Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP13_F_B23
(649 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X13382-1|CAA31759.1| 407|Drosophila melanogaster protein ( Dros... 221 7e-58
BT025959-1|ABG02203.1| 233|Drosophila melanogaster IP15855p pro... 221 7e-58
AY069485-1|AAL39630.1| 401|Drosophila melanogaster LD21756p pro... 221 7e-58
AE014297-4196|AAG22173.1| 401|Drosophila melanogaster CG5502-PA... 221 7e-58
X06881-1|CAA29998.1| 123|Drosophila melanogaster protein ( Dros... 172 3e-43
BT010233-1|AAQ23551.1| 947|Drosophila melanogaster RE59472p pro... 31 1.3
BT003626-1|AAO39629.1| 947|Drosophila melanogaster GH01416p pro... 31 1.3
AY166752-1|AAN85714.1| 1400|Drosophila melanogaster loechrig iso... 31 1.3
AY070541-1|AAL48012.1| 1400|Drosophila melanogaster LD22662p pro... 31 1.3
AE014297-2948|AAF55864.2| 1400|Drosophila melanogaster CG17299-P... 31 1.3
AE014297-2944|AAF55860.2| 947|Drosophila melanogaster CG17299-P... 31 1.3
AE014297-2943|AAN13851.1| 947|Drosophila melanogaster CG17299-P... 31 1.3
AY113210-1|AAM29215.1| 872|Drosophila melanogaster AT06220p pro... 31 1.8
AE014296-2188|AAF49882.2| 271|Drosophila melanogaster CG17666-P... 31 1.8
AE014296-2187|AAN11857.1| 872|Drosophila melanogaster CG17666-P... 31 1.8
S61883-1|AAB26991.2| 2068|Drosophila melanogaster transcription ... 30 2.4
BT024196-1|ABC86258.1| 1964|Drosophila melanogaster RE63802p pro... 30 2.4
BT004888-1|AAO47866.1| 2096|Drosophila melanogaster RE74933p pro... 30 2.4
AE014297-491|AAF54102.3| 2065|Drosophila melanogaster CG17603-PA... 30 2.4
AE014297-490|AAS65117.1| 2098|Drosophila melanogaster CG17603-PC... 30 2.4
AE014297-489|AAS65116.1| 2129|Drosophila melanogaster CG17603-PB... 30 2.4
AE001572-25|AAD19815.1| 2065|Drosophila melanogaster transcripti... 30 2.4
BT010242-1|AAQ23560.1| 498|Drosophila melanogaster RE48016p pro... 30 3.1
AE013599-2858|AAF57577.1| 537|Drosophila melanogaster CG9811-PA... 30 3.1
AY071142-1|AAL48764.1| 572|Drosophila melanogaster RE17942p pro... 29 5.4
AF223064-1|AAF34687.1| 571|Drosophila melanogaster putative mic... 29 5.4
AE014297-195|AAF52059.2| 572|Drosophila melanogaster CG10229-PA... 29 5.4
AE014298-835|AAN09159.1| 944|Drosophila melanogaster CG5921-PB,... 28 9.5
>X13382-1|CAA31759.1| 407|Drosophila melanogaster protein (
Drosophila melanogastermRNA for put. ribosomal protein
L1. ).
