Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP13_F_D06
(427 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U57847-1|AAB02266.1| 84|Homo sapiens ribosomal protein S27 pro... 143 3e-34
L19739-1|AAA59867.1| 84|Homo sapiens metallopanstimulin protein. 143 3e-34
BC070219-1|AAH70219.1| 84|Homo sapiens ribosomal protein S27 (... 143 3e-34
BC002658-1|AAH02658.1| 84|Homo sapiens ribosomal protein S27 (... 143 3e-34
AL358472-19|CAI14033.1| 84|Homo sapiens ribosomal protein S27 ... 143 3e-34
AB061845-1|BAB79483.1| 84|Homo sapiens ribosomal protein S27 p... 143 3e-34
BC003667-1|AAH03667.1| 84|Homo sapiens ribosomal protein S27-l... 141 8e-34
BC047648-1|AAH47648.1| 113|Homo sapiens RPS27L protein protein. 126 2e-29
AB007162-1|BAA25825.1| 69|Homo sapiens ribosomal protein S27 p... 120 3e-27
AL358472-18|CAI14032.1| 66|Homo sapiens ribosomal protein S27 ... 51 2e-06
BC007355-1|AAH07355.1| 287|Homo sapiens solute carrier family 2... 29 8.7
AK075249-1|BAC11497.1| 287|Homo sapiens protein ( Homo sapiens ... 29 8.7
AJ131613-1|CAB59892.1| 287|Homo sapiens dicarboxylate carrier p... 29 8.7
AJ131612-1|CAB60007.1| 287|Homo sapiens dicarboxylate carrier p... 29 8.7
>U57847-1|AAB02266.1| 84|Homo sapiens ribosomal protein S27
protein.
Length = 84
Score = 143 bits (346), Expect = 3e-34
Identities = 61/70 (87%), Positives = 65/70 (92%)
Frame = +1
Query: 79 ERRKHKLKRLVPHPNSYFMDVKCPGCYKITTVFSHAQRVVVCAGCSTILCQPTGGRARLT 258
E+RKHK KRLV PNSYFMDVKCPGCYKITTVFSHAQ VV+C GCST+LCQPTGG+ARLT
Sbjct: 15 EKRKHKKKRLVQSPNSYFMDVKCPGCYKITTVFSHAQTVVLCVGCSTVLCQPTGGKARLT 74
Query: 259 EGCSFRRKQH 288
EGCSFRRKQH
Sbjct: 75 EGCSFRRKQH 84
>L19739-1|AAA59867.1| 84|Homo sapiens metallopanstimulin protein.
Length = 84
Score = 143 bits (346), Expect = 3e-34
Identities = 61/70 (87%), Positives = 65/70 (92%)
Frame = +1
Query: 79 ERRKHKLKRLVPHPNSYFMDVKCPGCYKITTVFSHAQRVVVCAGCSTILCQPTGGRARLT 258
E+RKHK KRLV PNSYFMDVKCPGCYKITTVFSHAQ VV+C GCST+LCQPTGG+ARLT
Sbjct: 15 EKRKHKKKRLVQSPNSYFMDVKCPGCYKITTVFSHAQTVVLCVGCSTVLCQPTGGKARLT 74
Query: 259 EGCSFRRKQH 288
EGCSFRRKQH
Sbjct: 75 EGCSFRRKQH 84
>BC070219-1|AAH70219.1| 84|Homo sapiens ribosomal protein S27
(metallopanstimulin 1) protein.
Length = 84
Score = 143 bits (346), Expect = 3e-34
Identities = 61/70 (87%), Positives = 65/70 (92%)
Frame = +1
Query: 79 ERRKHKLKRLVPHPNSYFMDVKCPGCYKITTVFSHAQRVVVCAGCSTILCQPTGGRARLT 258
E+RKHK KRLV PNSYFMDVKCPGCYKITTVFSHAQ VV+C GCST+LCQPTGG+ARLT
Sbjct: 15 EKRKHKKKRLVQSPNSYFMDVKCPGCYKITTVFSHAQTVVLCVGCSTVLCQPTGGKARLT 74
Query: 259 EGCSFRRKQH 288
EGCSFRRKQH
Sbjct: 75 EGCSFRRKQH 84
>BC002658-1|AAH02658.1| 84|Homo sapiens ribosomal protein S27
(metallopanstimulin 1) protein.
