Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP13_F_B14
(581 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L05093-1|AAC18781.1| 176|Homo sapiens ribosomal protein L18a pr... 187 2e-47
BC071920-1|AAH71920.1| 176|Homo sapiens ribosomal protein L18a ... 187 2e-47
BC066319-1|AAH66319.1| 176|Homo sapiens ribosomal protein L18a ... 187 2e-47
BC007512-1|AAH07512.1| 176|Homo sapiens ribosomal protein L18a ... 187 2e-47
AK222647-1|BAD96367.1| 176|Homo sapiens ribosomal protein L18a ... 187 2e-47
AC005796-1|AAC62828.1| 176|Homo sapiens ribosomal protein L18a ... 187 2e-47
AY779046-1|AAX47571.1| 136|Homo sapiens ribosomal protein L18a-... 143 4e-34
X80822-1|CAA56788.1| 140|Homo sapiens protein ( H.sapiens mRNA ... 142 8e-34
AB007175-1|BAA28596.1| 66|Homo sapiens ribosomal protein L18a ... 79 1e-14
BC031010-1|AAH31010.1| 428|Homo sapiens SMYD3 protein protein. 29 9.1
BC017079-1|AAH17079.2| 287|Homo sapiens SMYD3 protein protein. 29 9.1
AY186742-1|AAO31695.1| 258|Homo sapiens hypothetical protein FL... 29 9.1
AL512412-3|CAI14746.1| 428|Homo sapiens SET and MYND domain con... 29 9.1
AL512412-2|CAI14745.1| 258|Homo sapiens SET and MYND domain con... 29 9.1
AL512412-1|CAI14744.1| 239|Homo sapiens SET and MYND domain con... 29 9.1
AL445468-3|CAI16630.1| 428|Homo sapiens SET and MYND domain con... 29 9.1
AL445468-2|CAI16629.1| 258|Homo sapiens SET and MYND domain con... 29 9.1
AL445468-1|CAI16628.1| 239|Homo sapiens SET and MYND domain con... 29 9.1
AL358859-1|CAI15419.1| 428|Homo sapiens SET and MYND domain con... 29 9.1
AL356583-1|CAI16395.1| 428|Homo sapiens SET and MYND domain con... 29 9.1
AK024733-1|BAB14981.1| 369|Homo sapiens protein ( Homo sapiens ... 29 9.1
AB057595-1|BAB86333.1| 428|Homo sapiens histone methyltransfera... 29 9.1
>L05093-1|AAC18781.1| 176|Homo sapiens ribosomal protein L18a
protein.
Length = 176
Score = 187 bits (456), Expect = 2e-47
Identities = 94/159 (59%), Positives = 110/159 (69%)
Frame = +1
Query: 70 MKAKGQLREYEVIGRKLPFGERAQASLXIK*EFSLRIQLSPNLXFWYFLRQLKKFKKTTG 249
MKA G LREY+V+GR LP + L F+ ++ + FWYF+ QLKK KK++G
Sbjct: 1 MKASGTLREYKVVGRCLPTPKCHTPPLYRMRIFAPNHVVAKS-RFWYFVSQLKKMKKSSG 59
Query: 250 EIVXXXXXXXXXXXXXXNFGIWLRYESRSGVHNMYREYRDLSVGGAVTQCYXDMGAXHRA 429
EIV NFGIWLRY+SRSG HNMYREYRDL+ GAVTQCY DMGA HRA
Sbjct: 60 EIVYCGQVFEKSPLRVKNFGIWLRYDSRSGTHNMYREYRDLTTAGAVTQCYRDMGARHRA 119
Query: 430 RAHSIQIIKVEVIKAAACRRPQVKQFHNSTIRFPLPKRV 546
RAHSIQI+KVE I A+ CRRP VKQFH+S I+FPLP RV
Sbjct: 120 RAHSIQIMKVEEIAASKCRRPAVKQFHDSKIKFPLPHRV 158
>BC071920-1|AAH71920.1| 176|Homo sapiens ribosomal protein L18a
protein.
Length = 176
Score = 187 bits (456), Expect = 2e-47
Identities = 94/159 (59%), Positives = 110/159 (69%)
Frame = +1
Query: 70 MKAKGQLREYEVIGRKLPFGERAQASLXIK*EFSLRIQLSPNLXFWYFLRQLKKFKKTTG 249
MKA G LREY+V+GR LP + L F+ ++ + FWYF+ QLKK KK++G
Sbjct: 1 MKASGTLREYKVVGRCLPTPKCHTPPLYRMRIFAPNHVVAKS-RFWYFVSQLKKMKKSSG 59
Query: 250 EIVXXXXXXXXXXXXXXNFGIWLRYESRSGVHNMYREYRDLSVGGAVTQCYXDMGAXHRA 429
EIV NFGIWLRY+SRSG HNMYREYRDL+ GAVTQCY DMGA HRA
Sbjct: 60 EIVYCGQVFEKSPLRVKNFGIWLRYDSRSGTHNMYREYRDLTTAGAVTQCYRDMGARHRA 119
Query: 430 RAHSIQIIKVEVIKAAACRRPQVKQFHNSTIRFPLPKRV 546
RAHSIQI+KVE I A+ CRRP VKQFH+S I+FPLP RV
Sbjct: 120 RAHSIQIMKVEEIAASKCRRPAVKQFHDSKIKFPLPHRV 158
>BC066319-1|AAH66319.1| 176|Homo sapiens ribosomal protein L18a
protein.
Length = 176
Score = 187 bits (456), Expect = 2e-47
Identities = 94/159 (59%), Positives = 110/159 (69%)
Frame = +1
Query: 70 MKAKGQLREYEVIGRKLPFGERAQASLXIK*EFSLRIQLSPNLXFWYFLRQLKKFKKTTG 249
MKA G LREY+V+GR LP + L F+ ++ + FWYF+ QLKK KK++G
Sbjct: 1 MKASGTLREYKVVGRCLPTPKCHTPPLYRMRIFAPNHVVAKS-RFWYFVSQLKKMKKSSG 59
Query: 250 EIVXXXXXXXXXXXXXXNFGIWLRYESRSGVHNMYREYRDLSVGGAVTQCYXDMGAXHRA 429
EIV NFGIWLRY+SRSG HNMYREYRDL+ GAVTQCY DMGA HRA
Sbjct: 60 EIVYCGQVFEKSPLRVKNFGIWLRYDSRSGTHNMYREYRDLTTAGAVTQCYRDMGARHRA 119
Query: 430 RAHSIQIIKVEVIKAAACRRPQVKQFHNSTIRFPLPKRV 546
RAHSIQI+KVE I A+ CRRP VKQFH+S I+FPLP RV
Sbjct: 120 RAHSIQIMKVEEIAASKCRRPAVKQFHDSKIKFPLPHRV 158
>BC007512-1|AAH07512.1| 176|Homo sapiens ribosomal protein L18a
protein.
Length = 176
Score = 187 bits (456), Expect = 2e-47
Identities = 94/159 (59%), Positives = 110/159 (69%)
Frame = +1
Query: 70 MKAKGQLREYEVIGRKLPFGERAQASLXIK*EFSLRIQLSPNLXFWYFLRQLKKFKKTTG 249
MKA G LREY+V+GR LP + L F+ ++ + FWYF+ QLKK KK++G
Sbjct: 1 MKASGTLREYKVVGRCLPTPKCHTPPLYRMRIFAPNHVVAKS-RFWYFVSQLKKMKKSSG 59
Query: 250 EIVXXXXXXXXXXXXXXNFGIWLRYESRSGVHNMYREYRDLSVGGAVTQCYXDMGAXHRA 429
EIV NFGIWLRY+SRSG HNMYREYRDL+ GAVTQCY DMGA HRA
Sbjct: 60 EIVYCGQVFEKSPLRVKNFGIWLRYDSRSGTHNMYREYRDLTTAGAVTQCYRDMGARHRA 119
Query: 430 RAHSIQIIKVEVIKAAACRRPQVKQFHNSTIRFPLPKRV 546
RAHSIQI+KVE I A+ CRRP VKQFH+S I+FPLP RV
Sbjct: 120 RAHSIQIMKVEEIAASKCRRPAVKQFHDSKIKFPLPHRV 158
>AK222647-1|BAD96367.1| 176|Homo sapiens ribosomal protein L18a
variant protein.