Length = 407
Score = 221 bits (540), Expect = 7e-58
Identities = 106/182 (58%), Positives = 129/182 (70%)
Frame = +1
Query: 100 SIGSPTFSVGVFREERDGAGXQPSPSRFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEA 279
S+G+ V V+ E+ + A + VFKAPIRPD+VN+VH + +N+RQ Y VS+ A
Sbjct: 2 SLGNARPLVSVYTEKNEPAKDKNICLPAVFKAPIRPDVVNEVHQLLRRNNRQAYAVSELA 61
Query: 280 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXX 459
GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK +RRWH
Sbjct: 62 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTFRRWHRKVNVN 121
Query: 460 XXXXXXXXXXXXXXXXXXXQARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWS 639
Q++GH+I+ + E PLVV+D+VQ++ KTKQAVIFLRRLK W+
Sbjct: 122 QRRYALVSAIAASGVPALVQSKGHVIDGVSEFPLVVSDEVQKVQKTKQAVIFLRRLKIWA 181
Query: 640 DI 645
DI
Sbjct: 182 DI 183
Score = 30.7 bits (66), Expect = 1.8
Identities = 14/18 (77%), Positives = 16/18 (88%)
Frame = +2
Query: 95 MSLSVARPLVSVYSEKSE 148
MSL ARPLVSVY+EK+E
Sbjct: 1 MSLGNARPLVSVYTEKNE 18
>BT025959-1|ABG02203.1| 233|Drosophila melanogaster IP15855p
protein.
Length = 233
Score = 221 bits (540), Expect = 7e-58
Identities = 106/182 (58%), Positives = 129/182 (70%)
Frame = +1
Query: 100 SIGSPTFSVGVFREERDGAGXQPSPSRFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEA 279
S+G+ V V+ E+ + A + VFKAPIRPD+VN+VH + +N+RQ Y VS+ A
Sbjct: 2 SLGNARPLVSVYTEKNEPAKDKNICLPAVFKAPIRPDVVNEVHQLLRRNNRQAYAVSELA 61
Query: 280 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXX 459
GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK +RRWH
Sbjct: 62 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTFRRWHRKVNVN 121
Query: 460 XXXXXXXXXXXXXXXXXXXQARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWS 639
Q++GH+I+ + E PLVV+D+VQ++ KTKQAVIFLRRLK W+
Sbjct: 122 QRRYALVSAIAASGVPALVQSKGHVIDGVSEFPLVVSDEVQKVQKTKQAVIFLRRLKIWA 181
Query: 640 DI 645
DI
Sbjct: 182 DI 183
Score = 30.7 bits (66), Expect = 1.8
Identities = 14/18 (77%), Positives = 16/18 (88%)
Frame = +2
Query: 95 MSLSVARPLVSVYSEKSE 148
MSL ARPLVSVY+EK+E
Sbjct: 1 MSLGNARPLVSVYTEKNE 18
>AY069485-1|AAL39630.1| 401|Drosophila melanogaster LD21756p
protein.
Length = 401
Score = 221 bits (540), Expect = 7e-58
Identities = 106/182 (58%), Positives = 129/182 (70%)
Frame = +1
Query: 100 SIGSPTFSVGVFREERDGAGXQPSPSRFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEA 279
S+G+ V V+ E+ + A + VFKAPIRPD+VN+VH + +N+RQ Y VS+ A
Sbjct: 2 SLGNARPLVSVYTEKNEPAKDKNICLPAVFKAPIRPDVVNEVHQLLRRNNRQAYAVSELA 61
Query: 280 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXX 459
GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK +RRWH
Sbjct: 62 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTFRRWHRKVNVN 121
Query: 460 XXXXXXXXXXXXXXXXXXXQARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWS 639
Q++GH+I+ + E PLVV+D+VQ++ KTKQAVIFLRRLK W+
Sbjct: 122 QRRYALVSAIAASGVPALVQSKGHVIDGVSEFPLVVSDEVQKVQKTKQAVIFLRRLKIWA 181
Query: 640 DI 645
DI
Sbjct: 182 DI 183
Score = 30.7 bits (66), Expect = 1.8
Identities = 14/18 (77%), Positives = 16/18 (88%)
Frame = +2
Query: 95 MSLSVARPLVSVYSEKSE 148
MSL ARPLVSVY+EK+E
Sbjct: 1 MSLGNARPLVSVYTEKNE 18
>AE014297-4196|AAG22173.1| 401|Drosophila melanogaster CG5502-PA
protein.
