Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP13_F_C06
(647 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF125108-1|AAL75945.1| 96|Homo sapiens bithoraxoid-like protei... 125 1e-28
AL136173-3|CAI23309.1| 148|Homo sapiens dynein, light chain, ro... 112 1e-24
AL109923-4|CAI21457.1| 148|Homo sapiens dynein, light chain, ro... 112 1e-24
BC002481-1|AAH02481.1| 96|Homo sapiens dynein, light chain, ro... 111 3e-24
AY026513-1|AAK18712.1| 96|Homo sapiens dynein-associated prote... 111 3e-24
AL136173-2|CAI23308.1| 96|Homo sapiens dynein, light chain, ro... 111 3e-24
AL109923-3|CAI21456.1| 96|Homo sapiens dynein, light chain, ro... 111 3e-24
AF178431-1|AAK95342.1| 96|Homo sapiens BITH protein. 111 3e-24
AF165516-1|AAF86646.1| 96|Homo sapiens bithoraxoid-like protei... 111 3e-24
AF132750-1|AAL75951.1| 96|Homo sapiens bithoraxoid-like protei... 111 3e-24
BC054892-1|AAH54892.1| 54|Homo sapiens DYNLRB2 protein protein. 42 0.002
AL136173-1|CAM28343.1| 47|Homo sapiens dynein, light chain, ro... 42 0.002
AL109923-2|CAM28250.1| 47|Homo sapiens dynein, light chain, ro... 42 0.002
>AF125108-1|AAL75945.1| 96|Homo sapiens bithoraxoid-like protein
protein.
Length = 96
Score = 125 bits (302), Expect = 1e-28
Identities = 57/91 (62%), Positives = 79/91 (86%), Gaps = 4/91 (4%)
Frame = +1
Query: 73 EVEETIKRIQAHKGVMGVVIVNHEGIPIKSSLDNATSVLYAGLIGQLTEKA----RNVDS 240
EVEET+KRIQ+HKGV+G ++VN EGIPI+++LDN+T+V YAGL+ LT KA R++D
Sbjct: 3 EVEETLKRIQSHKGVIGTMVVNAEGIPIRTTLDNSTTVQYAGLLHHLTMKAKSTVRDIDP 62
Query: 241 TNELTFLRVRSRRHEILIAPDREFILIVIQN 333
N+LTFLR+RS++HEI++APD+E++LIVIQN
Sbjct: 63 QNDLTFLRIRSKKHEIMVAPDKEYLLIVIQN 93
>AL136173-3|CAI23309.1| 148|Homo sapiens dynein, light chain,
roadblock-type 1 protein.
Length = 148
Score = 112 bits (269), Expect = 1e-24
Identities = 51/100 (51%), Positives = 76/100 (76%), Gaps = 4/100 (4%)
Frame = +1
Query: 55 SYIMATEVEETIKRIQAHKGVMGVVIVNHEGIPIKSSLDNATSVLYAGLIGQLTEKA--- 225
S + EVEET+KR+Q+ KGV G+++VN EGIPIKS++DN T+ YA L+ KA
Sbjct: 49 SQLCEAEVEETLKRLQSQKGVQGIIVVNTEGIPIKSTMDNPTTTQYASLMHSFILKARST 108
Query: 226 -RNVDSTNELTFLRVRSRRHEILIAPDREFILIVIQNTSD 342
R++D N+LTFLR+RS+++EI++APD+++ LIVIQN ++
Sbjct: 109 VRDIDPQNDLTFLRIRSKKNEIMVAPDKDYFLIVIQNPTE 148
>AL109923-4|CAI21457.1| 148|Homo sapiens dynein, light chain,
roadblock-type 1 protein.
Length = 148
Score = 112 bits (269), Expect = 1e-24
Identities = 51/100 (51%), Positives = 76/100 (76%), Gaps = 4/100 (4%)
Frame = +1
Query: 55 SYIMATEVEETIKRIQAHKGVMGVVIVNHEGIPIKSSLDNATSVLYAGLIGQLTEKA--- 225
S + EVEET+KR+Q+ KGV G+++VN EGIPIKS++DN T+ YA L+ KA
Sbjct: 49 SQLCEAEVEETLKRLQSQKGVQGIIVVNTEGIPIKSTMDNPTTTQYASLMHSFILKARST 108
Query: 226 -RNVDSTNELTFLRVRSRRHEILIAPDREFILIVIQNTSD 342
R++D N+LTFLR+RS+++EI++APD+++ LIVIQN ++
Sbjct: 109 VRDIDPQNDLTFLRIRSKKNEIMVAPDKDYFLIVIQNPTE 148
>BC002481-1|AAH02481.1| 96|Homo sapiens dynein, light chain,
roadblock-type 1 protein.
