Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP13_F_D13
(556 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U51925-1|AAA97909.1| 396|Caenorhabditis elegans trehalase I pro... 31 0.42
AJ512337-1|CAD54510.1| 567|Caenorhabditis elegans trehalase pro... 31 0.42
AF039713-5|AAB96724.2| 567|Caenorhabditis elegans Trehalase pro... 31 0.42
Z81085-2|CAB03114.2| 618|Caenorhabditis elegans Hypothetical pr... 29 3.0
AF077540-5|AAC26308.1| 417|Caenorhabditis elegans C-type lectin... 28 5.2
Z81512-3|CAE46668.1| 3175|Caenorhabditis elegans Hypothetical pr... 27 9.1
Z81512-2|CAB04172.2| 3184|Caenorhabditis elegans Hypothetical pr... 27 9.1
U39652-2|AAA80404.1| 817|Caenorhabditis elegans Hypothetical pr... 27 9.1
U23511-3|AAC46790.1| 636|Caenorhabditis elegans Small protein 6... 27 9.1
AF104017-1|AAD12261.1| 636|Caenorhabditis elegans serine-threon... 27 9.1
>U51925-1|AAA97909.1| 396|Caenorhabditis elegans trehalase I
protein.
Length = 396
Score = 31.5 bits (68), Expect = 0.42
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = -3
Query: 341 IQYQIPLPTSSLVSITRRWEIGNHWPP 261
++Y LPTS +S T++W+ N WPP
Sbjct: 256 LKYTKGLPTSLAMSSTQQWDKENAWPP 282
>AJ512337-1|CAD54510.1| 567|Caenorhabditis elegans trehalase
protein.
Length = 567
Score = 31.5 bits (68), Expect = 0.42
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = -3
Query: 341 IQYQIPLPTSSLVSITRRWEIGNHWPP 261
++Y LPTS +S T++W+ N WPP
Sbjct: 427 LKYTKGLPTSLAMSSTQQWDKENAWPP 453
>AF039713-5|AAB96724.2| 567|Caenorhabditis elegans Trehalase
protein 1 protein.
Length = 567
Score = 31.5 bits (68), Expect = 0.42
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = -3
Query: 341 IQYQIPLPTSSLVSITRRWEIGNHWPP 261
++Y LPTS +S T++W+ N WPP
Sbjct: 427 LKYTKGLPTSLAMSSTQQWDKENAWPP 453
>Z81085-2|CAB03114.2| 618|Caenorhabditis elegans Hypothetical
protein F46F3.2 protein.
Length = 618
Score = 28.7 bits (61), Expect = 3.0
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = -3
Query: 344 GIQYQIPLPTSSLVSITRRWEIGNHWPP 261
G+ YQ PLP+S+++ R+ E PP
Sbjct: 238 GLDYQRPLPSSTILPFLRKMEYDARQPP 265
>AF077540-5|AAC26308.1| 417|Caenorhabditis elegans C-type lectin
protein 20 protein.
Length = 417
Score = 27.9 bits (59), Expect = 5.2
Identities = 16/42 (38%), Positives = 19/42 (45%)
Frame = -3
Query: 518 KXQPFRHPTDVDPPVLKPADILLLXXRGLXRARPFERQGXPH 393
K P R P D PPVL + +L +GL A P G H
Sbjct: 282 KCNPDR-PEDPTPPVLYTCNTTILVTQGLIIAPPITEAGLEH 322
>Z81512-3|CAE46668.1| 3175|Caenorhabditis elegans Hypothetical
protein F25C8.3b protein.
Length = 3175
Score = 27.1 bits (57), Expect = 9.1
Identities = 13/48 (27%), Positives = 27/48 (56%)
Frame = -3
Query: 551 NQSHRITRQLLKXQPFRHPTDVDPPVLKPADILLLXXRGLXRARPFER 408
N+ ++ + +K + +++ P LKP D+L+ +G+ R + FER
Sbjct: 281 NEKRKLEEEKMKMKEDYVAIEIEAPSLKPNDLLIDMSQGV-RNKEFER 327
>Z81512-2|CAB04172.2| 3184|Caenorhabditis elegans Hypothetical
protein F25C8.3a protein.
Length = 3184
Score = 27.1 bits (57), Expect = 9.1
Identities = 13/48 (27%), Positives = 27/48 (56%)
Frame = -3
Query: 551 NQSHRITRQLLKXQPFRHPTDVDPPVLKPADILLLXXRGLXRARPFER 408
N+ ++ + +K + +++ P LKP D+L+ +G+ R + FER
Sbjct: 281 NEKRKLEEEKMKMKEDYVAIEIEAPSLKPNDLLIDMSQGV-RNKEFER 327
>U39652-2|AAA80404.1| 817|Caenorhabditis elegans Hypothetical
protein R07E4.5 protein.
Length = 817
Score = 27.1 bits (57), Expect = 9.1
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = +3
Query: 339 DPKACPPMDCDAGKDGIPM 395
D A PPMDC A D +P+
Sbjct: 460 DSPASPPMDCPASPDMVPV 478
>U23511-3|AAC46790.1| 636|Caenorhabditis elegans Small protein 6
protein.
Length = 636
Score = 27.1 bits (57), Expect = 9.1
Identities = 16/51 (31%), Positives = 25/51 (49%), Gaps = 5/51 (9%)
Frame = -1
Query: 157 DKNHFD-RPLALKI----LYTEMNYRQLLLQRVRFPTAVKTLLTSRCRCGY 20
D +HFD LAL I + +RQ +L+ ++ +L +RC C Y
Sbjct: 22 DYDHFDDEDLALSIPKNAIGVPKEFRQQVLKEMKLRNRPNDILKNRCYCNY 72
>AF104017-1|AAD12261.1| 636|Caenorhabditis elegans serine-threonine
kinase SMA-6 protein.
Length = 636
Score = 27.1 bits (57), Expect = 9.1
Identities = 16/51 (31%), Positives = 25/51 (49%), Gaps = 5/51 (9%)
Frame = -1
Query: 157 DKNHFD-RPLALKI----LYTEMNYRQLLLQRVRFPTAVKTLLTSRCRCGY 20
D +HFD LAL I + +RQ +L+ ++ +L +RC C Y
Sbjct: 22 DYDHFDDEDLALSIPKNAIGVPKEFRQQVLKEMKLRNRPNDILKNRCYCNY 72
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,690,594
Number of Sequences: 27780
Number of extensions: 257734
Number of successful extensions: 656
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 635
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 656
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1134321766
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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