Length = 176
Score = 187 bits (456), Expect = 2e-47
Identities = 94/159 (59%), Positives = 110/159 (69%)
Frame = +1
Query: 70 MKAKGQLREYEVIGRKLPFGERAQASLXIK*EFSLRIQLSPNLXFWYFLRQLKKFKKTTG 249
MKA G LREY+V+GR LP + L F+ ++ + FWYF+ QLKK KK++G
Sbjct: 1 MKASGTLREYKVVGRCLPTPKCHTPPLYRMRIFAPNHVVAKS-RFWYFVSQLKKMKKSSG 59
Query: 250 EIVXXXXXXXXXXXXXXNFGIWLRYESRSGVHNMYREYRDLSVGGAVTQCYXDMGAXHRA 429
EIV NFGIWLRY+SRSG HNMYREYRDL+ GAVTQCY DMGA HRA
Sbjct: 60 EIVYCGQVFEKSPLRVKNFGIWLRYDSRSGTHNMYREYRDLTAAGAVTQCYRDMGARHRA 119
Query: 430 RAHSIQIIKVEVIKAAACRRPQVKQFHNSTIRFPLPKRV 546
RAHSIQI+KVE I A+ CRRP VKQFH+S I+FPLP RV
Sbjct: 120 RAHSIQIMKVEEIAASKCRRPAVKQFHDSKIKFPLPHRV 158
>AC005796-1|AAC62828.1| 176|Homo sapiens ribosomal protein L18a
protein.
Length = 176
Score = 187 bits (456), Expect = 2e-47
Identities = 94/159 (59%), Positives = 110/159 (69%)
Frame = +1
Query: 70 MKAKGQLREYEVIGRKLPFGERAQASLXIK*EFSLRIQLSPNLXFWYFLRQLKKFKKTTG 249
MKA G LREY+V+GR LP + L F+ ++ + FWYF+ QLKK KK++G
Sbjct: 1 MKASGTLREYKVVGRCLPTPKCHTPPLYRMRIFAPNHVVAKS-RFWYFVSQLKKMKKSSG 59
Query: 250 EIVXXXXXXXXXXXXXXNFGIWLRYESRSGVHNMYREYRDLSVGGAVTQCYXDMGAXHRA 429
EIV NFGIWLRY+SRSG HNMYREYRDL+ GAVTQCY DMGA HRA
Sbjct: 60 EIVYCGQVFEKSPLRVKNFGIWLRYDSRSGTHNMYREYRDLTTAGAVTQCYRDMGARHRA 119
Query: 430 RAHSIQIIKVEVIKAAACRRPQVKQFHNSTIRFPLPKRV 546
RAHSIQI+KVE I A+ CRRP VKQFH+S I+FPLP RV
Sbjct: 120 RAHSIQIMKVEEIAASKCRRPAVKQFHDSKIKFPLPHRV 158
>AY779046-1|AAX47571.1| 136|Homo sapiens ribosomal protein
L18a-like protein protein.
