Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP13_F_D02
         (491 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U97407-1|AAB52478.2|  411|Caenorhabditis elegans Hypothetical pr...    29   1.4  
U50300-4|AAC48111.1|  351|Caenorhabditis elegans Serpentine rece...    28   4.2  
AC024801-7|AAK95892.2|  606|Caenorhabditis elegans Hypothetical ...    27   5.6  
Z72502-2|CAA96588.1|  423|Caenorhabditis elegans Hypothetical pr...    27   7.4  
U40028-4|AAA81115.1|  758|Caenorhabditis elegans Hypothetical pr...    27   7.4  
AF016450-12|AAB65989.1|  278|Caenorhabditis elegans Hypothetical...    27   7.4  
Z81497-6|CAB04082.2|  604|Caenorhabditis elegans Hypothetical pr...    27   9.8  
Z75953-5|CAB00102.2|  604|Caenorhabditis elegans Hypothetical pr...    27   9.8  

>U97407-1|AAB52478.2|  411|Caenorhabditis elegans Hypothetical
           protein C34G6.5 protein.
          Length = 411

 Score = 29.5 bits (63), Expect = 1.4
 Identities = 13/37 (35%), Positives = 23/37 (62%)
 Frame = -2

Query: 322 FLRSFRNDRVLLNEGAFGFVISQRTKSTRYNRAIISV 212
           F R ++    ++ EG+FG VIS   ++T+  RAI ++
Sbjct: 23  FQRKYQLQENIIGEGSFGTVISATCRTTQEKRAIKAI 59


>U50300-4|AAC48111.1|  351|Caenorhabditis elegans Serpentine
           receptor, class h protein201 protein.
          Length = 351

 Score = 27.9 bits (59), Expect = 4.2
 Identities = 11/22 (50%), Positives = 16/22 (72%)
 Frame = -2

Query: 235 YNRAIISVLLHSGSHHNFSRTL 170
           YN+AI+++L  +GS H F  TL
Sbjct: 281 YNQAIVNILFINGSMHGFVSTL 302


>AC024801-7|AAK95892.2|  606|Caenorhabditis elegans Hypothetical
           protein Y50D7A.2 protein.
          Length = 606

 Score = 27.5 bits (58), Expect = 5.6
 Identities = 10/31 (32%), Positives = 15/31 (48%)
 Frame = +2

Query: 221 YCPIISRGFRSLGNDETKCPFIQQNSIISEA 313
           +CP      RSLG ++  CP+      I+ A
Sbjct: 21  FCPNFQEDLRSLGREKKICPYFTARQAINRA 51


>Z72502-2|CAA96588.1|  423|Caenorhabditis elegans Hypothetical
           protein C08B6.5 protein.
          Length = 423

 Score = 27.1 bits (57), Expect = 7.4
 Identities = 13/37 (35%), Positives = 21/37 (56%)
 Frame = -2

Query: 319 LRSFRNDRVLLNEGAFGFVISQRTKSTRYNRAIISVL 209
           L   R+   +L+  AFGF IS R     +N+A++ +L
Sbjct: 294 LTVIRDTSGILSYVAFGFSISNRKLCQMFNKALLKIL 330


>U40028-4|AAA81115.1|  758|Caenorhabditis elegans Hypothetical
           protein T05A7.6 protein.
          Length = 758

 Score = 27.1 bits (57), Expect = 7.4
 Identities = 17/36 (47%), Positives = 21/36 (58%)
 Frame = +1

Query: 112 VIDYIKIVKCLVRFLGSLNQAFVKNYGATLNEAVRK 219
           +I+Y  IVK  V FL       V  YGATLNE ++K
Sbjct: 163 MIEYGSIVKDKVEFL------IVSPYGATLNEIMKK 192


>AF016450-12|AAB65989.1|  278|Caenorhabditis elegans Hypothetical
           protein B0238.10 protein.
          Length = 278

 Score = 27.1 bits (57), Expect = 7.4
 Identities = 15/46 (32%), Positives = 25/46 (54%), Gaps = 5/46 (10%)
 Frame = +2

Query: 260 NDETKCPFIQ-----QNSIISEAPKEMTEDIAEPATPYHYENFFHD 382
           NDE   P I+       S I++  + +T+D++EP + Y Y  F H+
Sbjct: 87  NDELASPNIRIVAYKDESQINDIMRLITKDLSEPYSIYTYRYFLHN 132


>Z81497-6|CAB04082.2|  604|Caenorhabditis elegans Hypothetical
           protein F10C2.3 protein.
          Length = 604

 Score = 26.6 bits (56), Expect = 9.8
 Identities = 11/32 (34%), Positives = 19/32 (59%)
 Frame = -2

Query: 253 RTKSTRYNRAIISVLLHSGSHHNFSRTLGSTI 158
           R++      ++I ++L S SH NF RT+  T+
Sbjct: 173 RSQPVSDKSSVIVIVLDSVSHSNFRRTMNKTL 204


>Z75953-5|CAB00102.2|  604|Caenorhabditis elegans Hypothetical
           protein F10C2.3 protein.
          Length = 604

 Score = 26.6 bits (56), Expect = 9.8
 Identities = 11/32 (34%), Positives = 19/32 (59%)
 Frame = -2

Query: 253 RTKSTRYNRAIISVLLHSGSHHNFSRTLGSTI 158
           R++      ++I ++L S SH NF RT+  T+
Sbjct: 173 RSQPVSDKSSVIVIVLDSVSHSNFRRTMNKTL 204


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,264,647
Number of Sequences: 27780
Number of extensions: 225825
Number of successful extensions: 651
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 638
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 651
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 924715866
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)