Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP13_F_C07
(477 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC3C7.11c |cnx1|cal1, cal1|calnexin |Schizosaccharomyces pombe... 58 5e-10
SPAP11E10.02c |mam3|SPAPB1A10.01c|cell agglutination protein Mam... 36 0.003
SPBP4H10.19c |||calreticulin/calnexin homolog|Schizosaccharomyce... 33 0.017
SPCC4G3.12c |||ubiquitin-protein ligase E3 |Schizosaccharomyces ... 29 0.28
SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 28 0.84
SPAC1486.10 |thi1|ntf1, SPAC6G10.01|transcription factor Thi1|Sc... 26 2.6
SPAC31G5.19 |||ATPase with bromodomain protein|Schizosaccharomyc... 26 2.6
SPCC11E10.08 |rik1||silencing protein Rik1|Schizosaccharomyces p... 26 3.4
SPBC215.15 |sec13||COPII-coated vesicle component Sec13|Schizosa... 26 3.4
SPCC1672.11c |||P-type ATPase |Schizosaccharomyces pombe|chr 3||... 25 4.5
SPAC11G7.01 |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 25 4.5
SPCC1020.02 |spc7||kinetochore protein Spc7|Schizosaccharomyces ... 25 4.5
SPAC20G8.02 |||phospholipase|Schizosaccharomyces pombe|chr 1|||M... 25 5.9
SPBP19A11.02c |||sequence orphan|Schizosaccharomyces pombe|chr 2... 25 5.9
SPAC11E3.01c |swr1|SPAC2H10.03c|SNF2 family helicase Swr1|Schizo... 25 5.9
SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual 25 5.9
SPCP1E11.05c |||sterol O-acyltransferase |Schizosaccharomyces po... 25 7.9
SPCC4F11.03c |||sequence orphan|Schizosaccharomyces pombe|chr 3|... 25 7.9
SPBC1A4.04 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 25 7.9
SPBC1E8.05 |||conserved fungal protein|Schizosaccharomyces pombe... 25 7.9
>SPAC3C7.11c |cnx1|cal1, cal1|calnexin |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 560
Score = 58.4 bits (135), Expect = 5e-10
Identities = 30/77 (38%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Frame = +1
Query: 238 DKGLKTSEDARFYALSRKF-KPFSNEGKPLVVQFTVKHEQDIDCGGGYLKVFDCXLXXKD 414
+ GL ++A +A+S +F +P + K LVVQ+ V E+ ++CGG YLK+ +
Sbjct: 89 EAGLVMKDEAAHHAISYEFDEPINEPEKDLVVQYEVNPEEGLNCGGAYLKLL-AEPTHGE 147
Query: 415 MHGETPYXIMFGPDICG 465
M Y IMFGPD CG
Sbjct: 148 MSNSIDYRIMFGPDKCG 164
>SPAP11E10.02c |mam3|SPAPB1A10.01c|cell agglutination protein
Mam3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1082
Score = 35.9 bits (79), Expect = 0.003
Identities = 26/72 (36%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Frame = -2
Query: 272 NLASSEVFKPLSSSGSLKNFPAVNLNFPNSFPGCSLYTQLLSHE-SSGNFSSKNTSQFIE 96
N SSE F S+S SL P VN + S + ++ L S + S+ NF+S ++S +
Sbjct: 475 NYTSSEAF---STSSSLVVIPPVNSSLVTSSTSFTKFSSLSSSQLSTENFTSASSSLSLT 531
Query: 95 DNASKLTTTSTT 60
+ S L+T STT
Sbjct: 532 NAKSSLSTPSTT 543
