIRAKL 372
>AK223016-1|BAD96736.1| 800|Homo sapiens squamous cell carcinoma
antigen recognized by T cells 1 variant protein.
Length = 800
Score = 29.1 bits (62), Expect = 6.5
Identities = 16/57 (28%), Positives = 32/57 (56%), Gaps = 2/57 (3%)
Frame = +1
Query: 256 YLVDSGINSGAATQVPSLTGKEDDEMEGDQ-LMFDLDQ-GFAQGFTQEQVDDMNQQL 420
Y D ++ A + S+ K D+E+EG++ F L+Q G A G + +++++ +L
Sbjct: 316 YAEDESVDDLAQQKPRSILSKYDEELEGERPHSFRLEQGGTADGLRERELEEIRAKL 372
>AF353625-1|AAK49523.1| 800|Homo sapiens U4/U6.U5
tri-snRNP-associated 110 kDa protein protein.
Length = 800
Score = 29.1 bits (62), Expect = 6.5
Identities = 16/57 (28%), Positives = 32/57 (56%), Gaps = 2/57 (3%)
Frame = +1
Query: 256 YLVDSGINSGAATQVPSLTGKEDDEMEGDQ-LMFDLDQ-GFAQGFTQEQVDDMNQQL 420
Y D ++ A + S+ K D+E+EG++ F L+Q G A G + +++++ +L
Sbjct: 316 YAEDESVDDLAQQKPRSILSKYDEELEGERPHSFRLEQGGTADGLRERELEEIRAKL 372
>AB006198-1|BAA24056.1| 800|Homo sapiens SART-1 protein.
Length = 800
Score = 29.1 bits (62), Expect = 6.5
Identities = 16/57 (28%), Positives = 32/57 (56%), Gaps = 2/57 (3%)
Frame = +1
Query: 256 YLVDSGINSGAATQVPSLTGKEDDEMEGDQ-LMFDLDQ-GFAQGFTQEQVDDMNQQL 420
Y D ++ A + S+ K D+E+EG++ F L+Q G A G + +++++ +L
Sbjct: 316 YAEDESVDDLAQQKPRSILSKYDEELEGERPHSFRLEQGGTADGLRERELEEIRAKL 372
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 63,810,690
Number of Sequences: 237096
Number of extensions: 1335397
Number of successful extensions: 6240
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 6169
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6230
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3259265358
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -