Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP13_F_D08
(560 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024817-44|AAK93864.2| 168|Caenorhabditis elegans Hypothetical... 130 5e-31
Z37092-4|CAA85455.1| 890|Caenorhabditis elegans Hypothetical pr... 31 0.43
U40417-7|AAA81416.1| 103|Caenorhabditis elegans Saposin-like pr... 31 0.43
Z78061-3|CAB60286.1| 662|Caenorhabditis elegans Hypothetical pr... 29 2.3
AL117200-16|CAB60587.1| 662|Caenorhabditis elegans Hypothetical... 29 2.3
AF016444-8|AAB65934.1| 219|Caenorhabditis elegans Hypothetical ... 29 2.3
Z71262-12|CAA95808.1| 545|Caenorhabditis elegans Hypothetical p... 29 3.0
Z93384-4|CAE17903.1| 308|Caenorhabditis elegans Hypothetical pr... 28 4.0
AL021492-15|CAE18000.1| 308|Caenorhabditis elegans Hypothetical... 28 4.0
Z81063-1|CAB02952.1| 376|Caenorhabditis elegans Hypothetical pr... 28 5.3
Z78412-9|CAD21655.1| 454|Caenorhabditis elegans Hypothetical pr... 28 5.3
AF022973-9|AAC25802.2| 1373|Caenorhabditis elegans Hypothetical ... 27 7.0
L10986-9|AAK93847.2| 808|Caenorhabditis elegans Spindle assembl... 27 9.2
AJ539470-1|CAD62434.1| 808|Caenorhabditis elegans SAS-4 protein... 27 9.2
AF024502-2|AAK77623.1| 591|Caenorhabditis elegans Hypothetical ... 27 9.2
AF022985-3|AAB69970.1| 355|Caenorhabditis elegans Hypothetical ... 27 9.2
>AC024817-44|AAK93864.2| 168|Caenorhabditis elegans Hypothetical
protein Y54G2A.23 protein.
Length = 168
Score = 130 bits (315), Expect = 5e-31
Identities = 61/143 (42%), Positives = 84/143 (58%), Gaps = 1/143 (0%)
Frame = +1
Query: 130 LLFLATAVQVVLSLREGDCEVCVKTVEKFAATLSDDVKKDPKKIEAEFKKFCKGSKNKEN 309
L+ L + V VV S CEVC K ++ A + K P I ++ C+ ++NKEN
Sbjct: 4 LVLLISLVIVVASAAAPQCEVCKKVLDDVMAKVPAGDKSKPDAIGKVIREHCETTRNKEN 63
Query: 310 RFCYYLGGLEESATGILGELSKPLSWSMPADKIC-EKLKKKDAQICDLRFDKQIDLNNXX 486
+FC+Y+G L ESAT I+ E++KPLSWSMP +K+C EKLK KDAQIC+L++DK +D
Sbjct: 64 KFCFYIGALPESATSIMNEVTKPLSWSMPTEKVCLEKLKGKDAQICELKYDKPLDWKTID 123
Query: 487 XXXXXXXXXXXXXNDWDEVCDGC 555
+W EVC GC
Sbjct: 124 LKKMRVKELKNILGEWGEVCKGC 146
>Z37092-4|CAA85455.1| 890|Caenorhabditis elegans Hypothetical
protein F44F4.4 protein.
Length = 890
Score = 31.5 bits (68), Expect = 0.43
Identities = 22/88 (25%), Positives = 37/88 (42%), Gaps = 2/88 (2%)
Frame = +1
Query: 139 LATAVQVVLSLREGDC--EVCVKTVEKFAATLSDDVKKDPKKIEAEFKKFCKGSKNKENR 312
+ TA+ + S+ G E +K V K + +S + K + +E F +FC+G
Sbjct: 84 ITTAILIRSSITNGSLLEEQRLKEVVKVSDFISTNFKLNVSGVEKNFNQFCRGFCQANEP 143
Query: 313 FCYYLGGLEESATGILGELSKPLSWSMP 396
Y GL+ +SK + S P
Sbjct: 144 VRQYYNGLQILGKNQTDGISKRIDLSYP 171
>U40417-7|AAA81416.1| 103|Caenorhabditis elegans Saposin-like
protein family protein4 protein.
Length = 103
Score = 31.5 bits (68), Expect = 0.43
Identities = 16/50 (32%), Positives = 26/50 (52%)
Frame = +1
Query: 130 LLFLATAVQVVLSLREGDCEVCVKTVEKFAATLSDDVKKDPKKIEAEFKK 279
L+F+ATAV + C++C V+K+ ++ DV K + E KK
Sbjct: 10 LVFVATAVVLPHQRNSLGCQMCELAVKKYDGSVDKDVNGIKKDFDTECKK 59
>Z78061-3|CAB60286.1| 662|Caenorhabditis elegans Hypothetical
protein C48G7.3 protein.
Length = 662
Score = 29.1 bits (62), Expect = 2.3
Identities = 14/50 (28%), Positives = 24/50 (48%)
Frame = +1
Query: 151 VQVVLSLREGDCEVCVKTVEKFAATLSDDVKKDPKKIEAEFKKFCKGSKN 300
V+ + ++EGD T+ +F A D + DP + ++F G KN
Sbjct: 250 VEELAQVKEGDNACFGLTLRQFVACTKDTKETDPAVVIRNVRQFINGMKN 299
>AL117200-16|CAB60587.1| 662|Caenorhabditis elegans Hypothetical
protein C48G7.3 protein.
Length = 662
Score = 29.1 bits (62), Expect = 2.3
Identities = 14/50 (28%), Positives = 24/50 (48%)
Frame = +1
Query: 151 VQVVLSLREGDCEVCVKTVEKFAATLSDDVKKDPKKIEAEFKKFCKGSKN 300
V+ + ++EGD T+ +F A D + DP + ++F G KN
Sbjct: 250 VEELAQVKEGDNACFGLTLRQFVACTKDTKETDPAVVIRNVRQFINGMKN 299
>AF016444-8|AAB65934.1| 219|Caenorhabditis elegans Hypothetical
protein C36C5.12 protein.
Length = 219
Score = 29.1 bits (62), Expect = 2.3
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +1
Query: 190 VCVKTVEKFAATLSDDVKKDPKKIEAEFKKFCKGSKN 300
+C++ + FAA + D++ D K EFKK C KN
Sbjct: 59 LCIERLRDFAAKV-DELDMDKKSELKEFKKTCDSLKN 94
>Z71262-12|CAA95808.1| 545|Caenorhabditis elegans Hypothetical
protein F22D6.3a protein.
Length = 545
Score = 28.7 bits (61), Expect = 3.0
Identities = 35/105 (33%), Positives = 48/105 (45%), Gaps = 4/105 (3%)
Frame = +1
Query: 139 LATAVQVVL-SLREGDCEVCVKTVE--KFAATLSDDVKKDPKKIEAEFKKFCK-GSKNKE 306
LAT VQ +L S G+ + K+ E + +KK KK EAE KK K G + KE
Sbjct: 23 LATLVQAMLISKNSGEFLMKKKSEEGESWEPAAKAAIKKAVKKYEAEVKKLEKAGCREKE 82
Query: 307 NRFCYYLGGLEESATGILGELSKPLSWSMPADKICEKLKKKDAQI 441
+ LEE A I L K L KI E ++ +D ++
Sbjct: 83 AEEAQH-AALEE-AKKITFSLDKSLP-EAKVIKIGESVQHRDQRV 124
>Z93384-4|CAE17903.1| 308|Caenorhabditis elegans Hypothetical
protein Y45F10D.15 protein.
Length = 308
Score = 28.3 bits (60), Expect = 4.0
Identities = 28/112 (25%), Positives = 49/112 (43%), Gaps = 6/112 (5%)
Frame = +1
Query: 7 IQFFDNLRGILAFPXFILXVSKFITHEFKYSSKMFK----FSLFHLLFLATAVQVVLSLR 174
+Q+F NL +L F VSK + F+ +++M + F+LF F+ + + V L +
Sbjct: 97 LQYFFNLAHLLLVTYFARQVSKHRSVSFEVTTRMRRTLVAFNLFS--FIISTLLVNLQVS 154
Query: 175 EGDCEV--CVKTVEKFAATLSDDVKKDPKKIEAEFKKFCKGSKNKENRFCYY 324
G +V C+ + V I+ K F + + EN F Y+
Sbjct: 155 SGIVKVFSCIYAIPTVIFLPVYVVIHFVANIKGSLKCFRRKKEGDENDFSYF 206
>AL021492-15|CAE18000.1| 308|Caenorhabditis elegans Hypothetical
protein Y45F10D.15 protein.
Length = 308
Score = 28.3 bits (60), Expect = 4.0
Identities = 28/112 (25%), Positives = 49/112 (43%), Gaps = 6/112 (5%)
Frame = +1
Query: 7 IQFFDNLRGILAFPXFILXVSKFITHEFKYSSKMFK----FSLFHLLFLATAVQVVLSLR 174
+Q+F NL +L F VSK + F+ +++M + F+LF F+ + + V L +
Sbjct: 97 LQYFFNLAHLLLVTYFARQVSKHRSVSFEVTTRMRRTLVAFNLFS--FIISTLLVNLQVS 154
Query: 175 EGDCEV--CVKTVEKFAATLSDDVKKDPKKIEAEFKKFCKGSKNKENRFCYY 324
G +V C+ + V I+ K F + + EN F Y+
Sbjct: 155 SGIVKVFSCIYAIPTVIFLPVYVVIHFVANIKGSLKCFRRKKEGDENDFSYF 206
>Z81063-1|CAB02952.1| 376|Caenorhabditis elegans Hypothetical
protein F15D3.2 protein.
Length = 376
Score = 27.9 bits (59), Expect = 5.3
Identities = 17/45 (37%), Positives = 22/45 (48%)
Frame = +1
Query: 139 LATAVQVVLSLREGDCEVCVKTVEKFAATLSDDVKKDPKKIEAEF 273
L+ A Q+ +E E K V FA+T DD DPK + A F
Sbjct: 120 LSGAEQLFKQDKEHSREHYRKVVIVFASTYKDDGANDPKPVAARF 164
>Z78412-9|CAD21655.1| 454|Caenorhabditis elegans Hypothetical
protein M176.10 protein.