>SPBP4H10.19c |||calreticulin/calnexin homolog|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 381
Score = 33.5 bits (73), Expect = 0.017
Identities = 33/122 (27%), Positives = 51/122 (41%), Gaps = 6/122 (4%)
Frame = +1
Query: 118 FEEKFPDD---SWESNWVYSEHPGKEFGKFKLTAGKFFSDPEDDKGLKTSEDARFYAL-S 285
F E+F + +W S W K+ G + L S D+ GL T + + + L S
Sbjct: 33 FSEQFTSEDITTWRSRW--RAPVNKDLGVWDLVEAPG-SHLRDEYGLITLKSNKPHILIS 89
Query: 286 RKFKPFSNEGK--PLVVQFTVKHEQDIDCGGGYLKVFDCXLXXKDMHGETPYXIMFGPDI 459
P + + P+V+ F VK + CG Y+ + K++ E P I FG
Sbjct: 90 NLENPTTRQSSSVPIVLSFQVKPTKPWTCGHAYVSLVH-QSNPKNVSKEPPSVIRFGVKK 148
Query: 460 CG 465
CG
Sbjct: 149 CG 150
>SPCC4G3.12c |||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 821
Score = 29.5 bits (63), Expect = 0.28
Identities = 22/68 (32%), Positives = 27/68 (39%), Gaps = 4/68 (5%)
Frame = -2
Query: 203 NLNFPNSFPGCSLYTQLLSHESSGNFSSKNTSQFIEDNASKLTT----TSTTAFIFDSQY 36
N N F + + S +SGNFS T Q DN S +T ST F S
Sbjct: 575 NSNSQRPFSTVPSESNVFSRNASGNFSMSQTHQPTTDNTSSFSTQPGRLSTGLHHFPSDR 634
Query: 35 HLLQTKDR 12
LL + R
Sbjct: 635 DLLSNQTR 642
>SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 534
Score = 27.9 bits (59), Expect = 0.84
Identities = 33/137 (24%), Positives = 59/137 (43%)
Frame = -2
Query: 464 PQMSGPNIXSYGVSPCMSXXSSXQSKTLRYPPPQSMSCSCLTVNWTTKGLPSLLNGLNLR 285
P S I S SP S SS S + S S + + + T+ + + + R
Sbjct: 336 PTSSSSTISSSSSSPSSSSFSSTTSSS---KSSSSFSSTVSSSSSTSSSTLTSSSSSSSR 392
Query: 284 ERA*NLASSEVFKPLSSSGSLKNFPAVNLNFPNSFPGCSLYTQLLSHESSGNFSSKNTSQ 105
+ + SS + SSS S + V+ F ++ S ++ SH SS + SS ++
Sbjct: 393 PASSSSHSSSLSSHKSSSSSKSSSAPVSSAFYHN----STSSRSSSHSSSHSLSSLSSKP 448
Query: 104 FIEDNASKLTTTSTTAF 54
+ ++S L T+S+ +
Sbjct: 449 ILTASSSSLLTSSSHTY 465
>SPAC1486.10 |thi1|ntf1, SPAC6G10.01|transcription factor
Thi1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 775
Score = 26.2 bits (55), Expect = 2.6
Identities = 10/32 (31%), Positives = 18/32 (56%)
Frame = -2
Query: 272 NLASSEVFKPLSSSGSLKNFPAVNLNFPNSFP 177
N +E F+P + SL N P +N ++ ++ P
Sbjct: 685 NSTPNEAFQPFDQTSSLYNVPGLNKSYVSNQP 716
>SPAC31G5.19 |||ATPase with bromodomain protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1190
Score = 26.2 bits (55), Expect = 2.6
Identities = 12/48 (25%), Positives = 24/48 (50%)
Frame = +1
Query: 124 EKFPDDSWESNWVYSEHPGKEFGKFKLTAGKFFSDPEDDKGLKTSEDA 267
+ F +D + +W EH K ++ + + FS+ DD+ + SE +
Sbjct: 49 QAFQEDEGDEDWEEEEHKPKAKRRYNTRSNESFSE-GDDEPFEVSESS 95
>SPCC11E10.08 |rik1||silencing protein Rik1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1040
Score = 25.8 bits (54), Expect = 3.4
Identities = 18/58 (31%), Positives = 31/58 (53%), Gaps = 4/58 (6%)
Frame = -2
Query: 296 LNLRERA*NLASSEV----FKPLSSSGSLKNFPAVNLNFPNSFPGCSLYTQLLSHESS 135