Length = 136
Score = 143 bits (347), Expect = 4e-34
Identities = 74/136 (54%), Positives = 89/136 (65%)
Frame = +1
Query: 70 MKAKGQLREYEVIGRKLPFGERAQASLXIK*EFSLRIQLSPNLXFWYFLRQLKKFKKTTG 249
MKA G LREY+V+GR+LP + L F+ ++ + FWYF+ QLKK KK++G
Sbjct: 1 MKASGTLREYKVVGRRLPTPKCHTPPLYRMRIFAPNHVVAKS-RFWYFVSQLKKMKKSSG 59
Query: 250 EIVXXXXXXXXXXXXXXNFGIWLRYESRSGVHNMYREYRDLSVGGAVTQCYXDMGAXHRA 429
E V NFGIWLR +SRSG HNMYREYRDL+ GAVTQCY DMGA HRA
Sbjct: 60 ETVYCGQVFEKSPLRVKNFGIWLRCDSRSGTHNMYREYRDLTTAGAVTQCYRDMGARHRA 119
Query: 430 RAHSIQIIKVEVIKAA 477
RAHSIQI+ VE I A+
Sbjct: 120 RAHSIQIMMVEEIAAS 135
>X80822-1|CAA56788.1| 140|Homo sapiens protein ( H.sapiens mRNA for
ORF. ).
Length = 140
Score = 142 bits (344), Expect = 8e-34
Identities = 63/82 (76%), Positives = 69/82 (84%)
Frame = +1
Query: 301 NFGIWLRYESRSGVHNMYREYRDLSVGGAVTQCYXDMGAXHRARAHSIQIIKVEVIKAAA 480
NFGIWL Y+SRSG HNMYREYRDL+ GAVTQCY DMGA HRARAHSIQI+KVE I +
Sbjct: 41 NFGIWLSYDSRSGTHNMYREYRDLTTAGAVTQCYRDMGARHRARAHSIQIMKVEEIAVSK 100
Query: 481 CRRPQVKQFHNSTIRFPLPKRV 546
CRRP VKQFH+S I+FPLP RV
Sbjct: 101 CRRPAVKQFHDSKIKFPLPHRV 122
>AB007175-1|BAA28596.1| 66|Homo sapiens ribosomal protein L18a
protein.
Length = 66
Score = 79.0 bits (186), Expect = 1e-14
Identities = 36/47 (76%), Positives = 40/47 (85%)
Frame = +1
Query: 406 DMGAXHRARAHSIQIIKVEVIKAAACRRPQVKQFHNSTIRFPLPKRV 546
DMGA HRARAHSIQI+KVE I A+ CRRP VKQFH+S I+FPLP RV
Sbjct: 2 DMGARHRARAHSIQIMKVEEIAASKCRRPAVKQFHDSKIKFPLPHRV 48
>BC031010-1|AAH31010.1| 428|Homo sapiens SMYD3 protein protein.
Length = 428
Score = 29.5 bits (63), Expect = 9.1
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +1
Query: 334 SGVHNMYREYRDLSVGGAVTQCYXDM 411
+G H + R RD+ VG +T CY DM
Sbjct: 217 NGPHLLLRAVRDIEVGEELTICYLDM 242
>BC017079-1|AAH17079.2| 287|Homo sapiens SMYD3 protein protein.
Length = 287
Score = 29.5 bits (63), Expect = 9.1
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +1
Query: 334 SGVHNMYREYRDLSVGGAVTQCYXDM 411
+G H + R RD+ VG +T CY DM
Sbjct: 76 NGPHLLLRAVRDIEVGEELTICYLDM 101
>AY186742-1|AAO31695.1| 258|Homo sapiens hypothetical protein
FLJ21080 protein.
Length = 258
Score = 29.5 bits (63), Expect = 9.1
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +1
Query: 334 SGVHNMYREYRDLSVGGAVTQCYXDM 411
+G H + R RD+ VG +T CY DM
Sbjct: 47 NGPHLLLRAVRDIEVGEELTICYLDM 72
>AL512412-3|CAI14746.1| 428|Homo sapiens SET and MYND domain
containing 3 protein.
Length = 428
Score = 29.5 bits (63), Expect = 9.1
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +1
Query: 334 SGVHNMYREYRDLSVGGAVTQCYXDM 411
+G H + R RD+ VG +T CY DM
Sbjct: 217 NGPHLLLRAVRDIEVGEELTICYLDM 242
>AL512412-2|CAI14745.1| 258|Homo sapiens SET and MYND domain
containing 3 protein.