Length = 454
Score = 27.9 bits (59), Expect = 5.3
Identities = 17/65 (26%), Positives = 28/65 (43%)
Frame = -1
Query: 404 LSAGIDQLKGFDNSPKMPVADSSRPPK**QNLFSLFFEPLQNFLNSASIFLGSFFTSSDS 225
+ A I+ + G N+ + + PPK + FS F +N + + +G FF S
Sbjct: 385 IHADIEVIVGNTNATTITSTVAPIPPK--KGFFSTLFGSFKNLFGTVTNSIGGFFIDMGS 442
Query: 224 VAANF 210
NF
Sbjct: 443 RITNF 447
>AF022973-9|AAC25802.2| 1373|Caenorhabditis elegans Hypothetical
protein F25G6.9 protein.
Length = 1373
Score = 27.5 bits (58), Expect = 7.0
Identities = 31/95 (32%), Positives = 46/95 (48%), Gaps = 3/95 (3%)
Frame = +1
Query: 199 KTVEKFAATLSDDVKKDPKKIEAEFKKFCK---GSKNKENRFCYYLGGLEESATGILGEL 369
+++EKF L KKD K+IE KK + + N E R Y G E + G
Sbjct: 930 ESIEKFFNGLISSPKKDLKEIEQNNKKVLEKLWNNGNNEVRRKIYEGLAELALISGTGR- 988
Query: 370 SKPLSWSMPADKICEKLKKKDAQICDLRFDKQIDL 474
SK + +PA K+ E + K Q+ FDK+I++
Sbjct: 989 SKMV---IPAGKLPEGILKGILQL----FDKKINV 1016
>L10986-9|AAK93847.2| 808|Caenorhabditis elegans Spindle assembly
abnormal protein 4 protein.
Length = 808
Score = 27.1 bits (57), Expect = 9.2
Identities = 20/78 (25%), Positives = 35/78 (44%)
Frame = +1
Query: 226 LSDDVKKDPKKIEAEFKKFCKGSKNKENRFCYYLGGLEESATGILGELSKPLSWSMPADK 405
L + +K+D + +E + K KG+ + F + L + + +K +
Sbjct: 397 LYEKLKRDQRDLERDQKILKKGTGERNKEFTETIATLRDK---LRASETKNAQYRQDIRV 453
Query: 406 ICEKLKKKDAQICDLRFD 459
EKLKKKD +I L+ D
Sbjct: 454 RDEKLKKKDEEIEKLQKD 471
>AJ539470-1|CAD62434.1| 808|Caenorhabditis elegans SAS-4 protein
protein.
Length = 808
Score = 27.1 bits (57), Expect = 9.2
Identities = 20/78 (25%), Positives = 35/78 (44%)
Frame = +1
Query: 226 LSDDVKKDPKKIEAEFKKFCKGSKNKENRFCYYLGGLEESATGILGELSKPLSWSMPADK 405
L + +K+D + +E + K KG+ + F + L + + +K +
Sbjct: 397 LYEKLKRDQRDLERDQKILKKGTGERNKEFTETIATLRDK---LRASETKNAQYRQDIRV 453
Query: 406 ICEKLKKKDAQICDLRFD 459
EKLKKKD +I L+ D
Sbjct: 454 RDEKLKKKDEEIEKLQKD 471
>AF024502-2|AAK77623.1| 591|Caenorhabditis elegans Hypothetical
protein M151.4 protein.
Length = 591
Score = 27.1 bits (57), Expect = 9.2
Identities = 19/65 (29%), Positives = 31/65 (47%)
Frame = +1
Query: 235 DVKKDPKKIEAEFKKFCKGSKNKENRFCYYLGGLEESATGILGELSKPLSWSMPADKICE 414
D+KK K + +K K KNKE G +EE + E+ K + D++ +
Sbjct: 222 DLKKALKDNQEGLEKIAKDVKNKE-------GEIEELKKSVSSEIVKATEAAHATDQLRK 274
Query: 415 KLKKK 429
KL+K+
Sbjct: 275 KLQKQ 279
>AF022985-3|AAB69970.1| 355|Caenorhabditis elegans Hypothetical
protein T15B7.11 protein.
Length = 355
Score = 27.1 bits (57), Expect = 9.2
Identities = 16/50 (32%), Positives = 24/50 (48%)
Frame = -1
Query: 302 LFFEPLQNFLNSASIFLGSFFTSSDSVAANFSTVFTHTSQSPSRSDRTTC 153
LF + L +++S+FL + +A NFS QSP + R TC
Sbjct: 115 LFVDYLAVVFHASSLFLAAGMALCRVMALNFSNRLKDKWQSPRYALRVTC 164
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,545,286
Number of Sequences: 27780
Number of extensions: 224093
Number of successful extensions: 689
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 665
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 687
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1155524042
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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