++LR RA L+ E+ + LS+ LK +++ FP SFP +Y + ++SS
Sbjct: 121 VDLRMRAIFLSIDEISMICIRILSAEERLKTGRSIDSGFPFSFPVHLIYDMCILNDSS 178
>SPBC215.15 |sec13||COPII-coated vesicle component
Sec13|Schizosaccharomyces pombe|chr 2|||Manual
Length = 297
Score = 25.8 bits (54), Expect = 3.4
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = +1
Query: 121 EEKFPDDSWESNWVYS 168
EEKFPD +W +W S
Sbjct: 251 EEKFPDIAWRVSWSLS 266
>SPCC1672.11c |||P-type ATPase |Schizosaccharomyces pombe|chr
3|||Manual
Length = 1315
Score = 25.4 bits (53), Expect = 4.5
Identities = 12/31 (38%), Positives = 14/31 (45%)
Frame = -3
Query: 166 CTPNCFPTNHQETSPQRIHHNLSKIMPAS*Q 74
C P FP N+QE H+ I AS Q
Sbjct: 791 CKPESFPANYQEVLDYYTHNGFRVIACASKQ 821
>SPAC11G7.01 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 536
Score = 25.4 bits (53), Expect = 4.5
Identities = 33/131 (25%), Positives = 54/131 (41%)
Frame = -2
Query: 413 SXXSSXQSKTLRYPPPQSMSCSCLTVNWTTKGLPSLLNGLNLRERA*NLASSEVFKPLSS 234
S +S S P S S + T ++ +PS + + A ++SS PLSS
Sbjct: 9 SVDTSLSSSASSSIPASSSSAAASTSLSSSSVIPSSSSSMLSSSSATAISSSSSSSPLSS 68
Query: 233 SGSLKNFPAVNLNFPNSFPGCSLYTQLLSHESSGNFSSKNTSQFIEDNASKLTTTSTTAF 54
S PA S T L+S SS SS +++ +++ LT++S+ +
Sbjct: 69 SSFTS--PA----------SSSFITSLVS--SSSQQSSSSSASLTSSSSATLTSSSSASP 114
Query: 53 IFDSQYHLLQT 21
S H L +
Sbjct: 115 TSSSSSHALSS 125
>SPCC1020.02 |spc7||kinetochore protein Spc7|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1364
Score = 25.4 bits (53), Expect = 4.5
Identities = 14/35 (40%), Positives = 17/35 (48%)
Frame = +1
Query: 208 AGKFFSDPEDDKGLKTSEDARFYALSRKFKPFSNE 312
A F S E KGL +SE Y+L P SN+
Sbjct: 263 ADSFLSHSESIKGLSSSEQGTVYSLKASHDP-SNQ 296
>SPAC20G8.02 |||phospholipase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 757
Score = 25.0 bits (52), Expect = 5.9
Identities = 14/47 (29%), Positives = 20/47 (42%)
Frame = +1
Query: 193 KFKLTAGKFFSDPEDDKGLKTSEDARFYALSRKFKPFSNEGKPLVVQ 333
K LT +S+ D G+ FY + P S +PLVV+
Sbjct: 578 KTNLTRSLSYSEQSFDSGVSILSCQNFYNIFHPTDPISYRVEPLVVK 624
>SPBP19A11.02c |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 244
Score = 25.0 bits (52), Expect = 5.9
Identities = 11/43 (25%), Positives = 21/43 (48%), Gaps = 3/43 (6%)
Frame = -3
Query: 148 PTNHQETS---PQRIHHNLSKIMPAS*QRPVQQLSFSIHSTTF 29
PT H T+ P H N + +P + + + ++ ++TTF
Sbjct: 136 PTTHVNTTTVVPPTTHANTTSFVPTTTESSIHPITTGFYNTTF 178
>SPAC11E3.01c |swr1|SPAC2H10.03c|SNF2 family helicase
Swr1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1288
Score = 25.0 bits (52), Expect = 5.9
Identities = 13/40 (32%), Positives = 15/40 (37%)
Frame = +1
Query: 250 KTSEDARFYALSRKFKPFSNEGKPLVVQFTVKHEQDIDCG 369
KT Y +SRK P L + F K DCG
Sbjct: 952 KTIPRDLLYEVSRKINPLHQASTRLAIAFPDKRLLQYDCG 991
>SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1236
Score = 25.0 bits (52), Expect = 5.9
Identities = 26/129 (20%), Positives = 52/129 (40%), Gaps = 1/129 (0%)
Frame = -2
Query: 425 SPCMSXXSSXQSKTLRYPPPQSMSCSCLTVNWTTKGLPSLLNGLNLRERA*NLASSEVFK 246
SP S SS S S S + ++ ++ +PS + ++ + + S
Sbjct: 533 SPMTSVLSSSSSIPTSSSSDFSSSITTISSGISSSSIPSTFSSVSSILSSSTSSPSSTSL 592
Query: 245 PLSSSGSLKNFPAVNLNFPNSF-PGCSLYTQLLSHESSGNFSSKNTSQFIEDNASKLTTT 69
+SSS + F + + + P+S S + +LS + S +S I +S + ++
Sbjct: 593 SISSSSTSSTFSSASTSSPSSISSSISSSSTILSSPTPSTSSLMISSSSIISGSSSILSS 652
Query: 68 STTAFIFDS 42
S + S
Sbjct: 653 SISTIPISS 661
>SPCP1E11.05c |||sterol O-acyltransferase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 472
Score = 24.6 bits (51), Expect = 7.9
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = -1
Query: 318 FTLITERFELTGESIEPRIFRGFQT 244
F E FELTG + IF+ FQ+
Sbjct: 77 FMSFLENFELTGRPVVGTIFKYFQS 101
>SPCC4F11.03c |||sequence orphan|Schizosaccharomyces pombe|chr
3|||Manual
Length = 335
Score = 24.6 bits (51), Expect = 7.9
Identities = 11/36 (30%), Positives = 19/36 (52%)
Frame = -2
Query: 191 PNSFPGCSLYTQLLSHESSGNFSSKNTSQFIEDNAS 84
PN P ++ Q ++ ++S F N S ++ DN S
Sbjct: 169 PNMPPKTTVNDQDVTKDASQQFGGSNFSNYLRDNDS 204
>SPBC1A4.04 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 249
Score = 24.6 bits (51), Expect = 7.9
Identities = 23/77 (29%), Positives = 37/77 (48%)
Frame = -2
Query: 272 NLASSEVFKPLSSSGSLKNFPAVNLNFPNSFPGCSLYTQLLSHESSGNFSSKNTSQFIED 93
N ASS V + S + NF F N P SL Q L+ S+ S ++T ++
Sbjct: 106 NFASSSVTSAPTQSSHISNFTNSQKYFANDLPN-SLTDQPLAQPSA---SQRST--WLPC 159
Query: 92 NASKLTTTSTTAFIFDS 42
+A+ T++ ++ FDS
Sbjct: 160 SAAVSTSSPSSDPFFDS 176
>SPBC1E8.05 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 317
Score = 24.6 bits (51), Expect = 7.9
Identities = 20/100 (20%), Positives = 47/100 (47%)
Frame = -2
Query: 356 SCSCLTVNWTTKGLPSLLNGLNLRERA*NLASSEVFKPLSSSGSLKNFPAVNLNFPNSFP 177
+CS T++ ++ ++ ++ +S + SSS + P+ + + +S P
Sbjct: 110 ACSTCTISTSSLSYSGTISSTSIAPSMIGTRTSSSYFITSSSST----PSSSSSSSSSSP 165
Query: 176 GCSLYTQLLSHESSGNFSSKNTSQFIEDNASKLTTTSTTA 57
S S +SS + SS + S ++SK +++S+++
Sbjct: 166 SSSSSKSSSSSKSSSSSSSSSKSSSSSSSSSKSSSSSSSS 205
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,052,150
Number of Sequences: 5004
Number of extensions: 41173
Number of successful extensions: 143
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 138
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 142
length of database: 2,362,478
effective HSP length: 67
effective length of database: 2,027,210
effective search space used: 184476110
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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