Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP13_F_C07
(477 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X59589-1|CAA42159.1| 395|Caenorhabditis elegans calreticulin pr... 164 3e-41
AF125963-7|AAD14746.1| 395|Caenorhabditis elegans Calreticulin ... 164 3e-41
Z22181-5|CAA80183.1| 619|Caenorhabditis elegans Hypothetical pr... 62 2e-10
U58751-10|AAB00661.1| 205|Caenorhabditis elegans Hypothetical p... 28 4.0
AY349016-1|AAQ55496.1| 394|Caenorhabditis elegans NHR-41 protein. 27 5.3
AY349015-1|AAQ55495.1| 459|Caenorhabditis elegans NHR-41B protein. 27 5.3
AY349014-1|AAQ55494.1| 583|Caenorhabditis elegans NHR-41A protein. 27 5.3
Z81526-1|CAB04264.1| 816|Caenorhabditis elegans Hypothetical pr... 27 7.0
Z29094-14|CAJ43434.1| 893|Caenorhabditis elegans Hypothetical p... 27 7.0
Z29094-10|CAD45580.2| 965|Caenorhabditis elegans Hypothetical p... 27 7.0
Z29094-9|CAA82347.3| 960|Caenorhabditis elegans Hypothetical pr... 27 7.0
AY450852-1|AAR18092.1| 960|Caenorhabditis elegans Tousled-like ... 27 7.0
Z81553-1|CAB04490.2| 327|Caenorhabditis elegans Hypothetical pr... 27 9.2
U80451-1|AAB37835.1| 591|Caenorhabditis elegans Dnaj domain (pr... 27 9.2
>X59589-1|CAA42159.1| 395|Caenorhabditis elegans calreticulin
protein.
Length = 395
Score = 164 bits (398), Expect = 3e-41
Identities = 72/124 (58%), Positives = 93/124 (75%), Gaps = 1/124 (0%)
Frame = +1
Query: 100 INCDVFFEEKFPDDSWESNWVYSEHPGKEFGKFKLTAGKFFSDPEDDKGLKTSEDARFYA 279
++ +V+F+E+F D SWE WV S+H +FG FKL+AGKFF D+G++TS+DA+FY+
Sbjct: 13 VSAEVYFKEEFNDASWEKRWVQSKHKD-DFGAFKLSAGKFFDVESRDQGIQTSQDAKFYS 71
Query: 280 LSRKF-KPFSNEGKPLVVQFTVKHEQDIDCGGGYLKVFDCXLXXKDMHGETPYXIMFGPD 456
+ KF K FSN+GK LV+Q+TVKHEQ IDCGGGY+KV D HGETPY +MFGPD
Sbjct: 72 RAAKFDKDFSNKGKTLVIQYTVKHEQGIDCGGGYVKVMRADADLGDFHGETPYNVMFGPD 131
Query: 457 ICGP 468
ICGP
Sbjct: 132 ICGP 135
>AF125963-7|AAD14746.1| 395|Caenorhabditis elegans Calreticulin
protein 1 protein.
Length = 395
Score = 164 bits (398), Expect = 3e-41
Identities = 72/124 (58%), Positives = 93/124 (75%), Gaps = 1/124 (0%)
Frame = +1
Query: 100 INCDVFFEEKFPDDSWESNWVYSEHPGKEFGKFKLTAGKFFSDPEDDKGLKTSEDARFYA 279
++ +V+F+E+F D SWE WV S+H +FG FKL+AGKFF D+G++TS+DA+FY+
Sbjct: 13 VSAEVYFKEEFNDASWEKRWVQSKHKD-DFGAFKLSAGKFFDVESRDQGIQTSQDAKFYS 71
Query: 280 LSRKF-KPFSNEGKPLVVQFTVKHEQDIDCGGGYLKVFDCXLXXKDMHGETPYXIMFGPD 456
+ KF K FSN+GK LV+Q+TVKHEQ IDCGGGY+KV D HGETPY +MFGPD
Sbjct: 72 RAAKFDKDFSNKGKTLVIQYTVKHEQGIDCGGGYVKVMRADADLGDFHGETPYNVMFGPD 131
Query: 457 ICGP 468
ICGP
Sbjct: 132 ICGP 135
>Z22181-5|CAA80183.1| 619|Caenorhabditis elegans Hypothetical
protein ZK632.6 protein.