Length = 401
Score = 221 bits (540), Expect = 7e-58
Identities = 106/182 (58%), Positives = 129/182 (70%)
Frame = +1
Query: 100 SIGSPTFSVGVFREERDGAGXQPSPSRFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEA 279
S+G+ V V+ E+ + A + VFKAPIRPD+VN+VH + +N+RQ Y VS+ A
Sbjct: 2 SLGNARPLVSVYTEKNEPAKDKNICLPAVFKAPIRPDVVNEVHQLLRRNNRQAYAVSELA 61
Query: 280 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXX 459
GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK +RRWH
Sbjct: 62 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTFRRWHRKVNVN 121
Query: 460 XXXXXXXXXXXXXXXXXXXQARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWS 639
Q++GH+I+ + E PLVV+D+VQ++ KTKQAVIFLRRLK W+
Sbjct: 122 QRRYALVSAIAASGVPALVQSKGHVIDGVSEFPLVVSDEVQKVQKTKQAVIFLRRLKIWA 181
Query: 640 DI 645
DI
Sbjct: 182 DI 183
Score = 30.7 bits (66), Expect = 1.8
Identities = 14/18 (77%), Positives = 16/18 (88%)
Frame = +2
Query: 95 MSLSVARPLVSVYSEKSE 148
MSL ARPLVSVY+EK+E
Sbjct: 1 MSLGNARPLVSVYTEKNE 18
>X06881-1|CAA29998.1| 123|Drosophila melanogaster protein (
Drosophila gene forribosomal protein L1 fragment. ).
Length = 123
Score = 172 bits (419), Expect = 3e-43
Identities = 79/121 (65%), Positives = 90/121 (74%)
Frame = +1
Query: 283 HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXX 462
HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK +RRWH
Sbjct: 1 HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTFRRWHRRVNVNQ 60
Query: 463 XXXXXXXXXXXXXXXXXXQARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSD 642
Q++GH+I+ + E PLVV+D+VQ++ KTKQAVIFLRRLK W+D
Sbjct: 61 RRYALVSAIAASGVPALVQSKGHVIDGVSEFPLVVSDEVQKVQKTKQAVIFLRRLKIWAD 120
Query: 643 I 645
I
Sbjct: 121 I 121
>BT010233-1|AAQ23551.1| 947|Drosophila melanogaster RE59472p
protein.
Length = 947
Score = 31.1 bits (67), Expect = 1.3
Identities = 22/69 (31%), Positives = 27/69 (39%)
Frame = +1
Query: 202 RPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAF 381
RP +D K+ P A T + S GTG A + GG +GQGA
Sbjct: 235 RPRAKSDAKRQKEKHLLDPSSADSSATSSTYSVSGGTGPATSSAAGGAGGAAAAAGQGAA 294
Query: 382 GNMCRGGRM 408
G GG M
Sbjct: 295 GG--AGGLM 301
>BT003626-1|AAO39629.1| 947|Drosophila melanogaster GH01416p
protein.
Length = 947
Score = 31.1 bits (67), Expect = 1.3
Identities = 22/69 (31%), Positives = 27/69 (39%)
Frame = +1
Query: 202 RPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAF 381
RP +D K+ P A T + S GTG A + GG +GQGA
Sbjct: 235 RPRAKSDAKRQKEKHLLDPSSADSSATSSTYSVSGGTGPATSSAAGGAGGAAAAAGQGAA 294
Query: 382 GNMCRGGRM 408
G GG M
Sbjct: 295 GG--AGGLM 301
>AY166752-1|AAN85714.1| 1400|Drosophila melanogaster loechrig
isoform I protein.
Length = 1400
Score = 31.1 bits (67), Expect = 1.3
Identities = 22/69 (31%), Positives = 27/69 (39%)
Frame = +1
Query: 202 RPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAF 381
RP +D K+ P A T + S GTG A + GG +GQGA
Sbjct: 688 RPRAKSDAKRQKEKHLLDPSSADSSATSSTYSVSGGTGPATSSAAGGAGGAAAAAGQGAA 747
Query: 382 GNMCRGGRM 408
G GG M
Sbjct: 748 GG--AGGLM 754
>AY070541-1|AAL48012.1| 1400|Drosophila melanogaster LD22662p
protein.