Length = 84
Score = 143 bits (346), Expect = 3e-34
Identities = 61/70 (87%), Positives = 65/70 (92%)
Frame = +1
Query: 79 ERRKHKLKRLVPHPNSYFMDVKCPGCYKITTVFSHAQRVVVCAGCSTILCQPTGGRARLT 258
E+RKHK KRLV PNSYFMDVKCPGCYKITTVFSHAQ VV+C GCST+LCQPTGG+ARLT
Sbjct: 15 EKRKHKKKRLVQSPNSYFMDVKCPGCYKITTVFSHAQTVVLCVGCSTVLCQPTGGKARLT 74
Query: 259 EGCSFRRKQH 288
EGCSFRRKQH
Sbjct: 75 EGCSFRRKQH 84
>AL358472-19|CAI14033.1| 84|Homo sapiens ribosomal protein S27
(metallopanstimulin 1) protein.
Length = 84
Score = 143 bits (346), Expect = 3e-34
Identities = 61/70 (87%), Positives = 65/70 (92%)
Frame = +1
Query: 79 ERRKHKLKRLVPHPNSYFMDVKCPGCYKITTVFSHAQRVVVCAGCSTILCQPTGGRARLT 258
E+RKHK KRLV PNSYFMDVKCPGCYKITTVFSHAQ VV+C GCST+LCQPTGG+ARLT
Sbjct: 15 EKRKHKKKRLVQSPNSYFMDVKCPGCYKITTVFSHAQTVVLCVGCSTVLCQPTGGKARLT 74
Query: 259 EGCSFRRKQH 288
EGCSFRRKQH
Sbjct: 75 EGCSFRRKQH 84
>AB061845-1|BAB79483.1| 84|Homo sapiens ribosomal protein S27
protein.
Length = 84
Score = 143 bits (346), Expect = 3e-34
Identities = 61/70 (87%), Positives = 65/70 (92%)
Frame = +1
Query: 79 ERRKHKLKRLVPHPNSYFMDVKCPGCYKITTVFSHAQRVVVCAGCSTILCQPTGGRARLT 258
E+RKHK KRLV PNSYFMDVKCPGCYKITTVFSHAQ VV+C GCST+LCQPTGG+ARLT
Sbjct: 15 EKRKHKKKRLVQSPNSYFMDVKCPGCYKITTVFSHAQTVVLCVGCSTVLCQPTGGKARLT 74
Query: 259 EGCSFRRKQH 288
EGCSFRRKQH
Sbjct: 75 EGCSFRRKQH 84
>BC003667-1|AAH03667.1| 84|Homo sapiens ribosomal protein S27-like
protein.
Length = 84
Score = 141 bits (342), Expect = 8e-34
Identities = 60/70 (85%), Positives = 65/70 (92%)
Frame = +1
Query: 79 ERRKHKLKRLVPHPNSYFMDVKCPGCYKITTVFSHAQRVVVCAGCSTILCQPTGGRARLT 258
E++KHK KRLV PNSYFMDVKCPGCYKITTVFSHAQ VV+C GCST+LCQPTGG+ARLT
Sbjct: 15 EKKKHKEKRLVQSPNSYFMDVKCPGCYKITTVFSHAQTVVLCVGCSTVLCQPTGGKARLT 74
Query: 259 EGCSFRRKQH 288
EGCSFRRKQH
Sbjct: 75 EGCSFRRKQH 84
>BC047648-1|AAH47648.1| 113|Homo sapiens RPS27L protein protein.
