Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP13_F_D13
         (556 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT001487-1|AAN71242.1|  444|Drosophila melanogaster LD23846p pro...    74   1e-13
AE014297-3179|AAN13909.1|  444|Drosophila melanogaster CG5315-PC...    74   1e-13
AE014297-3178|AAF56016.2|  444|Drosophila melanogaster CG5315-PA...    74   1e-13
AE014297-3180|AAF56017.3|  362|Drosophila melanogaster CG5315-PB...    34   0.15 
AY094970-1|AAM11323.1| 1118|Drosophila melanogaster SD09067p pro...    29   4.2  
AE014297-4114|AAF56695.2| 1120|Drosophila melanogaster CG3368-PA...    29   4.2  

>BT001487-1|AAN71242.1|  444|Drosophila melanogaster LD23846p
           protein.
          Length = 444

 Score = 73.7 bits (173), Expect = 1e-13
 Identities = 36/67 (53%), Positives = 46/67 (68%), Gaps = 3/67 (4%)
 Frame = +2

Query: 365 LRRRQGWDPDAXSLASQMDEL---DXVLAXXEEGCPLASTPEDQHLLDAEMAEXLKAGVL 535
           LR+R+GW P+     + +D L   D ++   + GCPL STPED  L++AEM E LKAGVL
Sbjct: 73  LRKRRGWGPEDSLSPNDLDILEYDDELVEEDDAGCPLPSTPEDTQLIEAEMTEVLKAGVL 132

Query: 536 SDEIDLG 556
           SDEIDLG
Sbjct: 133 SDEIDLG 139


>AE014297-3179|AAN13909.1|  444|Drosophila melanogaster CG5315-PC,
           isoform C protein.
          Length = 444

 Score = 73.7 bits (173), Expect = 1e-13
 Identities = 36/67 (53%), Positives = 46/67 (68%), Gaps = 3/67 (4%)
 Frame = +2

Query: 365 LRRRQGWDPDAXSLASQMDEL---DXVLAXXEEGCPLASTPEDQHLLDAEMAEXLKAGVL 535
           LR+R+GW P+     + +D L   D ++   + GCPL STPED  L++AEM E LKAGVL
Sbjct: 73  LRKRRGWGPEDSLSPNDLDILEYDDELVEEDDAGCPLPSTPEDTQLIEAEMTEVLKAGVL 132

Query: 536 SDEIDLG 556
           SDEIDLG
Sbjct: 133 SDEIDLG 139


>AE014297-3178|AAF56016.2|  444|Drosophila melanogaster CG5315-PA,
           isoform A protein.
          Length = 444

 Score = 73.7 bits (173), Expect = 1e-13
 Identities = 36/67 (53%), Positives = 46/67 (68%), Gaps = 3/67 (4%)
 Frame = +2

Query: 365 LRRRQGWDPDAXSLASQMDEL---DXVLAXXEEGCPLASTPEDQHLLDAEMAEXLKAGVL 535
           LR+R+GW P+     + +D L   D ++   + GCPL STPED  L++AEM E LKAGVL
Sbjct: 73  LRKRRGWGPEDSLSPNDLDILEYDDELVEEDDAGCPLPSTPEDTQLIEAEMTEVLKAGVL 132

Query: 536 SDEIDLG 556
           SDEIDLG
Sbjct: 133 SDEIDLG 139


>AE014297-3180|AAF56017.3|  362|Drosophila melanogaster CG5315-PB,
           isoform B protein.
          Length = 362

 Score = 33.9 bits (74), Expect = 0.15
 Identities = 16/20 (80%), Positives = 17/20 (85%)
 Frame = +2

Query: 497 DAEMAEXLKAGVLSDEIDLG 556
           +A M E LKAGVLSDEIDLG
Sbjct: 38  NAVMTEVLKAGVLSDEIDLG 57


>AY094970-1|AAM11323.1| 1118|Drosophila melanogaster SD09067p
           protein.
          Length = 1118

 Score = 29.1 bits (62), Expect = 4.2
 Identities = 13/30 (43%), Positives = 17/30 (56%)
 Frame = -1

Query: 379 LPASQSIGGHALGSNIRFHFPHLRLFQSRE 290
           L A   +GGHAL  NI+  F HL+    R+
Sbjct: 427 LKADIGVGGHALAQNIKRFFSHLQHLIERD 456


>AE014297-4114|AAF56695.2| 1120|Drosophila melanogaster CG3368-PA
           protein.
          Length = 1120

 Score = 29.1 bits (62), Expect = 4.2
 Identities = 13/30 (43%), Positives = 17/30 (56%)
 Frame = -1

Query: 379 LPASQSIGGHALGSNIRFHFPHLRLFQSRE 290
           L A   +GGHAL  NI+  F HL+    R+
Sbjct: 429 LKADIGVGGHALAQNIKRFFSHLQHLIERD 458


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,898,524
Number of Sequences: 53049
Number of extensions: 500283
Number of successful extensions: 1170
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1133
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1167
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2131214097
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)