Length = 619
Score = 62.1 bits (144), Expect = 2e-10
Identities = 32/81 (39%), Positives = 44/81 (54%), Gaps = 3/81 (3%)
Frame = +1
Query: 232 EDDKGLKTSEDARFYALSRKFK-PFSNEGKPLVVQFTVKHEQDIDCGGGYLKVFD--CXL 402
E D GL AR +A++ K PF+ + VVQ+ +K E+ +CGGGYLK+
Sbjct: 107 EGDLGLIVKTKARHHAIAAKLNTPFAFDANTFVVQYDIKFEEGQECGGGYLKLLSEGAEK 166
Query: 403 XXKDMHGETPYXIMFGPDICG 465
+ +T Y IMFGPD CG
Sbjct: 167 DLANFQDKTAYTIMFGPDKCG 187
>U58751-10|AAB00661.1| 205|Caenorhabditis elegans Hypothetical
protein C07G1.7 protein.
Length = 205
Score = 27.9 bits (59), Expect = 4.0
Identities = 12/41 (29%), Positives = 21/41 (51%)
Frame = -1
Query: 387 DLEVSASTVNVLFMFDSELDYQGFTLITERFELTGESIEPR 265
D E + +L D ++DY+ F + E+F G+S+ R
Sbjct: 130 DRETCEENIKILQREDRDVDYREFLTMAEKFNEEGQSLWAR 170
>AY349016-1|AAQ55496.1| 394|Caenorhabditis elegans NHR-41 protein.
Length = 394
Score = 27.5 bits (58), Expect = 5.3
Identities = 22/82 (26%), Positives = 45/82 (54%), Gaps = 1/82 (1%)
Frame = -2
Query: 338 VNWTTKGLPSLLNGLNLRERA*NLASSEVFKPLSSSGSLKNFPA-VNLNFPNSFPGCSLY 162
+++T + LPS + R +AS E+F+ +SSS S +N + ++N +S +
Sbjct: 245 ISFTAQDLPSSMASPETRS-VNQMASQELFEYVSSSKSTQNHMSNEHINVDDSTSEDN-D 302
Query: 161 TQLLSHESSGNFSSKNTSQFIE 96
T + S +SS N +++ S+ ++
Sbjct: 303 THVTSQQSSVNIAAERFSRILQ 324
>AY349015-1|AAQ55495.1| 459|Caenorhabditis elegans NHR-41B protein.
Length = 459
Score = 27.5 bits (58), Expect = 5.3
Identities = 22/82 (26%), Positives = 45/82 (54%), Gaps = 1/82 (1%)
Frame = -2
Query: 338 VNWTTKGLPSLLNGLNLRERA*NLASSEVFKPLSSSGSLKNFPA-VNLNFPNSFPGCSLY 162
+++T + LPS + R +AS E+F+ +SSS S +N + ++N +S +
Sbjct: 342 ISFTAQDLPSSMASPETRS-VNQMASQELFEYVSSSKSTQNHMSNEHINVDDSTSEDN-D 399
Query: 161 TQLLSHESSGNFSSKNTSQFIE 96
T + S +SS N +++ S+ ++
Sbjct: 400 THVTSQQSSVNIAAERFSRILQ 421
>AY349014-1|AAQ55494.1| 583|Caenorhabditis elegans NHR-41A protein.
Length = 583
Score = 27.5 bits (58), Expect = 5.3
Identities = 22/82 (26%), Positives = 45/82 (54%), Gaps = 1/82 (1%)
Frame = -2
Query: 338 VNWTTKGLPSLLNGLNLRERA*NLASSEVFKPLSSSGSLKNFPA-VNLNFPNSFPGCSLY 162
+++T + LPS + R +AS E+F+ +SSS S +N + ++N +S +
Sbjct: 466 ISFTAQDLPSSMASPETRS-VNQMASQELFEYVSSSKSTQNHMSNEHINVDDSTSEDN-D 523
Query: 161 TQLLSHESSGNFSSKNTSQFIE 96
T + S +SS N +++ S+ ++
Sbjct: 524 THVTSQQSSVNIAAERFSRILQ 545
>Z81526-1|CAB04264.1| 816|Caenorhabditis elegans Hypothetical
protein F33H2.2 protein.
Length = 816
Score = 27.1 bits (57), Expect = 7.0
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = -2
Query: 146 HESSGNFSSKNTSQFIEDNASKLTTTSTTAFIFDS 42
+ S +F S +TSQ D + T + AFIFDS
Sbjct: 376 NNSVESFQSLSTSQTASDLSGSSGTVNRAAFIFDS 410
>Z29094-14|CAJ43434.1| 893|Caenorhabditis elegans Hypothetical
protein C07A9.3c protein.