Length = 1400
Score = 31.1 bits (67), Expect = 1.3
Identities = 22/69 (31%), Positives = 27/69 (39%)
Frame = +1
Query: 202 RPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAF 381
RP +D K+ P A T + S GTG A + GG +GQGA
Sbjct: 688 RPRAKSDAKRQKEKHLLDPSSADSSATSSTYSVSGGTGPATSSAAGGAGGAAAAAGQGAA 747
Query: 382 GNMCRGGRM 408
G GG M
Sbjct: 748 GG--AGGLM 754
>AE014297-2948|AAF55864.2| 1400|Drosophila melanogaster CG17299-PF,
isoform F protein.
Length = 1400
Score = 31.1 bits (67), Expect = 1.3
Identities = 22/69 (31%), Positives = 27/69 (39%)
Frame = +1
Query: 202 RPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAF 381
RP +D K+ P A T + S GTG A + GG +GQGA
Sbjct: 688 RPRAKSDAKRQKEKHLLDPSSADSSATSSTYSVSGGTGPATSSAAGGAGGAAAAAGQGAA 747
Query: 382 GNMCRGGRM 408
G GG M
Sbjct: 748 GG--AGGLM 754
>AE014297-2944|AAF55860.2| 947|Drosophila melanogaster CG17299-PB,
isoform B protein.
Length = 947
Score = 31.1 bits (67), Expect = 1.3
Identities = 22/69 (31%), Positives = 27/69 (39%)
Frame = +1
Query: 202 RPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAF 381
RP +D K+ P A T + S GTG A + GG +GQGA
Sbjct: 235 RPRAKSDAKRQKEKHLLDPSSADSSATSSTYSVSGGTGPATSSAAGGAGGAAAAAGQGAA 294
Query: 382 GNMCRGGRM 408
G GG M
Sbjct: 295 GG--AGGLM 301
>AE014297-2943|AAN13851.1| 947|Drosophila melanogaster CG17299-PA,
isoform A protein.
Length = 947
Score = 31.1 bits (67), Expect = 1.3
Identities = 22/69 (31%), Positives = 27/69 (39%)
Frame = +1
Query: 202 RPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAF 381
RP +D K+ P A T + S GTG A + GG +GQGA
Sbjct: 235 RPRAKSDAKRQKEKHLLDPSSADSSATSSTYSVSGGTGPATSSAAGGAGGAAAAAGQGAA 294
Query: 382 GNMCRGGRM 408
G GG M
Sbjct: 295 GG--AGGLM 301
>AY113210-1|AAM29215.1| 872|Drosophila melanogaster AT06220p
protein.
Length = 872
Score = 30.7 bits (66), Expect = 1.8
Identities = 12/22 (54%), Positives = 14/22 (63%), Gaps = 1/22 (4%)
Frame = +3
Query: 315 TCCRPNSS-CPWWWYP*VRSGC 377
TCC P S+ CPW WY +GC
Sbjct: 718 TCCMPCSNQCPWSWYYNPCTGC 739
>AE014296-2188|AAF49882.2| 271|Drosophila melanogaster CG17666-PB,
isoform B protein.
Length = 271
Score = 30.7 bits (66), Expect = 1.8
Identities = 12/22 (54%), Positives = 14/22 (63%), Gaps = 1/22 (4%)
Frame = +3
Query: 315 TCCRPNSS-CPWWWYP*VRSGC 377
TCC P S+ CPW WY +GC
Sbjct: 117 TCCMPCSNQCPWSWYYNPCTGC 138
>AE014296-2187|AAN11857.1| 872|Drosophila melanogaster CG17666-PA,
isoform A protein.