Length = 113
Score = 126 bits (305), Expect = 2e-29
Identities = 54/65 (83%), Positives = 59/65 (90%)
Frame = +1
Query: 79 ERRKHKLKRLVPHPNSYFMDVKCPGCYKITTVFSHAQRVVVCAGCSTILCQPTGGRARLT 258
E++KHK KRLV PNSYFMDVKCPGCYKITTVFSHAQ VV+C GCST+LCQPTGG+ARLT
Sbjct: 31 EKKKHKKKRLVQSPNSYFMDVKCPGCYKITTVFSHAQTVVLCVGCSTVLCQPTGGKARLT 90
Query: 259 EGCSF 273
EG SF
Sbjct: 91 EGISF 95
>AB007162-1|BAA25825.1| 69|Homo sapiens ribosomal protein S27
protein.
Length = 69
Score = 120 bits (288), Expect = 3e-27
Identities = 51/60 (85%), Positives = 55/60 (91%)
Frame = +1
Query: 79 ERRKHKLKRLVPHPNSYFMDVKCPGCYKITTVFSHAQRVVVCAGCSTILCQPTGGRARLT 258
E+RKHK KRLV PNSYFMDVKCPGCYKITTVFSHAQ VV+C GCST+LCQPTGG+ARLT
Sbjct: 10 EKRKHKKKRLVQSPNSYFMDVKCPGCYKITTVFSHAQTVVLCVGCSTVLCQPTGGKARLT 69
>AL358472-18|CAI14032.1| 66|Homo sapiens ribosomal protein S27
(metallopanstimulin 1) protein.
Length = 66
Score = 50.8 bits (116), Expect = 2e-06
Identities = 21/25 (84%), Positives = 22/25 (88%)
Frame = +1
Query: 79 ERRKHKLKRLVPHPNSYFMDVKCPG 153
E+RKHK KRLV PNSYFMDVKCPG
Sbjct: 15 EKRKHKKKRLVQSPNSYFMDVKCPG 39
>BC007355-1|AAH07355.1| 287|Homo sapiens solute carrier family 25
(mitochondrial carrier; dicarboxylate transporter), me
protein.
Length = 287
Score = 28.7 bits (61), Expect = 8.7
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = +1
Query: 157 YKITTVFSHAQRVVVCAGCSTILCQP 234
Y +F+H + GC+T LCQP
Sbjct: 194 YLSDNIFTHFVASFIAGGCATFLCQP 219
>AK075249-1|BAC11497.1| 287|Homo sapiens protein ( Homo sapiens
cDNA FLJ90768 fis, clone THYRO1000795, highly similar to
Mitochondrial dicarboxylate carrier. ).
Length = 287
Score = 28.7 bits (61), Expect = 8.7
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = +1
Query: 157 YKITTVFSHAQRVVVCAGCSTILCQP 234
Y +F+H + GC+T LCQP
Sbjct: 194 YLSDNIFTHFVASFIAGGCATFLCQP 219
>AJ131613-1|CAB59892.1| 287|Homo sapiens dicarboxylate carrier
protein protein.
Length = 287
Score = 28.7 bits (61), Expect = 8.7
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = +1
Query: 157 YKITTVFSHAQRVVVCAGCSTILCQP 234
Y +F+H + GC+T LCQP
Sbjct: 194 YLSDNIFTHFVASFIAGGCATFLCQP 219
>AJ131612-1|CAB60007.1| 287|Homo sapiens dicarboxylate carrier
protein protein.
Length = 287
Score = 28.7 bits (61), Expect = 8.7
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = +1
Query: 157 YKITTVFSHAQRVVVCAGCSTILCQP 234
Y +F+H + GC+T LCQP
Sbjct: 194 YLSDNIFTHFVASFIAGGCATFLCQP 219
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 60,401,219
Number of Sequences: 237096
Number of extensions: 1123795
Number of successful extensions: 1756
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1730
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1756
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3316445452
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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