Length = 96
Score = 111 bits (266), Expect = 3e-24
Identities = 50/94 (53%), Positives = 74/94 (78%), Gaps = 4/94 (4%)
Frame = +1
Query: 73 EVEETIKRIQAHKGVMGVVIVNHEGIPIKSSLDNATSVLYAGLIGQLTEKA----RNVDS 240
EVEET+KR+Q+ KGV G+++VN EGIPIKS++DN T+ YA L+ KA R++D
Sbjct: 3 EVEETLKRLQSQKGVQGIIVVNTEGIPIKSTMDNPTTTQYASLMHSFILKARSTVRDIDP 62
Query: 241 TNELTFLRVRSRRHEILIAPDREFILIVIQNTSD 342
N+LTFLR+RS+++EI++APD+++ LIVIQN ++
Sbjct: 63 QNDLTFLRIRSKKNEIMVAPDKDYFLIVIQNPTE 96
>AY026513-1|AAK18712.1| 96|Homo sapiens dynein-associated protein
HKM23 protein.
Length = 96
Score = 111 bits (266), Expect = 3e-24
Identities = 50/94 (53%), Positives = 74/94 (78%), Gaps = 4/94 (4%)
Frame = +1
Query: 73 EVEETIKRIQAHKGVMGVVIVNHEGIPIKSSLDNATSVLYAGLIGQLTEKA----RNVDS 240
EVEET+KR+Q+ KGV G+++VN EGIPIKS++DN T+ YA L+ KA R++D
Sbjct: 3 EVEETLKRLQSQKGVQGIIVVNTEGIPIKSTMDNPTTTQYASLMHSFILKARSTVRDIDP 62
Query: 241 TNELTFLRVRSRRHEILIAPDREFILIVIQNTSD 342
N+LTFLR+RS+++EI++APD+++ LIVIQN ++
Sbjct: 63 QNDLTFLRIRSKKNEIMVAPDKDYFLIVIQNPTE 96
>AL136173-2|CAI23308.1| 96|Homo sapiens dynein, light chain,
roadblock-type 1 protein.
Length = 96
Score = 111 bits (266), Expect = 3e-24
Identities = 50/94 (53%), Positives = 74/94 (78%), Gaps = 4/94 (4%)
Frame = +1
Query: 73 EVEETIKRIQAHKGVMGVVIVNHEGIPIKSSLDNATSVLYAGLIGQLTEKA----RNVDS 240
EVEET+KR+Q+ KGV G+++VN EGIPIKS++DN T+ YA L+ KA R++D
Sbjct: 3 EVEETLKRLQSQKGVQGIIVVNTEGIPIKSTMDNPTTTQYASLMHSFILKARSTVRDIDP 62
Query: 241 TNELTFLRVRSRRHEILIAPDREFILIVIQNTSD 342
N+LTFLR+RS+++EI++APD+++ LIVIQN ++
Sbjct: 63 QNDLTFLRIRSKKNEIMVAPDKDYFLIVIQNPTE 96
>AL109923-3|CAI21456.1| 96|Homo sapiens dynein, light chain,
roadblock-type 1 protein.
Length = 96
Score = 111 bits (266), Expect = 3e-24
Identities = 50/94 (53%), Positives = 74/94 (78%), Gaps = 4/94 (4%)
Frame = +1
Query: 73 EVEETIKRIQAHKGVMGVVIVNHEGIPIKSSLDNATSVLYAGLIGQLTEKA----RNVDS 240
EVEET+KR+Q+ KGV G+++VN EGIPIKS++DN T+ YA L+ KA R++D
Sbjct: 3 EVEETLKRLQSQKGVQGIIVVNTEGIPIKSTMDNPTTTQYASLMHSFILKARSTVRDIDP 62
Query: 241 TNELTFLRVRSRRHEILIAPDREFILIVIQNTSD 342
N+LTFLR+RS+++EI++APD+++ LIVIQN ++
Sbjct: 63 QNDLTFLRIRSKKNEIMVAPDKDYFLIVIQNPTE 96
>AF178431-1|AAK95342.1| 96|Homo sapiens BITH protein.
