Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP13_F_D14
         (571 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U80446-6|AAB37805.2|  783|Caenorhabditis elegans Hypothetical pr...    31   0.58 
Z77134-3|CAB00874.1| 1603|Caenorhabditis elegans Hypothetical pr...    31   0.77 
Z92796-5|CAB07233.1|  518|Caenorhabditis elegans Hypothetical pr...    29   2.4  
Z99771-1|CAB16919.2|  910|Caenorhabditis elegans Hypothetical pr...    27   9.5  
Z83116-4|CAB05562.1|  287|Caenorhabditis elegans Hypothetical pr...    27   9.5  
Z66511-8|CAA91319.2|  910|Caenorhabditis elegans Hypothetical pr...    27   9.5  
AF016415-8|AAW88415.1|  297|Caenorhabditis elegans Serpentine re...    27   9.5  

>U80446-6|AAB37805.2|  783|Caenorhabditis elegans Hypothetical
           protein F56A3.1 protein.
          Length = 783

 Score = 31.1 bits (67), Expect = 0.58
 Identities = 18/59 (30%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
 Frame = -2

Query: 282 FLQGILICEVSFVCE-SQQTVSFLRRYWSGGQHLLLFTASIKKCKNK*PRTLFN*IKFI 109
           F  G+ + E++F+   S+ ++   RR+  GG HLL+    ++K +N+  R L +  KF+
Sbjct: 541 FSDGLPLSELTFIASISRDSLFNFRRF--GGAHLLIINDPLEKLRNEDGRLLVDDGKFV 597


>Z77134-3|CAB00874.1| 1603|Caenorhabditis elegans Hypothetical protein
            R09H10.5 protein.
          Length = 1603

 Score = 30.7 bits (66), Expect = 0.77
 Identities = 21/64 (32%), Positives = 34/64 (53%)
 Frame = +2

Query: 161  FMEAVNSKRCCPPDQYLLKNETVCWDSQTNETSQINMPCKKYVFIRKFIERDGKLVLISL 340
            F+  +N+K    P+ YLLKN     DS    T  +N+P K+Y  +  F + + K+V  S 
Sbjct: 1153 FVVEINTKNMILPNSYLLKNIQAFVDS----TDDVNVP-KQYTLV-TFDDTNIKVVASST 1206

Query: 341  GKEI 352
             K++
Sbjct: 1207 RKDV 1210


>Z92796-5|CAB07233.1|  518|Caenorhabditis elegans Hypothetical
           protein H25K10.6 protein.
          Length = 518

 Score = 29.1 bits (62), Expect = 2.4
 Identities = 16/37 (43%), Positives = 21/37 (56%)
 Frame = -1

Query: 370 TNIQWPYFFPQANKHQFSISFYKLSYEHIFFTRHINL 260
           TN     FFPQ N+ + SI+FY  +Y  IF T +  L
Sbjct: 119 TNFTSLSFFPQLNRPETSINFYCYTY-GIFITNNSQL 154


>Z99771-1|CAB16919.2|  910|Caenorhabditis elegans Hypothetical
           protein D1043.1 protein.
          Length = 910

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 13/46 (28%), Positives = 25/46 (54%)
 Frame = -2

Query: 537 LLYMATVIARKITDTIIQYPKTVSFGSISVAHXTATFWIIDNLRRL 400
           L+ +  V+ ++ ++TIIQ P   +  + S+       WII+ +R L
Sbjct: 676 LVAVRVVLKKQSSETIIQIPPLTTARTCSLFQRERLQWIIEKIRLL 721


>Z83116-4|CAB05562.1|  287|Caenorhabditis elegans Hypothetical
           protein M01B2.4 protein.
          Length = 287

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 15/53 (28%), Positives = 23/53 (43%)
 Frame = -2

Query: 312 LSINFLMNTYFLQGILICEVSFVCESQQTVSFLRRYWSGGQHLLLFTASIKKC 154
           +SI F    +FL G L+  + +  +     S    YW  G   L +T S+  C
Sbjct: 11  ISIVFATTAFFLNGFLLLSIFYYKKITVNPSMTFIYWKFGAD-LFYTLSLSIC 62


>Z66511-8|CAA91319.2|  910|Caenorhabditis elegans Hypothetical
           protein D1043.1 protein.
          Length = 910

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 13/46 (28%), Positives = 25/46 (54%)
 Frame = -2

Query: 537 LLYMATVIARKITDTIIQYPKTVSFGSISVAHXTATFWIIDNLRRL 400
           L+ +  V+ ++ ++TIIQ P   +  + S+       WII+ +R L
Sbjct: 676 LVAVRVVLKKQSSETIIQIPPLTTARTCSLFQRERLQWIIEKIRLL 721


>AF016415-8|AAW88415.1|  297|Caenorhabditis elegans Serpentine
           receptor, class bc (class b-like) protein 32 protein.
          Length = 297

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 11/28 (39%), Positives = 18/28 (64%)
 Frame = +2

Query: 476 FGYCMIVSVIFLAITVAIYSSFSNLRDL 559
           F  C++V +IF+ +T+ +   FSN R L
Sbjct: 54  FSTCLLVYIIFVILTMEVPHLFSNHRGL 81


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,149,810
Number of Sequences: 27780
Number of extensions: 278573
Number of successful extensions: 789
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 773
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 789
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1187327456
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)