Length = 872
Score = 30.7 bits (66), Expect = 1.8
Identities = 12/22 (54%), Positives = 14/22 (63%), Gaps = 1/22 (4%)
Frame = +3
Query: 315 TCCRPNSS-CPWWWYP*VRSGC 377
TCC P S+ CPW WY +GC
Sbjct: 718 TCCMPCSNQCPWSWYYNPCTGC 739
>S61883-1|AAB26991.2| 2068|Drosophila melanogaster transcription
factor TFIID 230kda subunit protein.
Length = 2068
Score = 30.3 bits (65), Expect = 2.4
Identities = 17/38 (44%), Positives = 22/38 (57%)
Frame = +1
Query: 100 SIGSPTFSVGVFREERDGAGXQPSPSRFVFKAPIRPDL 213
S+G P S G +ERD + SPSR FK ++PDL
Sbjct: 1312 SLGDPKSSGGHSHKERDSGYKEVSPSRKKFK--LKPDL 1347
>BT024196-1|ABC86258.1| 1964|Drosophila melanogaster RE63802p protein.
Length = 1964
Score = 30.3 bits (65), Expect = 2.4
Identities = 17/38 (44%), Positives = 22/38 (57%)
Frame = +1
Query: 100 SIGSPTFSVGVFREERDGAGXQPSPSRFVFKAPIRPDL 213
S+G P S G +ERD + SPSR FK ++PDL
Sbjct: 1309 SLGDPKSSGGHSHKERDSGYKEVSPSRKKFK--LKPDL 1344
>BT004888-1|AAO47866.1| 2096|Drosophila melanogaster RE74933p protein.
Length = 2096
Score = 30.3 bits (65), Expect = 2.4
Identities = 17/38 (44%), Positives = 22/38 (57%)
Frame = +1
Query: 100 SIGSPTFSVGVFREERDGAGXQPSPSRFVFKAPIRPDL 213
S+G P S G +ERD + SPSR FK ++PDL
Sbjct: 1309 SLGDPKSSGGHSHKERDSGYKEVSPSRKKFK--LKPDL 1344
>AE014297-491|AAF54102.3| 2065|Drosophila melanogaster CG17603-PA,
isoform A protein.
Length = 2065
Score = 30.3 bits (65), Expect = 2.4
Identities = 17/38 (44%), Positives = 22/38 (57%)
Frame = +1
Query: 100 SIGSPTFSVGVFREERDGAGXQPSPSRFVFKAPIRPDL 213
S+G P S G +ERD + SPSR FK ++PDL
Sbjct: 1309 SLGDPKSSGGHSHKERDSGYKEVSPSRKKFK--LKPDL 1344
>AE014297-490|AAS65117.1| 2098|Drosophila melanogaster CG17603-PC,
isoform C protein.
Length = 2098
Score = 30.3 bits (65), Expect = 2.4
Identities = 17/38 (44%), Positives = 22/38 (57%)
Frame = +1
Query: 100 SIGSPTFSVGVFREERDGAGXQPSPSRFVFKAPIRPDL 213
S+G P S G +ERD + SPSR FK ++PDL
Sbjct: 1309 SLGDPKSSGGHSHKERDSGYKEVSPSRKKFK--LKPDL 1344
>AE014297-489|AAS65116.1| 2129|Drosophila melanogaster CG17603-PB,
isoform B protein.
Length = 2129
Score = 30.3 bits (65), Expect = 2.4
Identities = 17/38 (44%), Positives = 22/38 (57%)
Frame = +1
Query: 100 SIGSPTFSVGVFREERDGAGXQPSPSRFVFKAPIRPDL 213
S+G P S G +ERD + SPSR FK ++PDL
Sbjct: 1309 SLGDPKSSGGHSHKERDSGYKEVSPSRKKFK--LKPDL 1344
>AE001572-25|AAD19815.1| 2065|Drosophila melanogaster transcription
factor protein.