Length = 96
Score = 111 bits (266), Expect = 3e-24
Identities = 50/94 (53%), Positives = 74/94 (78%), Gaps = 4/94 (4%)
Frame = +1
Query: 73 EVEETIKRIQAHKGVMGVVIVNHEGIPIKSSLDNATSVLYAGLIGQLTEKA----RNVDS 240
EVEET+KR+Q+ KGV G+++VN EGIPIKS++DN T+ YA L+ KA R++D
Sbjct: 3 EVEETLKRLQSQKGVQGIIVVNTEGIPIKSTMDNPTTTQYASLMHSFILKARSTVRDIDP 62
Query: 241 TNELTFLRVRSRRHEILIAPDREFILIVIQNTSD 342
N+LTFLR+RS+++EI++APD+++ LIVIQN ++
Sbjct: 63 QNDLTFLRIRSKKNEIMVAPDKDYFLIVIQNPTE 96
>AF165516-1|AAF86646.1| 96|Homo sapiens bithoraxoid-like protein
protein.
Length = 96
Score = 111 bits (266), Expect = 3e-24
Identities = 50/94 (53%), Positives = 74/94 (78%), Gaps = 4/94 (4%)
Frame = +1
Query: 73 EVEETIKRIQAHKGVMGVVIVNHEGIPIKSSLDNATSVLYAGLIGQLTEKA----RNVDS 240
EVEET+KR+Q+ KGV G+++VN EGIPIKS++DN T+ YA L+ KA R++D
Sbjct: 3 EVEETLKRLQSQKGVQGIIVVNTEGIPIKSTMDNPTTTQYASLMHSFILKARSTVRDIDP 62
Query: 241 TNELTFLRVRSRRHEILIAPDREFILIVIQNTSD 342
N+LTFLR+RS+++EI++APD+++ LIVIQN ++
Sbjct: 63 QNDLTFLRIRSKKNEIMVAPDKDYFLIVIQNPTE 96
>AF132750-1|AAL75951.1| 96|Homo sapiens bithoraxoid-like protein
protein.
Length = 96
Score = 111 bits (266), Expect = 3e-24
Identities = 50/94 (53%), Positives = 74/94 (78%), Gaps = 4/94 (4%)
Frame = +1
Query: 73 EVEETIKRIQAHKGVMGVVIVNHEGIPIKSSLDNATSVLYAGLIGQLTEKA----RNVDS 240
EVEET+KR+Q+ KGV G+++VN EGIPIKS++DN T+ YA L+ KA R++D
Sbjct: 3 EVEETLKRLQSQKGVQGIIVVNTEGIPIKSTMDNPTTTQYASLMHSFILKARSTVRDIDP 62
Query: 241 TNELTFLRVRSRRHEILIAPDREFILIVIQNTSD 342
N+LTFLR+RS+++EI++APD+++ LIVIQN ++
Sbjct: 63 QNDLTFLRIRSKKNEIMVAPDKDYFLIVIQNPTE 96
>BC054892-1|AAH54892.1| 54|Homo sapiens DYNLRB2 protein protein.
Length = 54
Score = 41.5 bits (93), Expect = 0.002
Identities = 17/24 (70%), Positives = 22/24 (91%)
Frame = +1
Query: 73 EVEETIKRIQAHKGVMGVVIVNHE 144
EVEET+KRIQ+HKGV+G ++VN E
Sbjct: 3 EVEETLKRIQSHKGVIGTMVVNAE 26
>AL136173-1|CAM28343.1| 47|Homo sapiens dynein, light chain,
roadblock-type 1 protein.
Length = 47
Score = 41.5 bits (93), Expect = 0.002
Identities = 16/25 (64%), Positives = 22/25 (88%)
Frame = +1
Query: 73 EVEETIKRIQAHKGVMGVVIVNHEG 147
EVEET+KR+Q+ KGV G+++VN EG
Sbjct: 3 EVEETLKRLQSQKGVQGIIVVNTEG 27
>AL109923-2|CAM28250.1| 47|Homo sapiens dynein, light chain,
roadblock-type 1 protein.
Length = 47
Score = 41.5 bits (93), Expect = 0.002
Identities = 16/25 (64%), Positives = 22/25 (88%)
Frame = +1
Query: 73 EVEETIKRIQAHKGVMGVVIVNHEG 147
EVEET+KR+Q+ KGV G+++VN EG
Sbjct: 3 EVEETLKRLQSQKGVQGIIVVNTEG 27
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 90,277,068
Number of Sequences: 237096
Number of extensions: 2004970
Number of successful extensions: 3500
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 3400
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3490
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7197658880
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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