Length = 893
Score = 27.1 bits (57), Expect = 7.0
Identities = 18/65 (27%), Positives = 25/65 (38%)
Frame = -2
Query: 236 SSGSLKNFPAVNLNFPNSFPGCSLYTQLLSHESSGNFSSKNTSQFIEDNASKLTTTSTTA 57
+ GS K PAV N NS+ Q+ HE ++ T +N T T
Sbjct: 254 NQGSPKRQPAVQQNGSNSYDSQQQQPQMNQHEMQNSYWGVATPSLGVNNRGTPTPTQQQH 313
Query: 56 FIFDS 42
+ DS
Sbjct: 314 YSSDS 318
>Z29094-10|CAD45580.2| 965|Caenorhabditis elegans Hypothetical
protein C07A9.3b protein.
Length = 965
Score = 27.1 bits (57), Expect = 7.0
Identities = 18/65 (27%), Positives = 25/65 (38%)
Frame = -2
Query: 236 SSGSLKNFPAVNLNFPNSFPGCSLYTQLLSHESSGNFSSKNTSQFIEDNASKLTTTSTTA 57
+ GS K PAV N NS+ Q+ HE ++ T +N T T
Sbjct: 321 NQGSPKRQPAVQQNGSNSYDSQQQQPQMNQHEMQNSYWGVATPSLGVNNRGTPTPTQQQH 380
Query: 56 FIFDS 42
+ DS
Sbjct: 381 YSSDS 385
>Z29094-9|CAA82347.3| 960|Caenorhabditis elegans Hypothetical
protein C07A9.3a protein.
Length = 960
Score = 27.1 bits (57), Expect = 7.0
Identities = 18/65 (27%), Positives = 25/65 (38%)
Frame = -2
Query: 236 SSGSLKNFPAVNLNFPNSFPGCSLYTQLLSHESSGNFSSKNTSQFIEDNASKLTTTSTTA 57
+ GS K PAV N NS+ Q+ HE ++ T +N T T
Sbjct: 321 NQGSPKRQPAVQQNGSNSYDSQQQQPQMNQHEMQNSYWGVATPSLGVNNRGTPTPTQQQH 380
Query: 56 FIFDS 42
+ DS
Sbjct: 381 YSSDS 385
>AY450852-1|AAR18092.1| 960|Caenorhabditis elegans Tousled-like
kinase protein.
Length = 960
Score = 27.1 bits (57), Expect = 7.0
Identities = 18/65 (27%), Positives = 25/65 (38%)
Frame = -2
Query: 236 SSGSLKNFPAVNLNFPNSFPGCSLYTQLLSHESSGNFSSKNTSQFIEDNASKLTTTSTTA 57
+ GS K PAV N NS+ Q+ HE ++ T +N T T
Sbjct: 321 NQGSPKRQPAVQQNGSNSYDSQQQQPQMNQHEMQNSYWGVATPSLGVNNRGTPTPTQQQH 380
Query: 56 FIFDS 42
+ DS
Sbjct: 381 YSSDS 385
>Z81553-1|CAB04490.2| 327|Caenorhabditis elegans Hypothetical
protein F56H6.1 protein.
Length = 327
Score = 26.6 bits (56), Expect = 9.2
Identities = 16/44 (36%), Positives = 22/44 (50%)
Frame = +1
Query: 118 FEEKFPDDSWESNWVYSEHPGKEFGKFKLTAGKFFSDPEDDKGL 249
F EK D + + ++E G G+ AG F +D DDKGL
Sbjct: 218 FVEKLYHDEYTCPYDWAEDRG--MGRCMARAGIFPTDTRDDKGL 259
>U80451-1|AAB37835.1| 591|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 9 protein.
Length = 591
Score = 26.6 bits (56), Expect = 9.2
Identities = 13/46 (28%), Positives = 23/46 (50%)
Frame = -2
Query: 293 NLRERA*NLASSEVFKPLSSSGSLKNFPAVNLNFPNSFPGCSLYTQ 156
++ E + L + V +S L + ++ +F SFP C LYT+
Sbjct: 352 SITEMSVQLTTYGVNPAISMDRRLSRYSRISCSFHFSFPSCLLYTK 397
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,526,861
Number of Sequences: 27780
Number of extensions: 240129
Number of successful extensions: 704
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 660
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 699
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 871571276
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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