Length = 2065
Score = 30.3 bits (65), Expect = 2.4
Identities = 17/38 (44%), Positives = 22/38 (57%)
Frame = +1
Query: 100 SIGSPTFSVGVFREERDGAGXQPSPSRFVFKAPIRPDL 213
S+G P S G +ERD + SPSR FK ++PDL
Sbjct: 1309 SLGDPKSSGGHSHKERDSGYKEVSPSRKKFK--LKPDL 1344
>BT010242-1|AAQ23560.1| 498|Drosophila melanogaster RE48016p
protein.
Length = 498
Score = 29.9 bits (64), Expect = 3.1
Identities = 19/64 (29%), Positives = 27/64 (42%), Gaps = 1/64 (1%)
Frame = -2
Query: 612 DDSLFGLVDLLDFVSYNQGKLGNLFNNVSSSLNERWDAGSSN-GCCQGRSPLSEVDATVP 436
D+ L GL+ + N K +LF S ++R N GC +PL + V
Sbjct: 392 DELLVGLLSQIRLKLENPEKSRDLFRKRSIRKSKRRACSPLNAGCLNANTPLGPLGEAVA 451
Query: 435 APPG 424
PPG
Sbjct: 452 TPPG 455
>AE013599-2858|AAF57577.1| 537|Drosophila melanogaster CG9811-PA
protein.
Length = 537
Score = 29.9 bits (64), Expect = 3.1
Identities = 19/64 (29%), Positives = 27/64 (42%), Gaps = 1/64 (1%)
Frame = -2
Query: 612 DDSLFGLVDLLDFVSYNQGKLGNLFNNVSSSLNERWDAGSSN-GCCQGRSPLSEVDATVP 436
D+ L GL+ + N K +LF S ++R N GC +PL + V
Sbjct: 431 DELLVGLLSQIRLKLENPEKSRDLFRKRSIRKSKRRACSPLNAGCLNANTPLGPLGEAVA 490
Query: 435 APPG 424
PPG
Sbjct: 491 TPPG 494
>AY071142-1|AAL48764.1| 572|Drosophila melanogaster RE17942p
protein.
Length = 572
Score = 29.1 bits (62), Expect = 5.4
Identities = 10/28 (35%), Positives = 15/28 (53%)
Frame = -3
Query: 374 P*PDLWVPPPRTRGIRATARPVPHDSAL 291
P PD+W PPP+ + +P P A+
Sbjct: 133 PDPDIWTPPPKDPDVWGPPKPPPTTQAV 160
>AF223064-1|AAF34687.1| 571|Drosophila melanogaster putative
microtubule severingprotein katanin p60 subunit protein.
Length = 571
Score = 29.1 bits (62), Expect = 5.4
Identities = 10/28 (35%), Positives = 15/28 (53%)
Frame = -3
Query: 374 P*PDLWVPPPRTRGIRATARPVPHDSAL 291
P PD+W PPP+ + +P P A+
Sbjct: 133 PDPDIWTPPPKDPDVWGPPKPPPTTQAV 160
>AE014297-195|AAF52059.2| 572|Drosophila melanogaster CG10229-PA
protein.
Length = 572
Score = 29.1 bits (62), Expect = 5.4
Identities = 10/28 (35%), Positives = 15/28 (53%)
Frame = -3
Query: 374 P*PDLWVPPPRTRGIRATARPVPHDSAL 291
P PD+W PPP+ + +P P A+
Sbjct: 133 PDPDIWTPPPKDPDVWGPPKPPPTTQAV 160
>AE014298-835|AAN09159.1| 944|Drosophila melanogaster CG5921-PB,
isoform B protein.
Length = 944
Score = 28.3 bits (60), Expect = 9.5
Identities = 15/33 (45%), Positives = 20/33 (60%), Gaps = 2/33 (6%)
Frame = +2
Query: 101 LSVARPLV--SVYSEKSETVQGCSQAPPVSCSR 193
+S+ RPLV S Y E+ ET++ S P SC R
Sbjct: 705 VSMGRPLVTMSTYQERGETLKRTSIMPDESCYR 737
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,568,517
Number of Sequences: 53049
Number of extensions: 665216
Number of successful extensions: 2441
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 2281
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2429
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2744900550
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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