Length = 258
Score = 29.5 bits (63), Expect = 9.1
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +1
Query: 334 SGVHNMYREYRDLSVGGAVTQCYXDM 411
+G H + R RD+ VG +T CY DM
Sbjct: 47 NGPHLLLRAVRDIEVGEELTICYLDM 72
>AL512412-1|CAI14744.1| 239|Homo sapiens SET and MYND domain
containing 3 protein.
Length = 239
Score = 29.5 bits (63), Expect = 9.1
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +1
Query: 334 SGVHNMYREYRDLSVGGAVTQCYXDM 411
+G H + R RD+ VG +T CY DM
Sbjct: 28 NGPHLLLRAVRDIEVGEELTICYLDM 53
>AL445468-3|CAI16630.1| 428|Homo sapiens SET and MYND domain
containing 3 protein.
Length = 428
Score = 29.5 bits (63), Expect = 9.1
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +1
Query: 334 SGVHNMYREYRDLSVGGAVTQCYXDM 411
+G H + R RD+ VG +T CY DM
Sbjct: 217 NGPHLLLRAVRDIEVGEELTICYLDM 242
>AL445468-2|CAI16629.1| 258|Homo sapiens SET and MYND domain
containing 3 protein.
Length = 258
Score = 29.5 bits (63), Expect = 9.1
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +1
Query: 334 SGVHNMYREYRDLSVGGAVTQCYXDM 411
+G H + R RD+ VG +T CY DM
Sbjct: 47 NGPHLLLRAVRDIEVGEELTICYLDM 72
>AL445468-1|CAI16628.1| 239|Homo sapiens SET and MYND domain
containing 3 protein.
Length = 239
Score = 29.5 bits (63), Expect = 9.1
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +1
Query: 334 SGVHNMYREYRDLSVGGAVTQCYXDM 411
+G H + R RD+ VG +T CY DM
Sbjct: 28 NGPHLLLRAVRDIEVGEELTICYLDM 53
>AL358859-1|CAI15419.1| 428|Homo sapiens SET and MYND domain
containing 3 protein.
Length = 428
Score = 29.5 bits (63), Expect = 9.1
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +1
Query: 334 SGVHNMYREYRDLSVGGAVTQCYXDM 411
+G H + R RD+ VG +T CY DM
Sbjct: 217 NGPHLLLRAVRDIEVGEELTICYLDM 242
>AL356583-1|CAI16395.1| 428|Homo sapiens SET and MYND domain
containing 3 protein.
Length = 428
Score = 29.5 bits (63), Expect = 9.1
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +1
Query: 334 SGVHNMYREYRDLSVGGAVTQCYXDM 411
+G H + R RD+ VG +T CY DM
Sbjct: 217 NGPHLLLRAVRDIEVGEELTICYLDM 242
>AK024733-1|BAB14981.1| 369|Homo sapiens protein ( Homo sapiens
cDNA: FLJ21080 fis, clone CAS02449. ).
Length = 369
Score = 29.5 bits (63), Expect = 9.1
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +1
Query: 334 SGVHNMYREYRDLSVGGAVTQCYXDM 411
+G H + R RD+ VG +T CY DM
Sbjct: 158 NGPHLLLRAVRDIEVGEELTICYLDM 183
>AB057595-1|BAB86333.1| 428|Homo sapiens histone methyltransferase
protein.
Length = 428
Score = 29.5 bits (63), Expect = 9.1
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +1
Query: 334 SGVHNMYREYRDLSVGGAVTQCYXDM 411
+G H + R RD+ VG +T CY DM
Sbjct: 217 NGPHLLLRAVRDIEVGEELTICYLDM 242
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 79,140,771
Number of Sequences: 237096
Number of extensions: 1569275
Number of successful extensions: 3302
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 3180
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3288
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6042162242
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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